Amac015369.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421963.1:31068585-31082558[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.023 1.2 10.9 0.6 3 22 35 54 34 56 0.88 2 23 1.8e-05 0.001 20.6 0.2 1 23 61 83 61 83 0.98 3 23 1.3 71 5.4 6.4 1 23 89 112 89 112 0.96 4 23 0.0086 0.47 12.2 0.9 1 23 117 139 117 139 0.98 5 23 1.1e-06 6.3e-05 24.4 0.7 1 23 144 166 144 166 0.96 6 23 8.1e-06 0.00044 21.8 3.1 2 23 175 197 174 197 0.96 7 23 0.089 4.9 9.0 0.0 3 23 207 226 206 226 0.98 8 23 2.9e-05 0.0016 20.0 1.3 1 23 232 254 232 254 0.97 9 23 0.00018 0.01 17.5 1.3 1 23 260 283 260 283 0.95 10 23 1.1e-07 6e-06 27.6 2.4 1 23 287 309 287 309 0.98 11 23 8.5e-06 0.00047 21.7 1.7 2 23 318 340 317 340 0.96 12 23 1.4 76 5.3 0.0 3 23 350 369 349 369 0.84 13 23 2.6e-06 0.00014 23.3 1.2 1 23 375 397 375 397 0.97 14 23 8.7e-05 0.0048 18.5 1.8 1 23 403 426 403 426 0.96 15 23 3.6 2e+02 4.0 0.4 1 9 432 440 432 444 0.88 16 23 0.22 12 7.8 1.4 2 23 444 465 443 465 0.96 17 23 0.0027 0.15 13.8 0.8 3 23 472 493 470 493 0.94 18 23 0.0014 0.076 14.7 2.5 1 23 499 521 499 521 0.94 19 23 0.01 0.57 12.0 2.1 3 23 529 550 527 550 0.95 20 23 0.0016 0.09 14.5 4.9 1 23 555 577 555 577 0.97 21 23 0.0039 0.21 13.3 0.4 1 23 586 608 586 608 0.99 22 23 4e-05 0.0022 19.5 0.3 1 23 615 637 615 637 0.98 23 23 3.3e-05 0.0018 19.8 1.4 1 23 643 665 643 665 0.98
Sequence Information
- Coding Sequence
- ATGCAACAATCATTTCCACAGTATCTTACCAAACCGGATTTAAAGTTGAACTCGGAAGTGATCAACTGGACCTTAAAAAGATTCGACGAGCAACAGAATATGTGTTTGCTTTGCAACAAGACATACGCCACTCGCAGGAGCTTCCAGGCGCACAAGTATGCAGTCCACAGTGAGAAAATATATCCCTGCCCATTTTGTAACCGAATGTTCAACCTTCCTGGGTCCTTGAGAAAGCACATGGACATTCATGCCTCAGAGAAGAACTATCACTGCGTTGAGTGCGATCTGAAATTCCAAACTTATTGCTTGTATAACAAACACAAAAGAGAACAGCACGATGGAAAAGAGTACACATGCAAATACTGCGGCTACAAAACTGCAAGCTCCAATGATTCGGCCAGACATTTGAGAGAGCACACTGTTCAGATGTTCGCATGTGAATATTGCGAAAAGGTGTTCAGGCAAAAAGGAAATTTGAAGCAGCATCTCACTGTTCATGGAGTTGGATCTAGCAATAGAGTATCTTGCCATCTATGTGAAAAGGTTTTCACAAAGAAATCCACGCTGAAAGTGCACATTAGAAAGTTCCACGAAGGAAAGAGAGACATGCCTGAGTTATGTGAAGTTTGCGGCAAAGATATCTCGAAGGCAGGGCTGGTGGAACATATGCGAGTTCACAAGGGCGATAAGAAGCACACTTGTGAATACTGTGGAAAGGGTTTTGTTAAAAAGGCTACACTGCGGATGCATCTTACCGTTCATACCAAAGAGAAGCCGCACGCGTGTAAGCTGTGTGATAAAAGATACACCCAAAGGAACTCTTTAGTCATTCATGTGCGATCTGTCCATACAGGTGTGTACACATGTGAACACTGTGGAAAGGTATTCAAGCAGAAAGGAAATCTGAAGCAACATCTTACTGTTCATGGAGTCGGACCGAACATTAAAGTATCTTGCCATTTATGTGAAAAGGTGTTCGCAAAGAAATCCACGCTGAAGGTGCACATAAGGAAGCTCCACGAAGGAAAGAAAAGGCTGCCTGAATTGTGTGAAGTTTGCGGGAAAGCAATCGCCACCAAGGGCTTGGTGGAACATATGCGAGTTCACGCGGGTGATAAGAAGCACACTTGTGAATATTGTGGAAAGGCTTTTGTCAGAAAGGGTACGCTGCGGATGCATCTTTCCGTGCATACCAAGGAGAAGCCGCATGCCTGTAAGCTATGTGAAAAAAGATACACCCAGAGGACGTCTTTGGTGATTCATATGCGATCTGTCCACACAGGTGTAAGACCTTATGCGTGTCATATATGCGATAAGCGGCGAGCCAAACCATGTAAAGTGTGCAAGGAACCTTGCGCCGACAAGCTTGAAAGAAGGCGACACTATCGTGCGCATCTGGAAAAAAGGCAGCACTGCTCCGATTGCGGTCAGAAGTTTAAAGCGCTTTGGGAACTAAAAAAGCACGTCACTGTTGttcaccgatccgacaggccgCACATTTGTAACGTATGCTTCAAATCGTTCAAAACAACCACGACTTTGAAGACGCACGTGGGAATTCACACTCGTGAAAATTACTCTATTTGCGACATTTGCGGCAAAGCCTTTGCATGTAAaaccaaactcaaaaaccacaaGAACGTCAAACACGAAGGAATGAGGCACATCTGCCAGGTCTGCAAGAAGGAGTACAGCAATCTAGATCACTATAAACTACATTTAAAAACACACGAGCCGGGCTACGTGCAAACCACATATACTTGCGAGATTTGCGCTAAAGTGCTGATGAGCGCCAAAACTTTCTCTAATCACATGAACAGTCACAAAGGTCTGGTAAATAAGTTTGTCTGTCAGGTTTGTGGGAAAAGTTTGACGCAACTGAAAGGTTTACGTGAACATGAGCGAACGCACACGGGCGAACGTCCTTACGTTTGTGAAGTTTGTGGCAAGACTTTTTATGCGAAAAAGCATTTGGTGCAACACAGTCGGGTTCATGTAAAGGAGAAATCACGATCGACATCTTGA
- Protein Sequence
- MQQSFPQYLTKPDLKLNSEVINWTLKRFDEQQNMCLLCNKTYATRRSFQAHKYAVHSEKIYPCPFCNRMFNLPGSLRKHMDIHASEKNYHCVECDLKFQTYCLYNKHKREQHDGKEYTCKYCGYKTASSNDSARHLREHTVQMFACEYCEKVFRQKGNLKQHLTVHGVGSSNRVSCHLCEKVFTKKSTLKVHIRKFHEGKRDMPELCEVCGKDISKAGLVEHMRVHKGDKKHTCEYCGKGFVKKATLRMHLTVHTKEKPHACKLCDKRYTQRNSLVIHVRSVHTGVYTCEHCGKVFKQKGNLKQHLTVHGVGPNIKVSCHLCEKVFAKKSTLKVHIRKLHEGKKRLPELCEVCGKAIATKGLVEHMRVHAGDKKHTCEYCGKAFVRKGTLRMHLSVHTKEKPHACKLCEKRYTQRTSLVIHMRSVHTGVRPYACHICDKRRAKPCKVCKEPCADKLERRRHYRAHLEKRQHCSDCGQKFKALWELKKHVTVVHRSDRPHICNVCFKSFKTTTTLKTHVGIHTRENYSICDICGKAFACKTKLKNHKNVKHEGMRHICQVCKKEYSNLDHYKLHLKTHEPGYVQTTYTCEICAKVLMSAKTFSNHMNSHKGLVNKFVCQVCGKSLTQLKGLREHERTHTGERPYVCEVCGKTFYAKKHLVQHSRVHVKEKSRSTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -