Amac001144.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421961.1:10264166-10265875[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.037 2 10.2 3.4 1 23 127 149 127 149 0.97 2 14 0.00072 0.04 15.6 0.8 1 23 158 180 158 180 0.98 3 14 0.00036 0.02 16.5 3.6 1 23 189 211 189 211 0.98 4 14 0.0018 0.097 14.4 1.7 1 23 220 242 220 242 0.97 5 14 0.0014 0.079 14.7 1.4 1 23 251 273 251 273 0.98 6 14 0.0056 0.31 12.8 0.5 1 23 282 304 282 304 0.97 7 14 0.0002 0.011 17.4 1.6 1 23 313 335 313 335 0.97 8 14 1.6e-05 0.00088 20.8 2.2 2 23 349 370 348 370 0.96 9 14 3.3e-05 0.0018 19.8 1.4 1 23 379 401 379 401 0.98 10 14 0.91 50 5.8 7.5 1 23 410 432 410 432 0.96 11 14 0.0054 0.3 12.9 0.2 1 23 445 467 445 467 0.98 12 14 4.1e-05 0.0023 19.5 2.6 2 23 483 504 482 504 0.96 13 14 1.6e-05 0.00088 20.8 1.1 1 23 513 535 513 535 0.98 14 14 0.17 9.3 8.2 3.7 1 23 544 566 544 566 0.97
Sequence Information
- Coding Sequence
- ATGGACGAAGCAACAGTCTGTTGTGCGCAATGTTCGCACCGAGCAGTATGGCCATTCCAACTCGACCGTCATATCCAGAAGAACCACCGAGTTGTCGACGAAACCGAAATGTACCTAGCCATTATGGAACCGGAGCGACCGGAACGGTATTCTTGCATTCGTTGCGATTTCAAAACTTTCTTCAAAATCGCCTTATACGAACATTGCGTCAAGGCACACGAAGCTGGAATTGAAGACGGAAATCGTCGGCTCAGTGATGAATTTGTGCAATATCCTTGTGGAAGCTGCGAGTACGAAGCACATTTCAGTTTGTCTTTTATCAAACATCGCACTGAAACAGTGCACGATGTGGTGGATAGTTCAACGGAAAGGAGAAGTTTCCAGTGCTTGGATTGCCCGTACAAAAGCAGAACGAAAGGATGTTTGAAAATGCATTCGCTGCGGCATCTCCCGCCCGAACAAAGCAAGTGCTTCAGTTGTACCGTGTGTTCGTATCGTGCGAGGACGAAAGGAGACGTGACCAGgcacatgctgacgcacgccCCGGCCGATTTGGTCAACCGATTCAGTTGCACGGAATGTTCGTACCAAGCCAAGCGAAAAGAACACTTGAAGAACCACATGCTCACGCACGCTCCGCCCGAACAGATACGCTGGTACAACTGCCACGAGTGTTCGTACCGGGGCAAGCGAAAAGGCGACTTGAAAGCGCACGCACTGAAGCACGCGAGCGAAGGAGAAATACAGTGGTTCAGCTGCACGCAGTGCCTTTACCGAGGCAAGGACAAGAGGAATTTGATACAgcacatgctgacgcacgcTTCCGACgacgaaatcaactggttcaacTGCGCAGAGTGTTCGTACCGTTCGAAAATCAGGGCCAATTTGCGTCAGCACATGCTGGTGCACGCTTCGGCCGACGAAATCAAGTGGTTCGATTGTCCGCACTGCTCGTACCGGTCGAAGCAGAAGGGCGCCCTGAAGGTGCACATGGAAAGGCACGCCATAAAGGACGGCGTGTATGTCGGCATCAACTGGTTGAACTGCAGCAAGTGCTCGTACCGGTTCAAGGACAGGAGCAAGCTGGCCAGGCACATGCTCACGCACGGCACCCTGGAAGACGTCGTTTGGTTCAGCTGCACCGAGTGTTCGTACCGAGGCATAAGGAAGGAAAACCTGAAGCGgcacatgctgacgcacgcGGCGCCCGAAGAGATGGTGTGGCACTGCTGCACTCGGTGCTCGTACCGCGTCAAAGAGAAGCGCTACCTGCAGAGGCACTTGCTGAAGCACGCCACGCCCGAACCGGCCGTCGCTCCGATCGCCTGGTTCAACTGCACGCAGTGTTCGTTCCGGGCGGAGCAAAGCGACGCGCTGGAAGCGCACATGGAGACGCACGCGGTGAAACCGGACGGCGGTGCTGTCGAGGGCGTCGTCTGGTTGAACTGCAGCAAGTGCGCGTACCGGTTCAAAGACAAGCGCAGTCTGAAGAGgcacatgctgacgcacgccGCCCCCGAAGAGGTCAAATGGTTCAGCTGCACCGAGTGCGAGTACCGAGGGATACGGAAGGAGAACTTGAAGCGGCACATGATGACGCACGCCCCGGCCGAGGAAATGGTTTGGTTCTGTTGCGAACAGTGCTCGTACCGGGCGAAAGAAAAACGGTACTTGATCAAGCACATGGTGAAACATGCCCACGTCTGA
- Protein Sequence
- MDEATVCCAQCSHRAVWPFQLDRHIQKNHRVVDETEMYLAIMEPERPERYSCIRCDFKTFFKIALYEHCVKAHEAGIEDGNRRLSDEFVQYPCGSCEYEAHFSLSFIKHRTETVHDVVDSSTERRSFQCLDCPYKSRTKGCLKMHSLRHLPPEQSKCFSCTVCSYRARTKGDVTRHMLTHAPADLVNRFSCTECSYQAKRKEHLKNHMLTHAPPEQIRWYNCHECSYRGKRKGDLKAHALKHASEGEIQWFSCTQCLYRGKDKRNLIQHMLTHASDDEINWFNCAECSYRSKIRANLRQHMLVHASADEIKWFDCPHCSYRSKQKGALKVHMERHAIKDGVYVGINWLNCSKCSYRFKDRSKLARHMLTHGTLEDVVWFSCTECSYRGIRKENLKRHMLTHAAPEEMVWHCCTRCSYRVKEKRYLQRHLLKHATPEPAVAPIAWFNCTQCSFRAEQSDALEAHMETHAVKPDGGAVEGVVWLNCSKCAYRFKDKRSLKRHMLTHAAPEEVKWFSCTECEYRGIRKENLKRHMMTHAPAEEMVWFCCEQCSYRAKEKRYLIKHMVKHAHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -