Amac023612.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421964.1:82151287-82156687[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 4.1 2.3e+02 3.8 1.3 2 23 48 70 47 70 0.93 2 20 0.17 9.1 8.2 4.3 1 23 186 209 186 209 0.95 3 20 0.24 13 7.7 6.9 1 23 218 240 218 240 0.97 4 20 0.16 8.6 8.3 5.6 2 23 250 271 249 271 0.97 5 20 0.00015 0.0084 17.7 3.7 1 23 280 302 280 302 0.97 6 20 0.46 25 6.8 1.3 2 23 312 333 311 333 0.97 7 20 0.0072 0.4 12.5 2.9 1 23 342 364 342 364 0.98 8 20 0.032 1.8 10.4 1.9 1 23 373 396 373 396 0.95 9 20 0.011 0.63 11.8 2.5 1 23 405 427 405 427 0.95 10 20 0.0059 0.33 12.7 2.7 1 23 436 459 436 459 0.97 11 20 0.0011 0.062 15.0 1.4 1 23 468 491 468 491 0.98 12 20 0.0067 0.37 12.6 3.2 1 23 503 525 503 525 0.98 13 20 1 57 5.7 1.4 1 20 534 553 534 556 0.87 14 20 0.026 1.4 10.7 2.4 1 23 565 588 565 588 0.96 15 20 0.00057 0.031 15.9 0.8 2 23 598 620 597 620 0.94 16 20 0.0054 0.3 12.8 1.4 3 23 634 654 632 654 0.96 17 20 0.0093 0.51 12.1 4.4 1 23 663 685 663 685 0.98 18 20 2 1.1e+02 4.8 5.5 1 23 694 717 694 717 0.95 19 20 4.1e-05 0.0022 19.5 1.9 1 23 724 746 724 746 0.98 20 20 4.8 2.6e+02 3.6 4.2 1 23 755 778 755 778 0.94
Sequence Information
- Coding Sequence
- ATGTGCGACAAATGTCCGTACAGGAGCATAGACAACACCGGTTTGAAGCGGCTCATGAAGCAGCATGCCGTCGAACAGTTCGCGTGCGATAAGTGCTCGTTCACTTATCAGACACAAGTTGAAATCACACAAAAAGAACTGAAGTGCCCGAAATGTTCGTACGAGTCTGATTTGAAGATCCAACTCGACCACCACTTCCAGAGGGCACACGTAAATGTTTATGCCGCCGAATTGTTCCATGGCATCGTCGAACCGGAGGAATTTAAATGCAACAGCTGCAGTTTCAAGTGTTACTACAAGTGGGATCTGAGTGAACACTGTAAACTACAGCATCACGGCCGGGCTGAAGAAGAGAATTCGAAAGAAGGTTCATTTTGCAACGAAGCAATCGACAAGTATTGTTGCAGCCACGGCAATTGCAGATTCGAAACGGATTCCAGTTTACTGCTCATCAAGCACATTGATTCGTGTGAATTGGCGACGACGCGAGAAAACGCCAAATCACAGGCGGTTTCGATTGCAACACATCTTGATGATTTGAGTAAGAACAAAAGTTACGCATGTTCGcattgttcgtttcgaagtagatttaaaaaaaatgtcaagagGCACATCAACGGAAAACATGCCAAGgatgaagaaattgaatggtTTTGTTGTGACAAATGTACGTTCAGAACCAAGCAAAAAGGGTACTTGAAATCGCACAAGATGCGACACGTCCCCGAAAATGAAATCGATTGGATTACATGCAAGCAGTGTTCATATAAAGCCAAAAcgaaaaattgtttgaaaaatcaCTTGAAACGTCATGCCAGCGATGCTGATTTGAACTGGTTCATGTGCCACAATTGTTCGTATAAAACCACACGAAAAGGTAATTTGAGAGCCCACATGATGCAACACGCAAGGAATGAAGAAATCGAATGGACCACTTGCAGCAAGTGTTCTTTCAGAGCGAGAAAAAAGGGTGTTTTGAAAGGGCACATGTTGACGCACGCCACGAGTGACGAAATCGATTGGTTTTCTTGCGCGAAATGTTCGTACAGAGCCAAGTTCAAGAACActctgaaaaggcacatgttgacgcACGCCGCAAGTGACGAAATCACTTGGTTCCCTTGCTCGAAGTGTTCGTACAGAGCCAAGGTTAAGAGCACTCTAAAAAATCACTATATGTTGAAGCATGCCGCGGCCGACGAGGTCAATTGGTTCAAGTGTAACGATTGTTCATTCAAAAGCAAAGAAAAAGGCAACCTGAAAAAGCACTCGTTGCTACATGTTAAGGACGAAGAAGTCGATTGGTACCCGTGCACCAAATGTTTGTTCAGAACAAAACATAGAGGCTCTTTGAATGCGCACATGAAGGTTAAGCACACGGCAAGTGAAGACATCACTTGGTTCACGTGCAACAAGTGCCCTTACAAGGTGAAACTGAAATGGAGTTTGAATGTACACATGAAGCGGCAGCACGTCCCTGATGTGAAAGACGAAGAAATTGTATGGTTCACGTGCACCGAGTGCTCCTACAAAACCAAACTAGAACAAtacttgaaaaggcacatgacGACACACGACACGAGCAAAAACGTCAAATGGTTCATGTGCAACAATTGCCCGTTCAAAACCAAGCACAAGTCCAGCTTGGGACCGCACATGTGGCGGCATGCCAGAAGCGAAGATATTGTTTGGTACAACTGCCTCGAGTGCTCACACAGGGCCAAAAGCCAAAAGAATCTGAAGAAACACGTGCTGGTGAGGCACACCAGCAGCGATAAAATCGAATGGTTGCAGTGCCCCGAATGCCCGCACAAATCCAAAACGAAAGGCAACTTGACGGTACACATCACGAATATGCACACCCCGAAAGACCAACTGGTCAAACCTCAATTGATCGCGTGCGCCACGTGTGACTTTACAACCATACATCGGTGGAgcctgaaaaagcacatgcTGCGGCACGTCGCCGACGACCAGATCGACTGGTTCACGTGCGAcaagtgttcgtaccgagccaaagagAAGTGCAACCTGAAAAGGCACATGGTAACTCACGCCACCGGCGCAGAAATCGAGTGGCATGCGTGTGGAACGTGCTCGTTCCAGACCAAGCACAAGAAAGGTCTGAAACAGCACGTCAAGCGGCAGCACGACTCTGATATCGAATGGTTCCCGTGCGACAAGTGTTCGTACCGATCCAACCAGAAAAGCAATCTAAAGAGCcacatgctgacgcacgccACCGGCGCAGAAATCGTGTGGCACGCGTGCGAATTGTGCTCATTTCAGACCAAGCACAAGGACTATATGGAAACGCACGTCAAGCAGCAGCACGGTTCCGAAAACGACTTGTTCTTATGCCACAGAAGTGCTCCTTCCGCTCCAAAAGTCAGTTCAATCTGA
- Protein Sequence
- MCDKCPYRSIDNTGLKRLMKQHAVEQFACDKCSFTYQTQVEITQKELKCPKCSYESDLKIQLDHHFQRAHVNVYAAELFHGIVEPEEFKCNSCSFKCYYKWDLSEHCKLQHHGRAEEENSKEGSFCNEAIDKYCCSHGNCRFETDSSLLLIKHIDSCELATTRENAKSQAVSIATHLDDLSKNKSYACSHCSFRSRFKKNVKRHINGKHAKDEEIEWFCCDKCTFRTKQKGYLKSHKMRHVPENEIDWITCKQCSYKAKTKNCLKNHLKRHASDADLNWFMCHNCSYKTTRKGNLRAHMMQHARNEEIEWTTCSKCSFRARKKGVLKGHMLTHATSDEIDWFSCAKCSYRAKFKNTLKRHMLTHAASDEITWFPCSKCSYRAKVKSTLKNHYMLKHAAADEVNWFKCNDCSFKSKEKGNLKKHSLLHVKDEEVDWYPCTKCLFRTKHRGSLNAHMKVKHTASEDITWFTCNKCPYKVKLKWSLNVHMKRQHVPDVKDEEIVWFTCTECSYKTKLEQYLKRHMTTHDTSKNVKWFMCNNCPFKTKHKSSLGPHMWRHARSEDIVWYNCLECSHRAKSQKNLKKHVLVRHTSSDKIEWLQCPECPHKSKTKGNLTVHITNMHTPKDQLVKPQLIACATCDFTTIHRWSLKKHMLRHVADDQIDWFTCDKCSYRAKEKCNLKRHMVTHATGAEIEWHACGTCSFQTKHKKGLKQHVKRQHDSDIEWFPCDKCSYRSNQKSNLKSHMLTHATGAEIVWHACELCSFQTKHKDYMETHVKQQHGSENDLFLCHRSAPSAPKVSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00078965;
- 90% Identity
- -
- 80% Identity
- -