Amac014573.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421963.1:16386972-16409333[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.033 1.8 10.4 0.2 1 23 141 163 141 163 0.97 2 10 3.9e-05 0.0022 19.6 0.8 3 23 170 190 169 190 0.97 3 10 2.1e-05 0.0011 20.5 0.0 2 23 197 218 196 218 0.97 4 10 5.8e-06 0.00032 22.2 0.2 1 23 224 246 224 246 0.99 5 10 6.2e-06 0.00034 22.1 0.5 1 23 252 274 252 274 0.98 6 10 8.2e-06 0.00045 21.7 0.9 1 23 280 302 280 302 0.97 7 10 1.5e-05 0.00083 20.9 0.1 1 23 982 1004 982 1004 0.98 8 10 5.5e-05 0.0031 19.1 1.2 1 23 1010 1032 1010 1032 0.98 9 10 0.00048 0.027 16.2 0.2 3 23 1040 1060 1039 1060 0.97 10 10 0.00011 0.0059 18.2 3.1 2 23 1067 1088 1066 1088 0.97
Sequence Information
- Coding Sequence
- ATGGACACGACAAATCCACCAACCTACTGCCGAACTTGTCTTTTGCCTTCTCCTCCAGCCCCAAAACACATATTCACCGATTCTTTGGACAAGACCCTAAAAGAAATCTTCGCTTTACAAGTTGATGTAGGCGATGGGCTTTCCGAAATCATCTGCGAATTTTGCGTGGAACAAGTGAACAATGCACACAGTTTCAAAAAACTGTGTCAACAAAGTGATGGAAGGTTGAGAAATCCGGCAGCAATCCAGAACCCTGAAAGCACAGGCGTGCAGATCatttatttgaaagtcacgGACAACGGTGGAACCGAAATCGATGAGGAACATTCAGTGGAACAAGCTGTGAAGGAAGAATCCGAAGAGCAAATCAAAATGGAAGTTGCTGAAGAGAAAATCAAAATGGATCTCGACGAAAACAGTTACGAGTGTTCAATTTGCGCGAAGCAATTCCAGGACGTTGCTGCGTACAAGAAACATGAGAAAGGCCACAGGTTGAAGAATCGTCCATGTCCGACTTGTGGCAAGCACTTTTATAACGAGAGAGATCTGCAAATTCACCTCAGACTGCACACCGGTGAAAAGCCGTTGATGTGTGAGGATTGCGGGAAGCAGTTTGGCGACCCAAGGGGTTTGGCAGTGCACATGAAAACGCATTCCAAAGCCAAGCCGTACGAATGCGAGATTTGTAAGAAGACTTTTGGGTACTCCGGAGTGTTGGAGGCGCACATGAGGACGCATACGGAGGAGAGGCCGTACGTTTGTGCAATTTGCGGGAAAAGTTTTGTGTACAGGCATAACTTGGTCATTCACACCCGGGCACATACAGGGGAAAGACCATACCAGTGTAACCTGTGTGACAAATCGTTTAGTTCCAGTTCAACTCTGAAGGGGCACAGTCTCGTTCACACCGGAGAGAAACGCTCCAGCTTTTCCGATGAAGAAAATCCCCAAGTGTGTTTGCGAAGGACGGAACTCTACACAAACAGAAAAGACCGATTCGACGGTTACGGTGATGCTGACTTCTTCGAGAGATTTCGCTTGACAAAACCCACCGCGTTGTTTCTCTTCAGTTTAATTGAAAATACGATTCGATCGCCAACGGACAGCGATGAGAGTATACCCCCCATGCTGCAGCTCCTTGTTACGCTACGATTTTATGCAACAGGCAATTTTCTAATCGTCGTTGGAGATTTCACGGACGTATCTACATCTTCAGCAAGTGGGATCGTTGAAAGAGTTTCAATAGCTATCGCTTCTTTAAGGCCACGATTCGTAAAAATGGATAAAGATGAACAAGAAATGGCGAGAAGTGCTGCAGCGTTTTACGACTTGGCGAGTTTTCCCAGAGTTATAGGAGCCATAGACAGTACTCTCGTAAGAATTGAAAAGCCAGATGGCGAATATGCCAAACGAGACTATGCGTTCATGTGTAGGAAAGGCTACTTTGCATTGAATGTACAGACCATTTCAGGTGCAGATCTGAAAATAAAGAATATTATCGCTCGGTGGCCAGGGTCTGTGACCAAGCAATGGATCTTTACTGATTCTCCAGTAAAGGTCGAGTTTCAAACCGGAAAATACGGACAATACATGTTAATAGGAGACGGTGCATATACGGTTCAACCTTACTTGATGACCAAACTAGGAAAGACGACCACGCCTGCCGAAAAGTTATACAATGAGAGCCTTATACGTACTAGAAAGGTTATTGAAAGAGAGCATTGTGTTTGGAAACGTCGGTTTCCAATCTTATCAACTGGATCAAAACTAAAATTGAACACAGTCCCGGCAGTGATTGTAGCAACTGCAGTTATCCATAATATTGCTGTGGAAATGAATGACAACTTTCCTGATGAATGGTCCGATGACAAGATGATAGAAGACAAAGAAGAACCCAAAGAAAATCATGTACAACTGCCGGCAAATCACCTACCACTGCCGGAAAATCGCTCTGGGAAAGAAATTCGGCAGCTGATAATAAATGAACATTTTGCACGattattCTCCAGTTCTTCTGATGAAGAAAATCCCCAAATGTGTTTGCGAAGGACGGAGCTCTACACAAACAGAAAAGACCGAATCGAAAGTTACGGTGATGCTGACTTCTTCGAGAGATTTCGCTTGACAAAACCCACCGCGTTGTTTCTCTTTCATTTGATTGAAAATACGATTCGATCGCCAACAGACAGCGATGAGAATATACCTCCTATGATGCAGTTCCTTCTTACACTACGATTTTATGCAACAGGCAACTTTCTAATCGTCGTTGGAGATTTCACGAACGTATCTACATCTTCAGCAAGTGGAATTGTTGAAAGAGTTTCAATAGCTATTGCTTCTTTAGCGCCACGATTCATTAAAATGGATGAAGATGAACAAGAAATGGCGAGAAGTGCCGCAGCATTCTACGACTTGGCGAGTTTTCCCAGAGTTATAGGAGCCATAGACTGTACTTTCGTAAGAATAGAAAGGCCAGATGGCGAACATGCCAAAGAAGACTTTGCGTTCAGATGTAGGAAAGGCTACTTTGCATTGAATATACAGACCATTTCAGGTGCAGATATGAAAATGAAGAATATTATTGTCCGGTGGCCAGGGTCTGTGAGCAAGCAATGGATCTTTAATGATTCTGAGGTAAAGTTCGCGTTTCAGGACGGAATGTTCGGGCAATACATGTTAATAGGAGACGGTGCATATAAGGTTCAACCTTACTTGATGACCAAACTGGGAAAGGCAACCACGCCTGCCGAAAAGTTATACAATGAGAGCCTCATACGCACTAAAAAGGTTATTGAAAGGGAGCACTGTGTTTGGAAACGTCGGTTTCCAATCTTATCACTTGGATcaaaactaaaattgaaaccAGTCATGACGGTAATTGTAGCAACTGCAGTTATCCATAATATTGCTGTGGAAATGAACGATAACTTTCCTGATGAATGGTATATCTGCAATATCTGCGGAAAACTAACGGCCAGATCTGGCGATTTGAACATCCACATGCGGTCCCACAGTGGGGAAAGGCCTTACGCCTGTGCCATTTGCCCGAAACGGTACAAGATGTCTTCGCATCTCACCGATCACGTCAAAACTCACACGGGCGATAGACGCCACGGGTGTGACGTGTGCGGCAAGGCGTTCTACAGCAACCGCATGCTGCAGGCCCACAAGACCATCCACACCAAGGAGCGACCGCTGCAGTGCAAGTTCTGCGGCAAGACGTTTTCGCAGCGCAGCTCGCGGTATCTCCACATGAAGTCCCACGTAAACTTTAAGTCGTCTGTCGACGAAAAGCAGctatttattaaataa
- Protein Sequence
- MDTTNPPTYCRTCLLPSPPAPKHIFTDSLDKTLKEIFALQVDVGDGLSEIICEFCVEQVNNAHSFKKLCQQSDGRLRNPAAIQNPESTGVQIIYLKVTDNGGTEIDEEHSVEQAVKEESEEQIKMEVAEEKIKMDLDENSYECSICAKQFQDVAAYKKHEKGHRLKNRPCPTCGKHFYNERDLQIHLRLHTGEKPLMCEDCGKQFGDPRGLAVHMKTHSKAKPYECEICKKTFGYSGVLEAHMRTHTEERPYVCAICGKSFVYRHNLVIHTRAHTGERPYQCNLCDKSFSSSSTLKGHSLVHTGEKRSSFSDEENPQVCLRRTELYTNRKDRFDGYGDADFFERFRLTKPTALFLFSLIENTIRSPTDSDESIPPMLQLLVTLRFYATGNFLIVVGDFTDVSTSSASGIVERVSIAIASLRPRFVKMDKDEQEMARSAAAFYDLASFPRVIGAIDSTLVRIEKPDGEYAKRDYAFMCRKGYFALNVQTISGADLKIKNIIARWPGSVTKQWIFTDSPVKVEFQTGKYGQYMLIGDGAYTVQPYLMTKLGKTTTPAEKLYNESLIRTRKVIEREHCVWKRRFPILSTGSKLKLNTVPAVIVATAVIHNIAVEMNDNFPDEWSDDKMIEDKEEPKENHVQLPANHLPLPENRSGKEIRQLIINEHFARLFSSSSDEENPQMCLRRTELYTNRKDRIESYGDADFFERFRLTKPTALFLFHLIENTIRSPTDSDENIPPMMQFLLTLRFYATGNFLIVVGDFTNVSTSSASGIVERVSIAIASLAPRFIKMDEDEQEMARSAAAFYDLASFPRVIGAIDCTFVRIERPDGEHAKEDFAFRCRKGYFALNIQTISGADMKMKNIIVRWPGSVSKQWIFNDSEVKFAFQDGMFGQYMLIGDGAYKVQPYLMTKLGKATTPAEKLYNESLIRTKKVIEREHCVWKRRFPILSLGSKLKLKPVMTVIVATAVIHNIAVEMNDNFPDEWYICNICGKLTARSGDLNIHMRSHSGERPYACAICPKRYKMSSHLTDHVKTHTGDRRHGCDVCGKAFYSNRMLQAHKTIHTKERPLQCKFCGKTFSQRSSRYLHMKSHVNFKSSVDEKQLFIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -