Amac022152.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anaspis maculata
Gene Symbol
salm
Assembly
GCA_949128115.1
Location
OX421964.1:53768819-53785814[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 7.4 4.1e+02 3.0 0.1 3 19 2 18 1 20 0.92
2 10 1.4e-05 0.00078 21.0 0.9 1 23 328 350 328 350 0.98
3 10 1.9e-05 0.0011 20.6 1.9 1 23 356 378 356 378 0.98
4 10 0.18 9.7 8.1 3.8 2 23 688 709 687 709 0.98
5 10 1.2e-07 6.7e-06 27.5 0.6 1 23 715 737 715 737 0.97
6 10 0.00017 0.0093 17.6 2.6 1 23 747 769 747 769 0.98
7 10 0.026 1.4 10.7 2.4 2 23 1030 1051 1029 1051 0.97
8 10 0.13 7 8.5 1.0 1 14 1057 1070 1057 1071 0.93
9 10 3.9e-06 0.00021 22.7 4.0 3 23 1249 1269 1247 1269 0.96
10 10 5.6e-07 3.1e-05 25.4 0.9 1 23 1275 1297 1275 1297 0.98

Sequence Information

Coding Sequence
ATGTGCCAGCGATGTCAAGAGCAATTCACCGACATGCAGGAGTATTTAGCGCATAAAGTCGAATGCGAAACAAAAGCCATCAAACACGACGATCCTGCACATTCGGATCCCGAAGACATGGTCGTGTCTGAGGAAGACGACGACGAAGAAGAGTCTGGCGGAAAGAGAATGGAACGAATGCGACGTCACCGTCAAGATGCCGATAACAACAACTGCGTGGAGGAAAACTCGCCTGACGAAAACAGTCCCCAGTTGGATTTTCCATTCCCGGGGCCTTCAGCAGCTCCAGGACATGTCACGCTGGAGGTGCTGCAGAACACGAAAGTTGCCGTGGCACAGTTCGCAGCAACAGCTTTGGCCAACAACGTCAACAACGAAGTGGCCCTCCACGACCTCGCTGTCCTCCATACGCACCTGTACAACCTCCAGAATCAACAGGTTCTTCAACTGCAACTGATCAACCAACTCCGGCAGCAATTACAAATCGATCGGTCGAAAGCGCCGAGTCCGTCTTCTCCACAGCCTTCAGATAATGAAGGCGAAGGCATGAGCGTTCCGACTGAAGCATCACCCCCTCCACAGAACTTACCTACACCTCGCGAAATAACCCCGGACATTGTTATTGAGAATTTCCCGCTGAAACCGCCAACGATAGTGCAAGAAGAAATTAATCATCCAGCCCCTCCTATCATCGCTACCGAAGAAAGGAACGTACCATGCTCTCTACCTCTACAAATGCAACCGCAAAACTGTTCCATATCATCATCGTTAGCATCCACCATCATCACACACAGTAACGAACCGCCGACGGTTGAAGAACCGAACACTTTAGAAATGTTACAGAAACGAGCGCAAGAAGTGCTCGACAACGCCAGTCAAGGCTTGTTGGCCACTAATTTAGCTGACGAACTGGCGTTTAGGAAAAGTAAAGGTTCGATGTCGCCGTACGATTCGAAAGGCCGCAACGAACCGTTCTTTAAACACCGGTGCCGGTACTGCGGTAAAGTGTTCGGCTCCGACTCGGCCCTCCAAATACATATCCGCTCGCATACCGGCGAGCGCCCCTACAAGTGCAATGTTTGTGGTAGCCGTTTTACCACTAAAGGTAACCTGAAGGTACATTTTCAAAGACACAGTGCTAAGTTTCCGCATATCAAAATGAACCCGAACCCAGTGCCCGAACACTTAGACAAGTACCATCCGCCGCTGCTTGCTCAGCTGGGACCGAACAACCCGTCGCTATCGCCGGGCGGACCTCCGCACCCGCCTCATCTCGGCTTTCCCGGCGGACACCCTTTCCCTCCAACGTCACTTCCGCTTTTCAGGCCGCACGGCCCGCCACCACCCGAGCTCCTGAACAACCGGCTGCAGCCGTCGCCGCACAGGCCGCCGGAGCATCAGCAGCGGCTCTTCGCGCCGCATCCCATGTTCATGAAACGCGAAGAGCAGGATGCGCCGGCCGATCTCAGTAAACCTTTACGATCTCCCACGCCTCACGAAGCGCAAACCAAATCGGATATTCCTGAAGAAAAACACGAAGACTTTCGACCTCATCACCAGCAGCCATCAGTTCCTCAATTGACACCAAAACAAGAACCGAACGACGCGGAAAACGAACAGTCGGAATCGGAACGATACAATCCATCCCCGGTGCCCTACGACGAGTGCAGTATCGAAAGCAAATACAGCAACGAAGACATGCTCGGCCAGCGCAGCCCTCAAGAACACATCATGCAGGACGAGCCTGAAAATTTATCGAGCAAAAGCAGCGTGACGCTTCCCTTGAGCATCAGCACGGGCGCTCAAAGGCTTCCGGCAAATTTCAGCTTCGGTCAGGTGAGTTCGCCGCCGAGTAGCACGTCTTCTGGTAGCTTAGGCCCGTTCTCGAACACGCCACTGGTTGATCCGGCGAAGGATCCCGCGATATATTCGAATTTATTGCCTCGACCCGGCAGCAACGACAATTCATGGGAAAGTTTGATAGAAGTGACAAAAACCTCGGAAACTAGCAAGCTCCAGCAGCTGGTCGACAACATCGAACATAAACTATCAGATCCGAATCAGTGTGTGATATGCCATCGAGTGTTGTCGTGCAAAAGCGCCTTGCAAATGCATTATCGAACTCACACCGGAGAGCGCCCGTTTAAATGTAAGATTTGCGGTCGCGCATTCACCACCAAAGGCAACCTTAAAACACACATGGGAGTGCACAGAGCCAAGCCCCCGATGAGGGTTTTGCATCAGTGTCCAGTGTGCCACAAGAAATTCACTAACGCTCTAGTACTTCAGCAACATATCCGATTGCATACGGGCGAACCCACTGACTTGACGCCGGAACAGATCCAAGCCGCCGAAGTCAAGGATTTTCCGTCGCCCGGTGGATTTCCATCCTTGCCGAACTCGATGAATCCATTTCTAGGGCAGGCCTTTGCAGTTCCCGGATTATCACCGCTCGGTCACGCCGGCTTTATGAAGTTTGACAAGTTCGAAAAAGGCGGTGAATCGATGGAAGAGGACGACGATGACGACGACGATATTAGCAATTCAGATAATCAAAATATGCCTCGATTCTCTTCGCCTTCAGAAGAAGTTCAAAGTGTCCCGATGAGTACGATGGCTTCTCAACTGAGTGTTAGTGGTCTGAGCTGTTCCGCAGAAGATTTGTGTTCGTCGCGAACGGTAGCGTCCACATCTCCGATGTTGAACGGTGAAAAATCGCCGTGTCAGTCCATTACCAGTCCCGGAAGTTCGGATATTAGATCGTCACCTAATCATGTTCCAAACACGCCCGTCCAAATTCCACGTCCACCTTCATCTCAGCAAGCCGGCAGTCCGACCCCTTCCGAGTGCAATTCTTTGGGTGCTTTAGATTTAACGCCGAGAACTAACCAGCCGCTGATCACGAGTCCCGGTCCGAGTCCGGGTCCGCCGCCGTCTCTGTTTTCCACGTTCGGTTTGCTACCACCAGGTCAGACTTCATCGCCGTTGATGTCGTCGGCTTTGTCTTCACTGACTTCCTCCGTGCTGACCTCCACCGCTTTCAGTCCATTACGCTTAGCAGTTGGCCCACCAGCACGCGGCAACACCACCTGCAACTTGTGCTTCAAGACGTTCGCCTGCAATTCCGCCTTGGAAATTCACTACAGGAGCCACACCAAAGAGCGCCCATTCAAGTGCACCGTTTGCGATCGGGGCTTTTCCACAAAGGATGGATGTGCATGCAGACAGAGGCGTATCCAGGATGAAGTAGAGCCTTGGAGAGCTCGTAAAAGGAAACCTGCGCTGCGCAAGACAATACCATCGGTATTTCCTCTACCAATGAGCCCTGGATACGCCTCAAACTGGATGCATATCGCGGGAAACATGAAGCAACACATGCTGACACATAAAATCAGAGACATGCCTCAGCACATGTTCGAAAACAAACCGCCGATGAGCGGAGACGAATCTTCGCAGTCGCAACCGCACCAACCGCAGctgcagcagcaacaacaacaacagccaCCACCGCCACCTCCTCAGCCTCAGATTTTACCGCCTCAGAGAGAGCAGCAGCCGACGGCGACGTCTATGAACGAAAGTGATCATCAGCAACAACCTCCGCCGCTCCCGCCGTCACTCACATCTCCTCCAGAACAGAACAAAGAACCTCAACAGCAGCCGCCTATCAACAAGAGGGAACCTACAGAGACTGAATTGCCCTTGCCGAAACGTCCACCCAGCTTACAGGCCAGTAAGCACTTGTGCCACGTATGCAATAAGAACTTCTCGTCCAGTTCGGCCTTGCAGATACATATGCGAACGCACACGGGTGATAAGCCGTTCAGATGCACCGTATGCCAGAAGGCGTTCACCACAAAGGGAAACCTCAAGGTACACATGGGCACCCATATGTGGAGCAACGGGGCGTCGCGACGCGGACGTCGCATGTCGCTAGATCTGCCGCCCATGCCCATGACACCCAAGGATTCCGAATTTCTGCAACGGAGGCCCGACCTTTTCTACCCGTACCTACCGGCTCCATTCCTTAACGGCATGCAGCAAAAGCTGAACGAAATGTCAGTGGTGCAAAACAACCAAAACGGGATGTCGGGCGCCGGCAAATACAGCGGCCTGCTGGGCTTCGGCTATCCGCCGCCAGAGGCGCTGCGATCTCAGGGTGGCTCTCCGGAACGGCCCGAGAGGCCGCCCAGCCGCGAAATCCCGGAGTCCCGGAGCTTATGGGACATCCACTTTGAGCGAAAATCGGCACCGGAAGCTCCCCGGGAGGACCTCTTGCCGGCCAATCGAGAAGGGCTGGCCGCCTGA
Protein Sequence
MCQRCQEQFTDMQEYLAHKVECETKAIKHDDPAHSDPEDMVVSEEDDDEEESGGKRMERMRRHRQDADNNNCVEENSPDENSPQLDFPFPGPSAAPGHVTLEVLQNTKVAVAQFAATALANNVNNEVALHDLAVLHTHLYNLQNQQVLQLQLINQLRQQLQIDRSKAPSPSSPQPSDNEGEGMSVPTEASPPPQNLPTPREITPDIVIENFPLKPPTIVQEEINHPAPPIIATEERNVPCSLPLQMQPQNCSISSSLASTIITHSNEPPTVEEPNTLEMLQKRAQEVLDNASQGLLATNLADELAFRKSKGSMSPYDSKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPYKCNVCGSRFTTKGNLKVHFQRHSAKFPHIKMNPNPVPEHLDKYHPPLLAQLGPNNPSLSPGGPPHPPHLGFPGGHPFPPTSLPLFRPHGPPPPELLNNRLQPSPHRPPEHQQRLFAPHPMFMKREEQDAPADLSKPLRSPTPHEAQTKSDIPEEKHEDFRPHHQQPSVPQLTPKQEPNDAENEQSESERYNPSPVPYDECSIESKYSNEDMLGQRSPQEHIMQDEPENLSSKSSVTLPLSISTGAQRLPANFSFGQVSSPPSSTSSGSLGPFSNTPLVDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKDFPSPGGFPSLPNSMNPFLGQAFAVPGLSPLGHAGFMKFDKFEKGGESMEEDDDDDDDISNSDNQNMPRFSSPSEEVQSVPMSTMASQLSVSGLSCSAEDLCSSRTVASTSPMLNGEKSPCQSITSPGSSDIRSSPNHVPNTPVQIPRPPSSQQAGSPTPSECNSLGALDLTPRTNQPLITSPGPSPGPPPSLFSTFGLLPPGQTSSPLMSSALSSLTSSVLTSTAFSPLRLAVGPPARGNTTCNLCFKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKDGCACRQRRIQDEVEPWRARKRKPALRKTIPSVFPLPMSPGYASNWMHIAGNMKQHMLTHKIRDMPQHMFENKPPMSGDESSQSQPHQPQLQQQQQQQPPPPPPQPQILPPQREQQPTATSMNESDHQQQPPPLPPSLTSPPEQNKEPQQQPPINKREPTETELPLPKRPPSLQASKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPMPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEMSVVQNNQNGMSGAGKYSGLLGFGYPPPEALRSQGGSPERPERPPSREIPESRSLWDIHFERKSAPEAPREDLLPANREGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01330030;
90% Identity
-
80% Identity
-