Amac034313.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anaspis maculata
Gene Symbol
-
Assembly
GCA_949128115.1
Location
OX421967.1:10367000-10381139[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.066 3.6 9.4 3.1 1 23 163 186 163 186 0.96
2 25 0.44 24 6.8 5.0 1 19 195 213 195 213 0.97
3 25 0.057 3.1 9.6 2.6 2 23 228 249 227 249 0.96
4 25 6.4e-05 0.0035 18.9 1.8 1 23 258 280 258 280 0.97
5 25 6.4 3.5e+02 3.2 3.3 1 23 288 310 288 310 0.97
6 25 0.12 6.7 8.6 7.2 2 23 320 341 320 342 0.94
7 25 0.00078 0.043 15.5 1.4 1 23 351 373 351 373 0.97
8 25 0.0029 0.16 13.7 1.2 1 23 382 404 382 404 0.97
9 25 0.17 9.4 8.1 1.6 1 23 413 435 413 435 0.98
10 25 0.16 9 8.2 1.2 2 23 451 473 450 473 0.95
11 25 0.4 22 7.0 1.0 1 20 540 559 540 561 0.95
12 25 3.9 2.2e+02 3.8 0.4 1 23 581 604 581 604 0.93
13 25 0.37 21 7.1 0.3 2 23 614 638 613 638 0.93
14 25 0.038 2.1 10.2 0.9 1 23 647 670 647 670 0.97
15 25 0.026 1.4 10.7 1.5 1 23 679 702 679 702 0.96
16 25 0.16 8.8 8.2 0.8 1 23 712 735 712 735 0.95
17 25 0.062 3.4 9.5 1.9 2 23 745 769 744 769 0.93
18 25 0.00057 0.032 15.9 2.4 1 23 778 800 778 800 0.98
19 25 0.011 0.58 11.9 1.0 1 23 806 829 806 829 0.96
20 25 0.029 1.6 10.5 3.5 1 23 838 860 838 860 0.91
21 25 0.16 8.6 8.3 2.8 1 23 869 891 869 891 0.96
22 25 0.00069 0.038 15.7 4.4 1 23 900 922 900 922 0.99
23 25 0.011 0.59 11.9 1.2 2 23 964 986 964 986 0.95
24 25 0.0043 0.24 13.2 2.2 1 23 1024 1047 1024 1047 0.96
25 25 0.4 22 7.0 4.7 1 23 1056 1078 1056 1079 0.96

Sequence Information

Coding Sequence
ATGGCTATTTTATCTCAAAGGTTAGAACCGTTCGACGCTGAGGCTGCTTATGGGTGTACGCAATGTTCGTTCGAGGCACTTTGGCCCTTCCAGCTGGACCGTCATATCGAAAGGAATCACCAAAATGTTCATTTTCGCCAACTAATCAACGCCACCGCAGAACCGGAACCATATTATTGCATTTTTTGTGTCGGTTTCGAGACTTTCTACAAGCTTGCCCATTATGAACACTGCAATAGCGAACACAATGCTGTGAAAATTGAAAGTCCTTCCAATGAATTGGACAGTAGTTATCGTTGCGACGATTGCAAATACGAATGGCATTCAAGTTTACTTCTTGCTAAACATGGTCCTTGTGAAGTAGTGCCCAGAGGTGAACTATCAGATGCCGGTCGATCATCTTATGTCAACAGTGGTCAGTGTTCATACAGTGGCACGAATAGATCAGATGAGCAAAATTTGGCTCAAGTGTCCGAAGTTGCTTGGTTTCATTGCGCCAAATGTTCGTATCGGGCCAAGCGAAAACGCAGCTTGAGAGACCACATCCAAATAACGCACGCTGCAGCCGAGAAAATCGTCTGGTTCAACTGCACCAAATGTTCATACCGCACCAAACGCAAACAGCACTTGAAAACGCACGACGTGGTGAAACACGCTACGGATGACGAAATCGACTGGTGGTATTGCACCAAATGCCCTCATAGGGCCAAACTGAAAAATTCCTTGACAAAGCACATGCTGTCGCACGCCACTGCCGAAGACATCCGCTGGTTCGATTGCACcgagtgttcgtaccgagccaagcaAAAAGGCAATTTGAACAAGCATATGCGCAGACACGCCATCAAAGCGGTAACGTGGTTCAATTGCACGCAGTGTTCGTATCGGGCCGTAGAAAGCTACTACCTGAAATGCCACATGTTGACTCACGCCGCGGACGACGAAATCGACTGGGCCTACTGCACCGAATGTTCGTACCGTTGCAAGCAGAAAAAGTACTTGAAAACGCACGTTTTGAAGCACCACGCCGCGCGCATTGACGTCAGCTGGTTCGACTGTACCGAATGCTCTTATCGTGCCAATAAAAAGGGAAACTTGAGGAGACACATGCTGAGGCACGCCGCAGCTGAGGAGGTCGTCTGGTTCGATTGTACCGAGTGCTCGTTTCGATCGAAACGGGCGGACATGTTGAAGAAGCACGTGCTGACACACGCAACGGGCGAAGAAAGAGTGTTGTTCAAGTGTGACCAATGTTCTTATCAAGTCAAAGGGAAAAAGTACTGGGAAATGCACATGTCGAAGCATATCTACAGACTAAACATGGACAATCCAAGTCCTGATGCTCTGCAGCCATGTCTACAGTGTTCGTACGCATTCCAATCAAAGTTTCAACTCGACCATCATGTGCAAAGGGCCCACAAAAACGTGTACGCAGCCGAATTGTTCCATGCCATCGTAGAACCTGAACAATTCTCTTGCGCCAGTTGCACTTTCAAGAGTTACTACAACTGGCACTTGAAAGAACATTGCAAATTCCAACACCATGCTAAGATCAATGAGGACAGGAGTAATGAGGTCAACATCGAACAAGATTTATTCTGCGACGAAGTCGAGAAGTACACTTGTGATTATTGCAAATACCCGTCAAATTCGAGTTTGACCTTCACAAAACACACTGATCTATGTGAAATGGTGCCGAAATCGAATACAAACGTGGTAGACCCGACGGCGTCTAGACCCTTCGAGTGCTCTGAGTGTTCGTACAAAGCCAAGATCAGAAGACGTTTGCAGTTGCACGTGCTTTCAGTACATGCCAAAGATGACGAAATAAATTGGATCGAATGCCCCAAGCCCAAGTGTTCGTACAAGGCCAAGATAACGTCGTACTTGACCAAGCATATGGCCACGCAGCATGCGAAAGATGAGAAAATAGTTTGGTTCAAATGTGTCGAATGTTCGTTCAAGACCAAGTTCAAAGCTAATTTGGACCAGCACATTTTGGTTAGTCACACTACGATTCGAGACGCCGACTGGTTTCGATGTGCCAAATGCCCGTACCGTACCAAGATTAGGGGTAACTTGACGCAACATATTTTTAGAAAACATACCGCGGCCGAAGACGTAGTAAATTGGTACGAATGTGCCAAGTGTCCGTTTAGAACCAAATACAAGAAAAGTTTGGCGGGTCACTTGTTATACCAACACGCGAACATCGACGAAATCCAATGGTTGAAATGTAAAGAAACGGAGTGTTCGTTCAAGACCAAGCGCAAATCCGATTTAAAATCGCATGTGCTGTATCAGCACGTTGCGAGCGAAGCTATCAATTGGTTCAAATGTGTCAAGTGTTCGTATCGAACCAAACGCAAATCTGCTTTGAAAGTCCACATggtaaaacacgaaaaaagcaACAAGTTTGCATGTACGAAATGTCCATTCACAACCGGTTACAGTGGAAGCTTGAGACAACATATGTCGCGTAGACACGCCACGGACGATGAAGTCGATTGGTTTTCGTGCACCAAATGTCCGTACAAAACCAGACACAGATCCGATCTGACCAGTCACTCGGTGCAACATGCCAGTGACGAAGAAATTCGTTGGCACCCGTGCAACAAATGTTCGTACAGAGCCAAACTCAAAAACAGTTTGACCACTCACATGTTACAGCACGTCGACAGCGAAGAAGTCGTTTGGTACACGTGCTCTGAATGTCCTCACAGGACCAAACATAAGTACAATTTGGATGTGCACATGTTGACGCACCGTGCCCTCGAAGAAACGAACTCGTTCACGTGCGCCGATTGTTCGTTCACGACCAAATACAAGTACAGTTTGAAATGCCACATGTTGCACAAACATGCCGGCAAAGTGGACATCGATTGGGCCGTGTGCACCGAATGTCCATACAAAAGTAAAACCAAGAATGGATTGAGAAAACACGTCAAGCTCAAACACTGCTCGGAGGTAAAGTGGTTCCAATGTTCAAAGTGTTCGTTTAAAACGAAATATGGGCGTAGTGGGCTGAAAACGCACAACAAACTGAAGCATGTTAAAAATCTCGATTCGTTCAGTTGCACCGAGTGTTCATCCACGTTCAAAACTGAAGCTTATATGAAAAGCCACATGAAGCTCAAACATCGCACGGATGAAGAAACAAAGTGGTTCAAATGTGCGAGGTGTTCGTTCAGGTCGAAATACAAATCTTCTTTGATATCGCACAACATGACACATCACGCCGTACCTACCCCTAAATGA
Protein Sequence
MAILSQRLEPFDAEAAYGCTQCSFEALWPFQLDRHIERNHQNVHFRQLINATAEPEPYYCIFCVGFETFYKLAHYEHCNSEHNAVKIESPSNELDSSYRCDDCKYEWHSSLLLAKHGPCEVVPRGELSDAGRSSYVNSGQCSYSGTNRSDEQNLAQVSEVAWFHCAKCSYRAKRKRSLRDHIQITHAAAEKIVWFNCTKCSYRTKRKQHLKTHDVVKHATDDEIDWWYCTKCPHRAKLKNSLTKHMLSHATAEDIRWFDCTECSYRAKQKGNLNKHMRRHAIKAVTWFNCTQCSYRAVESYYLKCHMLTHAADDEIDWAYCTECSYRCKQKKYLKTHVLKHHAARIDVSWFDCTECSYRANKKGNLRRHMLRHAAAEEVVWFDCTECSFRSKRADMLKKHVLTHATGEERVLFKCDQCSYQVKGKKYWEMHMSKHIYRLNMDNPSPDALQPCLQCSYAFQSKFQLDHHVQRAHKNVYAAELFHAIVEPEQFSCASCTFKSYYNWHLKEHCKFQHHAKINEDRSNEVNIEQDLFCDEVEKYTCDYCKYPSNSSLTFTKHTDLCEMVPKSNTNVVDPTASRPFECSECSYKAKIRRRLQLHVLSVHAKDDEINWIECPKPKCSYKAKITSYLTKHMATQHAKDEKIVWFKCVECSFKTKFKANLDQHILVSHTTIRDADWFRCAKCPYRTKIRGNLTQHIFRKHTAAEDVVNWYECAKCPFRTKYKKSLAGHLLYQHANIDEIQWLKCKETECSFKTKRKSDLKSHVLYQHVASEAINWFKCVKCSYRTKRKSALKVHMVKHEKSNKFACTKCPFTTGYSGSLRQHMSRRHATDDEVDWFSCTKCPYKTRHRSDLTSHSVQHASDEEIRWHPCNKCSYRAKLKNSLTTHMLQHVDSEEVVWYTCSECPHRTKHKYNLDVHMLTHRALEETNSFTCADCSFTTKYKYSLKCHMLHKHAGKVDIDWAVCTECPYKSKTKNGLRKHVKLKHCSEVKWFQCSKCSFKTKYGRSGLKTHNKLKHVKNLDSFSCTECSSTFKTEAYMKSHMKLKHRTDEETKWFKCARCSFRSKYKSSLISHNMTHHAVPTPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-