Amac020585.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421964.1:23634917-23649435[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00012 0.0066 18.1 0.9 2 23 141 162 140 162 0.97 2 14 0.00019 0.01 17.4 4.2 1 23 167 189 167 189 0.97 3 14 0.00073 0.04 15.6 5.2 1 23 195 217 195 217 0.97 4 14 0.0099 0.55 12.0 1.7 1 21 223 243 223 244 0.93 5 14 0.00026 0.014 17.0 0.7 1 23 251 273 251 273 0.98 6 14 0.0082 0.45 12.3 0.1 1 23 506 529 506 529 0.97 7 14 1.8e-05 0.001 20.6 3.1 3 23 539 559 538 559 0.98 8 14 0.00016 0.0085 17.7 5.2 3 23 567 587 565 587 0.98 9 14 0.0002 0.011 17.4 0.4 1 23 593 616 593 616 0.95 10 14 0.0013 0.072 14.8 1.0 1 23 631 653 631 653 0.96 11 14 0.00021 0.011 17.3 4.1 1 23 659 681 659 681 0.98 12 14 4.6e-06 0.00025 22.5 0.5 1 23 688 710 688 710 0.96 13 14 2.9e-05 0.0016 20.0 1.3 1 23 716 738 716 738 0.98 14 14 2.9 1.6e+02 4.3 0.1 3 12 746 755 744 757 0.84
Sequence Information
- Coding Sequence
- ATGGAGCATACGCCCCAGATCGACCTGCAGCAGGTGTGCCGCACGTGCAGGGGCCAGTCCTGCGAGATGCTTTCGGTGTTTGACACGTGCGAAATCTCCAACGAGAATCCCCGTATTGACGAGATGCTAATGGCTTGCGTCGCACTCCAGGTGAAACCCGAGGATGGCTTGCCGACTGTGATTTGTCTCAAGTGCACCATGCAACTGAAGGACGCCTACTTGTTCAAGCAGCAAGCGCACCAGGCGGATTCCAGTCTTCGGCAGTTCGCCAAATCTGCAAACCCAGCCAGGGTAAAAGAAGAAAGGCACAATGATGTCCTGCCCGaatcCGTAGTCGAATCTGTCACTGAAGAACCAGAAGAGGTGCCGCATCCAAAGTCGGACTTCATCGAGTTCCTCGACAACAACCAGATGTTGCTGACGTGCCGGGATTGCCAGAAGATCTTCACGACGCTCGAAGGTCTGCGCAGCCACAAACGCATCCATTCGGGCTCGCTCTTCAAGTGCAAGTACTGCGGCAAAGGCTACACCCGACAGACTCACGTGTACCGTCACGAACTGAGCCACGGCAAGCACAAGCTGCACGTCTGTCGCATCTGCAACAAGACCTTGACCCGCATGGAACACCTGAAACGCCACCTGACCAcccatttgaaagaaaaaccCTACAGCTGCGACGCCTGTCATCGCGGCTTTAACCGCACCGATCACCTGGAGAACCACAAGCTGCGCTGCAAAGGCGACCGGCTCTACATCTGCGACATCTGCAACAGGGGCTTCGCCCGCCACGACTCGCTGGACGTGCACAAGCGCCTGCACGAAAACCAAAAGCCCGTGCTGCCGACCCTGGACAACATCGACAACATCGAGGAGCACTACTACGAAATCGATCACGATCCGAACGTGGACTTTTCGCCCCCGTCGCCGGCTTCGGACATCGACGACGATTACCTGGAGCCGCAGGTTGAGGTGACGGAGAATTTTGACGAGGACCGCGTGGCCGATCTGAAACACGAAGCCTTGGACATCGTCGATGACAAGGTCGCTGTGATCCAGTCGATCGCAGCGGCCGCCGCGGAGAAGAACAGAGCCGCGGTAGAGGTGTTGGATGATCCGGGGGAGAGTTCGGATGACGGCGGAGGCGATGACCACAACGACGTGGAGATGGATGCGGGAGCTATGAACGATAGCGGACCCGAAGAAACGACCGAAGATCAGCTGATGAAAGTCATTGCCAGTGAAGTGCTGGAAGAAAACGATTCAGACAGCGTTCATTCAGAGTATCTGCCGACCAAGCCTGCCAAAGGCAAGAAGCGACGCGGCCGTCCGCGCAAGACGCCCGTCAAAGGCTCTTCCGGCGGTACCGGCATCTCGCGGCCGCGAGGCCGGCCTTCGGCGGCCAAACGCGCTGAATACGCCGCAGCCATGGCCGCCGCCGGCGAAGAAGGCATCGAGGGCCTCCGTAGCGAAGAAGAACCGCCCGTCGAAGAAGGCGACGGCGCCGAAGGCAACCAGTTCCCTTGTCCCAGCTGCGACGACGTCTTCCCCCGCATGATCCTCCTCGAACGCCACGTGCGCAAAAAGCACGACGCGTCCAAGGCCGTGCCGCACGGCTGCAAAGTCTGCGGCAAGATCTTCAGCCGCTTCAACCACCTCAAGCGGCACATGTACTCGCACGCCGTCGTGAAACCCTTCGGCTGCGACCAGTGCGCCAAGAAATTCTCGCGACGCGACCACCTCCAGCACCACCTGCGCATGCACGAGAAGCGCGAAAGTCACATCTGCGACGTCTGCCAGCGTCCGTTCGCCCGCGCCGACCAGCTGGCCAAGCACAAGGCCACGAAGCACGGCGAAGGAGCCGCCACCGGCACGTCGACGAGCGAAAAGCGCTTCGAATGCGACGTGTGCAACAAGAGCTTCACGACGGAGAAGTACCGGGACGTGCACCAGAAGGCGCACATGGGCGAGAAGCTGTACAAGTGCAAGACGTGCGACAAGGCGTTCCTGAGCAAATCGCACCTGACCGAACACATCAAGTTCCACAACGAGCACTCGAAGAAGTTCTTGTGTTCGGAATGCGGCCAGCGGTTCATCCGGAACGATTACCTGGTGATACACATGCGGAGGCACAGGGGCGAGAAGCCGTTCAAGTGCAAGTTTTGCGGCAAAGGTTTTCCGAGGACTACCGATTTGACGGTGCACGAGCGCTACCACACCGGGGAGAAGACGCATCTCTGTACGATTTGCGGCAGAGGATTCGGCAGGGCGCCGCGCCGACGGGCTCAGATCACGGGATCACTTGCGAAGAAATTACACTCCGGCGCTAGGGTCCTCCTTGGTGAATTTtaa
- Protein Sequence
- MEHTPQIDLQQVCRTCRGQSCEMLSVFDTCEISNENPRIDEMLMACVALQVKPEDGLPTVICLKCTMQLKDAYLFKQQAHQADSSLRQFAKSANPARVKEERHNDVLPESVVESVTEEPEEVPHPKSDFIEFLDNNQMLLTCRDCQKIFTTLEGLRSHKRIHSGSLFKCKYCGKGYTRQTHVYRHELSHGKHKLHVCRICNKTLTRMEHLKRHLTTHLKEKPYSCDACHRGFNRTDHLENHKLRCKGDRLYICDICNRGFARHDSLDVHKRLHENQKPVLPTLDNIDNIEEHYYEIDHDPNVDFSPPSPASDIDDDYLEPQVEVTENFDEDRVADLKHEALDIVDDKVAVIQSIAAAAAEKNRAAVEVLDDPGESSDDGGGDDHNDVEMDAGAMNDSGPEETTEDQLMKVIASEVLEENDSDSVHSEYLPTKPAKGKKRRGRPRKTPVKGSSGGTGISRPRGRPSAAKRAEYAAAMAAAGEEGIEGLRSEEEPPVEEGDGAEGNQFPCPSCDDVFPRMILLERHVRKKHDASKAVPHGCKVCGKIFSRFNHLKRHMYSHAVVKPFGCDQCAKKFSRRDHLQHHLRMHEKRESHICDVCQRPFARADQLAKHKATKHGEGAATGTSTSEKRFECDVCNKSFTTEKYRDVHQKAHMGEKLYKCKTCDKAFLSKSHLTEHIKFHNEHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKFCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAPRRRAQITGSLAKKLHSGARVLLGEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -