Amac035125.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- Znf219
- Assembly
- GCA_949128115.1
- Location
- OX421967.1:21816260-21842702[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.065 3.6 9.5 0.1 2 23 175 197 174 197 0.94 2 13 0.006 0.33 12.7 9.6 1 23 228 250 228 250 0.98 3 13 0.00022 0.012 17.2 4.4 1 23 256 278 256 278 0.97 4 13 3.1e-06 0.00017 23.1 2.4 1 23 284 307 284 307 0.97 5 13 0.062 3.4 9.5 0.5 2 20 311 329 310 331 0.92 6 13 0.0012 0.063 15.0 3.4 3 23 394 414 392 414 0.97 7 13 0.00018 0.0098 17.5 4.5 1 23 420 442 420 442 0.99 8 13 4e-06 0.00022 22.7 0.2 1 23 448 470 448 470 0.97 9 13 2.1e-05 0.0011 20.5 3.2 2 23 476 497 476 497 0.98 10 13 0.00037 0.021 16.5 1.3 1 23 503 525 503 525 0.95 11 13 2.4e-05 0.0013 20.3 3.3 1 23 531 553 531 553 0.98 12 13 0.0024 0.13 14.0 7.2 1 23 559 581 559 581 0.98 13 13 0.054 3 9.7 0.3 3 22 594 613 592 615 0.87
Sequence Information
- Coding Sequence
- ATGGACGAATGCAACCAGCAAGATTTTGTGGCGGTTCGCCTGAACGAAATCTGCAGGAGCTGTTTGCTCAAAACCGGAGAAAACATGTCGAATTTGTGCGAAAAAACCGACAATGCAGCTGTCCTGGTCACCATGTTATCTTCCATCGGAAATTTTGAGGTTGAAGTTAATGAACTGCTACCTTCGTACCTTTGCGCCCCCTGCGAAGACAAGCTGAGATCCTGCTACGAGTTCCAACAGCAGCTGCACAGGTCTGAAGAAATCATACGGCAGTGCCTCATTGATGATGACAAGtcacaGGTTGATGTTAAAACTAACCAGTTGGATGACCTTATTGACATCGAGGAAACGATGGTCGTCTTTGATCAGGAAGAAAAAGCTGAAAAACAGACCGAGAACGCCGAAGTCGAGATCAAGATAAAGAACGAAAAGCAGCGATTGTCGCAGTTCTCCCACGTTGAAGTCGAGGAAGCCATCGGCGAAGCCGAGTGCAAATATGAAGAGCAGTTTTACCAGAATGTTACGTGCGTGGTGTGTGGGTTCCAGAGCTCAAACGCCAGGGCGCTGTCCGCGCACATGACTCAGTTGCATAAGGACGTGAAAGAAAAGTGGTGCTCTATTTGCAATGCTATAGTGGAGGATCTGCAAGAGCACATGACTGAAGAGCACAATGGTACCCAGCACAAGTGCAAGTTTTGCGGGAAATGTTTGAAATCTCGCTCTCATTTTTTTGAACACCTCCGTGGCCATGGCAACATCCGACCGTATCATTGCACCATTTGCGATAAGTCATTCATTTCGTCCAGACATCTGACAGGCCACAACCGACTCCACACTGCCAAAGAATTCTACCAGTGTCCTCATTGCAATAAAACCTTCAACCAACAAGCTTACATGCGAagccatattttaaaaattcacaAGAGTTTGTCATGTTCCAAATGTTCAACCACTTTTGAATCTGCCGAAACGTACAACGCTCATGCCTGCGTCAGCTATGAAGAAATTCAGAAAACATCTCCTGTTGCTTCTTCCGAACAACCAACCGCAATACTatcgaCGGATCCTCAGAATTTCTGCAACGAATGCAACAAGAGAGTGAGAAGTCTCAAATACCACATCGAGCGGCATCATTCCAAAAACAAGACTGACGCTGACAGTAATGCCACTACGTGTCTTTGTGCCGTGTGTGGTAAACAGTGCAGAACTGTTGGCAAGCTGAGAATCCACATGCGCACACACACAGGCGAACATCCATACAAATGTTCGCATTGTGATCGCAGAGTGTCGTCCAGGCATCAGTTGGTGGTGCATGAACGCACACATACCGGTGAAAAACCTCACGTCTGTGGAATATGCGGACGGGCGTTCGCTCAATCCAGCGTTTTAAACACTCACATGAAAATCCACACTGGCAGGCCAGAACAGTGCGACATTTGCAAAAAACGCTTTTGCAGGCCGGCCCAGCTGAAACTCCATTTACGACAACACACAGGAGAAAAACCGTTCTTGTGCTCCGTCTGCAGTCAAGGCTTCAGACAAAGGAGCCATCTAGTGGACCACGAAAGAATCCACAGCGACGAGAGGCCTTTCACTTGCAACTACTGCTACAAGGGTTTCAAACAAAAAACGACACTCAAGTCGCACTTGCAGATACATTTGGACAAACGGCCATTCAAGTGCAGTCAATGTTCGTACGCGTGCCGACAGAGTCACAGTTTGACTCAGCACATGAAACAGCATGAAGCCGACGCCCCTAGAGCCGACAAACCCCATCTTTGCGTCATCTGCCAGAGAGGTTTCAGCACCATGGCTATGCTGACGTCGCACGTCGGCCAAATGCACCAATCGATGAGCGTGGAAATCGAAACCATACATTTTACTGCTCTGTGGACTGGGGAGCAAAATGGGGTGTTGAAAAGGACTCGCAAAAACAAAAACGGGACCGAGGAGCAAAATGGAATGTTGGGCAAGAAGCTGAAAAACTGA
- Protein Sequence
- MDECNQQDFVAVRLNEICRSCLLKTGENMSNLCEKTDNAAVLVTMLSSIGNFEVEVNELLPSYLCAPCEDKLRSCYEFQQQLHRSEEIIRQCLIDDDKSQVDVKTNQLDDLIDIEETMVVFDQEEKAEKQTENAEVEIKIKNEKQRLSQFSHVEVEEAIGEAECKYEEQFYQNVTCVVCGFQSSNARALSAHMTQLHKDVKEKWCSICNAIVEDLQEHMTEEHNGTQHKCKFCGKCLKSRSHFFEHLRGHGNIRPYHCTICDKSFISSRHLTGHNRLHTAKEFYQCPHCNKTFNQQAYMRSHILKIHKSLSCSKCSTTFESAETYNAHACVSYEEIQKTSPVASSEQPTAILSTDPQNFCNECNKRVRSLKYHIERHHSKNKTDADSNATTCLCAVCGKQCRTVGKLRIHMRTHTGEHPYKCSHCDRRVSSRHQLVVHERTHTGEKPHVCGICGRAFAQSSVLNTHMKIHTGRPEQCDICKKRFCRPAQLKLHLRQHTGEKPFLCSVCSQGFRQRSHLVDHERIHSDERPFTCNYCYKGFKQKTTLKSHLQIHLDKRPFKCSQCSYACRQSHSLTQHMKQHEADAPRADKPHLCVICQRGFSTMAMLTSHVGQMHQSMSVEIETIHFTALWTGEQNGVLKRTRKNKNGTEEQNGMLGKKLKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -