Amac022754.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anaspis maculata
Gene Symbol
-
Assembly
GCA_949128115.1
Location
OX421964.1:66760922-66774292[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 3e-05 0.0017 19.9 2.3 1 23 138 160 138 160 0.99
2 16 0.00036 0.02 16.5 6.1 2 23 167 188 167 188 0.97
3 16 0.037 2 10.2 4.4 1 23 196 218 196 219 0.95
4 16 0.0024 0.13 13.9 4.1 1 23 285 307 285 307 0.99
5 16 2.9e-06 0.00016 23.2 5.5 2 23 314 335 314 335 0.98
6 16 0.00028 0.016 16.9 4.5 2 23 352 374 351 374 0.97
7 16 0.00018 0.0099 17.5 2.6 1 23 478 500 478 500 0.96
8 16 0.0029 0.16 13.7 1.4 1 23 506 529 506 529 0.93
9 16 4.6e-06 0.00025 22.5 0.8 1 23 534 556 534 556 0.98
10 16 4.5e-07 2.5e-05 25.7 1.5 2 23 568 589 567 589 0.97
11 16 5.8e-08 3.2e-06 28.5 0.8 1 23 596 618 596 618 0.98
12 16 6.9e-05 0.0038 18.8 1.6 3 23 630 650 628 650 0.92
13 16 0.00043 0.023 16.3 5.1 1 23 656 678 656 678 0.99
14 16 5e-05 0.0028 19.3 4.0 1 23 684 706 684 706 0.98
15 16 1.7e-07 9.5e-06 27.0 0.2 1 23 712 734 712 734 0.99
16 16 0.00056 0.031 16.0 0.1 1 23 740 764 740 764 0.92

Sequence Information

Coding Sequence
ATGATAAACAAGCCGACGGAGCTGGTGATCGACAAGATCTGCCGTTCGTGCATGTGCCAAAATGAGAGCATGCGGAACGTGTTCGATTCCAAAGAGCTTGGTGGCCAGACTCTTCAGATTGCTGAAATGCTGATGGATTGCGCTGCCGTTGTGGTCGCTTCCGGAGATGGCCTTCCGAACCTGCTGTGCGACAACTGCGAAAGCAAGCTCAGCGCGGCGTACGAGTTCAAGCACCAATGCCAAAAATCCGATCACACGCTGCGCGAGCTCACCAACCAGAGCGACCCGTCCGTCGTCAAAGAAGAGTGCCAGGACATCGTGGTGCAGCCAGACTTCAACATTCCGGAGATCTACGAGGACACCGACAGCGACGACGATGACGACAAGGTGGACAAGCGCAAGAAGCAGCCCTTCACGTGCAACTTCTGCGACAAGGTGCTGCGCACCAAGAAGGGCTTGCGTATCCACCAGCGCCGGCACACCGGCGACAAGATGCGGGAATGCCACATTTGCAACGCTCAGTTCACGAGAACGCACCACTTGATCAGGCACATGAAGATACACAACAGCAAGCCGGACACCGGTCACGTCTGCGGCAGCTGCGGCGTGTCTTTCATGAAGCTCAGTCACCTGTTGTCGCACAAAAAAGTCCACCACAAACCCGGAGACGATGCGGAAAACGGTCAGCAATCCACCGCCGCCGATCACAGCGACCTGGACAACAATGACGTTTCCATGGAAATGGACGATTATGAAGACGACGATGACGACGAGGACGAGAACATCATAGACAAGTACTTCAGGACGAAATTCGGGAAAATcaacaaaaacagaaagaaaGACAAGGGCACGTACAAGTGCAAGTTCTGCCATAAAGTCATGACGACGTTTGTAGGGCTTAAGATTCACATGAGGCGTCACACCGGCTCCGATCTAGCCAAGTGTTCGTTGTGCGACAAGAGTTTCACTAAATCAAGTCACTTGAAGAGACACCTGCAAACGCACGGTATTAAGGAAGTCGAGAAACCCAAGCCTGCTGAGAAAAAGGTAATGGAATGCGAATTCTGCGATCGCAAATTCAAATACAAGAAGAGCTTCAATCACCACATGCAAACCGAACACGGCATGTCCGACGACGAAAGCGACGTACCTTTGAGCGCCCTGATTTCCAAAGCCGAAAAATCTTTCCCATCATGTAACAAAGCTTCGGAAAACAGCGAGGAGAAACCTGCCGTCACCGATGCTGTCGCGAAGACGGAAGATTTCAAAACGACCGAAACGACGACGCCGGCGACCGATTCGACGAATCTGCACGAAACCAAGGACATATTCGACGACGCCGCCGATCTTTCCGACCACGACGCGATGAAAGAGGACAGCCTGAGCGactcgccgccgccgcctccaccCAAAGCTGCCGCTCAAAAGTTGCACGTCTGTCACGTCTGCGAGGCGGCATTCGCGCGCGCCAACCACCTCACCCGGCACATGACGTTGCATCGTGCCCTGTTGATCCACAAGTGCGACAGATGCGACAAGGCCTACGCCACCGTCGAGCATCTGAGCAAGCACGTGGAAGAGGACCACATCAACAAGCCGTACGCCTGCACGATCTGCAACAAGCCGTTCAGCAGGGGCGAACACCTGATCAGGCACTTGAAGGTGCACCAGAACGGCTCCGACAAGGAGGAGAGCAACTTGACCTGTTCGATTTGCGAGAAGACGTTTAGCAGATCTGACCACCTGGCGCGGCACATCAAAATCCACCTTCTGCAAGACAAGCGGCACGTGTGCCCCGAATGCGGCAAAGCTTTCAACCGGCTGGACAACCTGAAGACTCACCAGAGAATCCACACGGGCATCAAAGATACCACCAAGTTGCATTTGTGCATTTATTGTGGAAAGGAGTTCAACAATTCCAGCAACATGatCGTGCATATGAGACGGCACACAGGAGAACGACCGTACAAGTGCAACCAGTGCGGCAAGGGATTCCCGAGGTCGCACGACCTGAAGTGCCACGAGAGGACCCATTCAGGAGAAAAGCCTTACCATTGCTCGTTGTGCGGCAAGTCATTCAACAAGAGCAACAAATTGTTGCGACACACCAGAGTCCACACGGGAGAACGGCCTTACGTGTGCAACATTTGCGGACGCGCTTTCACCCAATCCAACGATTTGGCTTTGCACATGCGAAGACACACGGGGGCGCGTCCGTACGCGTGCGGCATGTGCCCGGCCCGCTTCATCCAGTCGGGTCAGTTGAAAGCCCACAGGCGTTCCACCGGCCACTGGATGGAAACGCAACCGGATCTCAAGGGGGGCCACCGGGTGGAACCGGTCACGCCCGTCATCGAGCCGACGCCGATCAGATTCAAGACGCACGGCAAGCCCAAAGAAGAACTGGACGAGTCCAAGGCCTCGAAGCTGCTCGTCCAGACGGTGGGCCTGGTGAGCGGCCTCAACATACAGGGCGATTCGCTGGTGCTCGATCCGAAGATCGTCGATCTGCACGCGTCCGGTCTGCTCAGTCTCGTGGCAGCCGGCAACGAGATGAAGTTCAAACACGACGATTATCCTCCGACGATCATCAAAAGCGAAAACACCGGCAAGAACCTGGCGGGTGAGGGCAATAACGTTCCCGTCGGCCCCATCGTGTCTACCGCTTCGGTACCAACGATACCATTCCACCAGCAAACACCTGTGACGATGTCATATTCGATAGTGGCGCCGCCGCCGCACACGTCGACGGCGTTTCCCGCGTTCAATTACCAGAACTTTGGCTAA
Protein Sequence
MINKPTELVIDKICRSCMCQNESMRNVFDSKELGGQTLQIAEMLMDCAAVVVASGDGLPNLLCDNCESKLSAAYEFKHQCQKSDHTLRELTNQSDPSVVKEECQDIVVQPDFNIPEIYEDTDSDDDDDKVDKRKKQPFTCNFCDKVLRTKKGLRIHQRRHTGDKMRECHICNAQFTRTHHLIRHMKIHNSKPDTGHVCGSCGVSFMKLSHLLSHKKVHHKPGDDAENGQQSTAADHSDLDNNDVSMEMDDYEDDDDDEDENIIDKYFRTKFGKINKNRKKDKGTYKCKFCHKVMTTFVGLKIHMRRHTGSDLAKCSLCDKSFTKSSHLKRHLQTHGIKEVEKPKPAEKKVMECEFCDRKFKYKKSFNHHMQTEHGMSDDESDVPLSALISKAEKSFPSCNKASENSEEKPAVTDAVAKTEDFKTTETTTPATDSTNLHETKDIFDDAADLSDHDAMKEDSLSDSPPPPPPKAAAQKLHVCHVCEAAFARANHLTRHMTLHRALLIHKCDRCDKAYATVEHLSKHVEEDHINKPYACTICNKPFSRGEHLIRHLKVHQNGSDKEESNLTCSICEKTFSRSDHLARHIKIHLLQDKRHVCPECGKAFNRLDNLKTHQRIHTGIKDTTKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCNQCGKGFPRSHDLKCHERTHSGEKPYHCSLCGKSFNKSNKLLRHTRVHTGERPYVCNICGRAFTQSNDLALHMRRHTGARPYACGMCPARFIQSGQLKAHRRSTGHWMETQPDLKGGHRVEPVTPVIEPTPIRFKTHGKPKEELDESKASKLLVQTVGLVSGLNIQGDSLVLDPKIVDLHASGLLSLVAAGNEMKFKHDDYPPTIIKSENTGKNLAGEGNNVPVGPIVSTASVPTIPFHQQTPVTMSYSIVAPPPHTSTAFPAFNYQNFG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-