Amac034049.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421967.1:6663567-6665669[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.41 23 6.9 2.7 1 23 5 28 5 28 0.96 2 18 0.0011 0.062 15.0 1.2 1 23 148 171 148 171 0.97 3 18 0.0013 0.073 14.8 1.8 1 23 177 199 177 199 0.96 4 18 1.7 91 5.0 5.8 1 23 208 231 208 231 0.95 5 18 0.00085 0.047 15.4 1.6 1 23 271 293 271 293 0.98 6 18 0.0064 0.35 12.6 7.2 1 23 302 324 302 324 0.98 7 18 0.022 1.2 10.9 7.6 1 23 333 355 333 356 0.95 8 18 0.0005 0.027 16.1 0.8 2 23 366 387 365 387 0.97 9 18 0.00042 0.023 16.3 2.7 2 23 397 418 396 418 0.97 10 18 0.00095 0.052 15.2 3.1 1 23 427 449 427 449 0.98 11 18 0.001 0.057 15.1 2.3 2 23 459 480 458 480 0.97 12 18 0.003 0.16 13.7 3.3 1 23 489 511 489 511 0.97 13 18 0.0015 0.085 14.6 1.7 1 23 520 542 520 542 0.97 14 18 6.9e-05 0.0038 18.8 7.9 1 23 551 573 551 573 0.99 15 18 0.027 1.5 10.7 4.4 1 23 582 605 582 605 0.96 16 18 0.00083 0.046 15.4 3.2 1 23 614 636 614 636 0.98 17 18 0.0073 0.4 12.4 1.9 2 23 644 665 643 665 0.97 18 18 0.043 2.3 10.0 4.2 1 23 674 697 674 697 0.93
Sequence Information
- Coding Sequence
- ATGGCGGAGATACATCGGTGTTCACAATGCTCATCCGAGTTTGAATTGAAGATCCAACTGGAACACCACGTTCAAAGAGCACACAAAAATGTTTACGCGgcagaactgttccatgccatcgtGGAACCGGAGCAGTTCACCTGCATTTACTGCGAATTCAAGGCCTATCACAATtgggacttgtacgaacactgcaaacacaaGCATGACGTCCGGATCGACGAGGACACAGAGCAAGCCTCATTTTGCGACGAAGAAAACGATAATTATCTTTGCGATTATTGCCAGTTCAAATCGGATTCAGGTTTGTCTCTCGTGAAACACGTATGTAAAATGACACAGAGGCTCACAGTCAATCTTGTGAGGCTACCCATCAATCTGACCCCGCTTCCAGTGGCGTCCGAATCAAATAATCGAGGTGTTATCTGCGAGAAAAAACACTTCAGCTGTACGAAGTGTTCATACAAAGTGCGAAGCGAAGCGGCGTTGAAGAGGCACATATCAACGAAACATACAGACGTGTATCGGTTTGCATGCAGCGTGTGTTCTTACAGAGCCAAACGGAACGATCATTTGAAATCGCACATGTTGTTGCATACAGCTGATGAAGATATTGAATGGTTTCATTGTAAGAAgtgttcattcaaaaccaaaCTGAAAAGTGGTTTGATGTCACATTATAAGCTGAGACATACGACCAATGCAGAGATAAATTGGTTTCACTGTGCAAATTGTTCATACAGGTGCAAAGtcaaatgccgtttgaaagagCACATGTTGCATCATCACACTTCCGAAAATATTGTCTGGTTCAAATGTGCCAAGTGTCCGTATAAAGCCAAACAGAAGTCGTATCTGAGCAAGCACGTTTTAACGCACGTTCCAAGCGAAAGCATTGATTGGTTCCACTGTACTAAGTGTTCGCACAAAACCAAGCAAAGCTATCTCTTGGAGAGACACATGCTGACGCACGCTTCCAATAAAGCCATCGACCAGTTCCAGTGCGCAAAGTGTCCATATAAAACCACACACAAACATAATTTAAAAGCTCATAATTTACGGCATCATGCGTCCAGCGAAGAAATCGTTTGGTTGAGGTGTGCTAAATGCCCGTTCAAAACTCGAAACAAACCAGGCTTGAAAGTGCACATGCGAACACATGTTTCCATAGGGGACATCGAATGGATTCAATGTGTCTTATGTCCGATTCGACTTAAACACAAGAGTCACTTGAAAGCACACATGATGCGACACGCTTCCGCCGAAGATATCAAGTGGTTCAGCTGCgcgaagtgttcgtataaagCCAAACGAAAGGCGCATTTGGAAACGCACATGCAGACGCATGCTTCCGacgaagacatcgattggtcgCAATGTGCAAAGTGTCCGTACAAAACTAGACAGAAACACGGTCTGAAAATACACATGTTGACGCATGCATCTGATAAAGAGATCGAATGGTTTTACTGTGCAAACTGTCCATATAAATGCAAACAGAAACCcagtttgaaaacgcacatgttgcaGCACACTTCTTCCGAAAACATAAATTGGTTCGCATGTGCCAAGTGTCCCTATAAAACCAAACAGAAGGCGCATCTAAAGCTGCACGTTTTAACGCACGCTCGCAGCGAAAGCatcgattggttccaatgtgccAAGTGTTCGCACAAATTCAAGCAAAAGTCGcacttgaaaacgcacatgctgacgcacgcTTCCAGCGAAGCCGTCGACTGGTTTCATTGTGCGAAGTGTACGTACAAGGCCAGGCAGAAAGTGAATTTGAATAGACACTATAGGCTGAAGCACACGTCCAGCGAAGATATCGTTTGGTTTAGCTGCGATAAATGTTCCTTCAAGACAGCGCTCAAGTCGAACTTGAAGAAGCACATGCAAAAACACGCTTCCAGTGAAGAATCTGTACAATGTGCCGTATGTTCGCTTCGGCTCAAACACAGGGACTACTTGAAAacacacatgttgaaacacgcttCCGACGAAGACATCAGGTGGTTCAAGTGCGAGAAGTGTTCGTACAAGGCCAAACGGAAGGCGCATCTGAGAAGCCACAACATGCTGAAACATGCTTCAAGGTAA
- Protein Sequence
- MAEIHRCSQCSSEFELKIQLEHHVQRAHKNVYAAELFHAIVEPEQFTCIYCEFKAYHNWDLYEHCKHKHDVRIDEDTEQASFCDEENDNYLCDYCQFKSDSGLSLVKHVCKMTQRLTVNLVRLPINLTPLPVASESNNRGVICEKKHFSCTKCSYKVRSEAALKRHISTKHTDVYRFACSVCSYRAKRNDHLKSHMLLHTADEDIEWFHCKKCSFKTKLKSGLMSHYKLRHTTNAEINWFHCANCSYRCKVKCRLKEHMLHHHTSENIVWFKCAKCPYKAKQKSYLSKHVLTHVPSESIDWFHCTKCSHKTKQSYLLERHMLTHASNKAIDQFQCAKCPYKTTHKHNLKAHNLRHHASSEEIVWLRCAKCPFKTRNKPGLKVHMRTHVSIGDIEWIQCVLCPIRLKHKSHLKAHMMRHASAEDIKWFSCAKCSYKAKRKAHLETHMQTHASDEDIDWSQCAKCPYKTRQKHGLKIHMLTHASDKEIEWFYCANCPYKCKQKPSLKTHMLQHTSSENINWFACAKCPYKTKQKAHLKLHVLTHARSESIDWFQCAKCSHKFKQKSHLKTHMLTHASSEAVDWFHCAKCTYKARQKVNLNRHYRLKHTSSEDIVWFSCDKCSFKTALKSNLKKHMQKHASSEESVQCAVCSLRLKHRDYLKTHMLKHASDEDIRWFKCEKCSYKAKRKAHLRSHNMLKHASR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -