Basic Information

Insect: Anaspis maculata
Gene Symbol: SCRT1
Assembly: GCA_949128115.1
Location: OX421963.1:51813709-51848671[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00098 0.054 15.2 0.2 1 23 294 316 294 316 0.95

2 12 4.2e-05 0.0023 19.5 1.5 1 23 324 346 324 346 0.99

3 12 6.8e-06 0.00037 22.0 0.2 2 23 354 375 353 375 0.97

4 12 1.4e-05 0.00076 21.0 1.2 1 23 381 403 381 403 0.98

5 12 0.0047 0.26 13.0 1.8 3 23 412 432 410 432 0.98

6 12 0.00082 0.045 15.4 2.2 1 23 438 460 438 460 0.96

7 12 1.7e-05 0.00095 20.7 0.1 1 23 466 488 466 488 0.98

8 12 1.3e-06 7.4e-05 24.2 0.9 1 23 494 517 494 517 0.96

9 12 7.2e-05 0.004 18.8 0.4 1 23 523 546 523 546 0.95

10 12 7.9e-06 0.00043 21.8 2.6 1 23 552 574 552 574 0.99

11 12 0.00033 0.018 16.7 0.4 1 23 580 602 580 602 0.94

12 12 0.0057 0.31 12.8 0.2 1 23 608 632 608 632 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00098	0.054	15.2	0.2	1	23	294	316	294	316	0.95
2	12	4.2e-05	0.0023	19.5	1.5	1	23	324	346	324	346	0.99
3	12	6.8e-06	0.00037	22.0	0.2	2	23	354	375	353	375	0.97
4	12	1.4e-05	0.00076	21.0	1.2	1	23	381	403	381	403	0.98
5	12	0.0047	0.26	13.0	1.8	3	23	412	432	410	432	0.98
6	12	0.00082	0.045	15.4	2.2	1	23	438	460	438	460	0.96
7	12	1.7e-05	0.00095	20.7	0.1	1	23	466	488	466	488	0.98
8	12	1.3e-06	7.4e-05	24.2	0.9	1	23	494	517	494	517	0.96
9	12	7.2e-05	0.004	18.8	0.4	1	23	523	546	523	546	0.95
10	12	7.9e-06	0.00043	21.8	2.6	1	23	552	574	552	574	0.99
11	12	0.00033	0.018	16.7	0.4	1	23	580	602	580	602	0.94
12	12	0.0057	0.31	12.8	0.2	1	23	608	632	608	632	0.92

Sequence Information

Coding Sequence: ATGTCGACGCCAACGAGCCTCTGCTTGATATGCAACTCGAGCTGTGCATCCAGCAGAAATTCTATTCAAATCTTCAACAAAGATGCCAAGACCTTCTCCGACTCCCAGTTGAGCGTTACTGTTGGCAAAGTCCTCgataaagaaatcaaagaagaaTCCGCTCCAACTCAAGTCGTCTGCAAGAAATGCTACAAATTAGTAGACGAAGCGGACGAATTGGAACAAAGGCTGCATGAATTGAAAGCAGATCTCATGAACAACTTTTTGAAGTCATCAAAACAAAGAAACACCGATGGACCATCAGAGAATACAAGTGAGGAATCAAAAGAACATGATTTGCCAAGGAAAATATTGGACATACCTTCTTCTGACGATGACTCCTCACAGGTGAACACCGATAGTAAAATTCCAATGCAAGTAAGTATCCAGGATATTGAGATGGAGCTCGTGAAAATTCACGGGGGCAGTGAAGATGCCACTTCGCCAAAAGAAGGCAGCCAAGAAGTTTCTGGACAAACATTCTTCACCACTGATGTCATAGATTCTGGAGCAATAGAGCACTCCTCTGATTCGGATTATGAGCCGCCCAACAAAAGGGAAGGTTTCATGAGGAATATTGGAGAAGTCAGAGTGAAAATTGAAGCACCAAACGATGCCGGCAGCAGCAGCGACAAACCAAACATCCTGAAAAAGAGGACCGTCATCCAACAGGCGACCGAATCTATCACAATCAAACAGGAGCCGATAAATCCCGCTCAACAGTTCATCGCGCGTCAAGATTCCGTCTTTTCCTGTCTGCTTTGCCAGGGCGACGAGACCGTGGCCGGCGACGTCCGCGCCATCACGGCCCACATGAGATCGGTGCACGAATTGCGCCTCTACATTTGCGACGTGTGCGGTCAGGACTTTCGCAAGCGAAACGAGCTCTCCAGTCACTTGGATGAGCACGTGGCCGCCGAAGAAGGCGACTTCCAGTGCGAGGTCTGCAACCGCATCTTTAGCAACCTTCGGCTGTTCCGCATCCACCGGCGGATGCACTATCCGCAGAACAAGGCGTGGCCTTGTGACGTTTGCGGCAAAAAGTACTCCAGCCGCAACCTCCTCGAGGAGCATATGAACACTCACTCCGGCATCCGTCCGTACGTTTGCCAGCAATGCGGCAAGGATTTCGCCTCCAAGTACACCTTCCGCGCCCACGAGAAGACCCACGAGGTGCGGCCCCGTCCGTACGGCTGCGGTCACTGTTCCAAGTCCTTCCTCAGTCAGCAGAATCTGGTGCAACACGAGCGCACGCATTCTGGCATCAAAGAGTTCAGCTGTCACTTGTGCTCCAAACGTTTCGGCTCCGCTCACAATTTGGAGGTCCATTCCATCGTCCACACCGGATATAAGCCCTTCGTTTGCGAGATTTGCAACAAAGCTTTCGCGAGAAAAGCAGAGATACGCGATCATGCTCGTACTCATACTGGAGAGAGACCCTATCAATGCGAGACTTGCGGAGCTACATTTTCTCAGAGGTCGAACTTGCAATCACACAAGCGTGCAACGCATCTCGATGATAAAAGATACATTTGCATGGACTGCGGTAAGGGTTTCAAGCGTCGCCGTCTGCTGGACTACCACATGAAGGCTGCACATACTGGAGAACGTCCGTTCAAATGCAACATTTGCGATGCCACTTTTGTGTACCCAGAGCACTTCAAGAAGCACAGGCGTATACACACAGGCGAAAAACCTTTCCTTTGCGAGGTGTGCGGTAAGGCCTTCAACAGCCGCGATAACCGCAACGCTCATCGTTTCGTTCATTCCGACAAAAAGCCGTACGAATGCCTGGTGTGCGGCGCCGGTTTCATGCGAAAGCCCCTGCTCTATCAGCACATGACCACACAGAACCACCTGAACGACACGATCGTCGTCAACCAGCCGCGTCTCACCACCGACGACGCCCAAGTGGTGACGGTCAATTCCCGTGGCGAGATGGAAATCGTCGATTCCATGGTGTTTGGTGAAGCCGTGGACGCGGGTTCCTTGGGTGAGGACTCGAAAGTTTACATTTCCGAGCACATCCTCGCTTCGCCCGGTCAAGATCAGTCCGACGACAACGAGGGAATGGAAACGGTGGAGCACATCATCATAGACGGGGAACAGATCCGGTTCGAAAACGAAGACGACGACGAAATGACGGAGGGCCTCACCAGCGAGGCCCTGTCCGAAGGCGAGACACAAACCATAGAAACGCCCGATGGGCCCATGCAGCTCCTGCGAGTCCGCATTCCAAACGAGCAGGGGGAAGAGGAGGAGGCGTGGATCAAGATAGTTTAA
Protein Sequence: MSTPTSLCLICNSSCASSRNSIQIFNKDAKTFSDSQLSVTVGKVLDKEIKEESAPTQVVCKKCYKLVDEADELEQRLHELKADLMNNFLKSSKQRNTDGPSENTSEESKEHDLPRKILDIPSSDDDSSQVNTDSKIPMQVSIQDIEMELVKIHGGSEDATSPKEGSQEVSGQTFFTTDVIDSGAIEHSSDSDYEPPNKREGFMRNIGEVRVKIEAPNDAGSSSDKPNILKKRTVIQQATESITIKQEPINPAQQFIARQDSVFSCLLCQGDETVAGDVRAITAHMRSVHELRLYICDVCGQDFRKRNELSSHLDEHVAAEEGDFQCEVCNRIFSNLRLFRIHRRMHYPQNKAWPCDVCGKKYSSRNLLEEHMNTHSGIRPYVCQQCGKDFASKYTFRAHEKTHEVRPRPYGCGHCSKSFLSQQNLVQHERTHSGIKEFSCHLCSKRFGSAHNLEVHSIVHTGYKPFVCEICNKAFARKAEIRDHARTHTGERPYQCETCGATFSQRSNLQSHKRATHLDDKRYICMDCGKGFKRRRLLDYHMKAAHTGERPFKCNICDATFVYPEHFKKHRRIHTGEKPFLCEVCGKAFNSRDNRNAHRFVHSDKKPYECLVCGAGFMRKPLLYQHMTTQNHLNDTIVVNQPRLTTDDAQVVTVNSRGEMEIVDSMVFGEAVDAGSLGEDSKVYISEHILASPGQDQSDDNEGMETVEHIIIDGEQIRFENEDDDEMTEGLTSEALSEGETQTIETPDGPMQLLRVRIPNEQGEEEEAWIKIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -