Amac015368.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- zfh1
- Assembly
- GCA_949128115.1
- Location
- OX421963.1:31057415-31067959[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 38 0.0016 0.088 14.5 0.1 1 23 11 33 11 33 0.98 2 38 8.2e-05 0.0045 18.6 3.2 1 23 39 61 39 61 0.97 3 38 7.4e-05 0.004 18.7 0.5 1 21 67 87 67 88 0.95 4 38 6.4 3.5e+02 3.2 3.6 2 23 93 114 92 114 0.96 5 38 0.00019 0.01 17.4 8.2 1 23 119 142 119 142 0.97 6 38 0.00038 0.021 16.5 0.3 3 23 149 169 147 169 0.92 7 38 0.00028 0.015 16.9 1.6 2 23 174 196 173 196 0.95 8 38 0.029 1.6 10.6 4.9 1 23 201 223 201 223 0.98 9 38 0.052 2.9 9.8 0.5 1 23 232 254 232 254 0.98 10 38 9.9e-05 0.0054 18.3 1.3 1 23 261 283 261 283 0.97 11 38 0.026 1.4 10.7 0.8 1 23 289 312 289 312 0.95 12 38 0.0032 0.18 13.6 0.5 1 23 318 340 318 340 0.94 13 38 0.00011 0.006 18.2 3.6 1 19 346 364 346 367 0.94 14 38 0.075 4.1 9.3 5.4 1 23 441 464 441 464 0.97 15 38 0.0012 0.067 14.9 0.7 1 23 469 492 469 492 0.98 16 38 0.011 0.62 11.9 1.3 1 23 497 519 497 519 0.98 17 38 0.00092 0.051 15.3 1.2 1 23 525 547 525 547 0.98 18 38 0.00017 0.0096 17.6 0.5 1 21 552 572 552 573 0.96 19 38 0.0018 0.098 14.4 2.8 2 23 581 602 581 602 0.97 20 38 0.21 11 7.9 4.2 1 23 606 629 606 629 0.89 21 38 4e-06 0.00022 22.7 2.6 1 23 634 656 634 656 0.98 22 38 0.035 1.9 10.3 2.1 2 23 666 688 665 688 0.96 23 38 0.01 0.56 12.0 1.6 1 23 694 716 694 716 0.98 24 38 0.0025 0.14 13.9 0.3 1 23 740 763 740 763 0.95 25 38 2.7e-06 0.00015 23.3 3.7 1 23 769 791 769 791 0.98 26 38 0.00076 0.042 15.5 0.3 2 23 798 820 797 820 0.96 27 38 0.0041 0.22 13.2 4.5 1 23 825 847 825 847 0.98 28 38 0.0073 0.4 12.4 4.3 2 23 870 892 869 892 0.95 29 38 0.00027 0.015 16.9 0.8 1 23 902 924 902 924 0.97 30 38 1.1 58 5.6 0.0 3 23 931 952 929 952 0.93 31 38 1.1e-05 0.00061 21.3 2.1 1 23 957 979 957 979 0.98 32 38 0.035 1.9 10.3 1.1 1 23 985 1008 985 1008 0.96 33 38 1.1e-05 0.0006 21.3 0.9 2 23 1014 1035 1013 1035 0.98 34 38 2.7 1.5e+02 4.4 1.8 1 23 1044 1066 1044 1066 0.97 35 38 0.001 0.056 15.1 1.4 1 23 1073 1095 1073 1095 0.98 36 38 8.5e-06 0.00047 21.7 2.8 2 23 1102 1123 1101 1123 0.96 37 38 0.00051 0.028 16.1 6.4 1 23 1129 1151 1129 1151 0.98 38 38 0.007 0.39 12.5 2.6 1 19 1157 1175 1157 1178 0.94
Sequence Information
- Coding Sequence
- ATGCTGGTGCACAAAGGCGAagagaaaaaatatatatgtgAGACATGCGGCAAATCGATCGCAACCATGGGGAGCTACAAGGACCACTTGAGGGTGCACAGTGGTGACAAGCCTTTTGCATGTGATAGGTGTGATAAACGGTTCAGTGTGAAGAAGCATCTGACACGCCATACCCTAGTGCACACGAAAGAAAGACCGTTCAGTTGCACAATTTGCAAAAAGACTTTCACTCAAAAGGGTTCGGTCAAAATTCATATggccaaattaccgAAGTGGACATGCCAGACGTGCAACTTGAGCTGCGGAAATCGTGTGCGCTACTACAACCACAGGCGGCAGCACAAGGAGAGGACGCATGTTTGCGAACATTGCGACAAAAAATTTAAACAGCGACGCCACCTGAAGGACCACATCAGCACCTTTCACGTGGTTGAACCTCTGCCTTGTATCATTTGCGACCAACAGTTCCCGTCAAAGTCCTCGCTGACGCGACACATGACCAGTCATGCCAGACTGTTGAAGTGTGAAGATTGCGACCATACCTTCACCTTTCCCTACGAGCTCAACGATCACCGGTCAAAAGAGCATGAAGGAGTTCGTTTCTATTGCGAGCATTGCAACAAGTTCTACAAGGGCGTCAAGGTATTCAAAAAGCACATGAAGATCCACGAACCGGGATACGTCCGGAAAAAGTACGTGTGCGACGTATGCTCGAAAGTTATTTATACCAAATTCAATTACGATATCCATAAGCAAGTGCACGAAGGCGAAAACAAACATCACATGTGCGATGTCTGTGGGAAGGTGTTATCCAGCGCCGGGTGTTTGACGCGCCATTTGAAGGTGCACACTGAAGAGAAGCCGCACATGTGTGATGTTTGCGGTCTGCGATTCAGGGATATCAAGAACATGGGCTCGCATAAACGTTTGGTGCATCTCAAAGAGAAAAATTACATATGCGGCATTTGTGGAAGAGGATTTTCAACTCAGACATCGTTGTCGTTTCACGTCAAGTATCATATGGACGATAGACCGCATAGTTGTCCGGACTGTGGCAAGAGTTTCATCAGAAAAGGCCAGCTCCGGTCACACAACTGTCACGTCAAAGTGGTGCAAATTGTTATTGAAGAGGAACCAGTACAGAATGCGCTAGAGGATAATCTCGAAGATGCCGTGACCGAAACGCTAGACGCTTTCAACGGTTCAGACAGCGCAACAGAAACACTGACGGTGATCGTAGAAAAGTCTGAAGTTGCACCAGAGTCGCTGACTGAGAATGTATTGTTGCAATTCGACGGAGCTTTTGTAGGGCTATCGGTATATCCTTGTGATTCTTGTTCAGAAGTATTCAAACATTGCGCCAAATTACGGAGTCACAAGCAGAAATTCCACGGCACCGAACTGTATTCCTGTGATGTTTGTTCGGAGGCGTTCAGTAGTTACGAACAGATGCGGTCTCATAAGCAAACACTTCATGCTTTTAAGTCGTACAGTTGCAATGTCTGCGACCAAATATTCGAAAACTACAAGAAATACTGGGATCATAAGCAAAGTCATCAGCAATCCAAAACTTATTCCTGTGAAGTGTGTGGCGCAAGCTTCTCGAAGTACAAACAATTTTGGGATCACAAACAAAAACATCAAAATTTGGAATACGTATGCGACCACTGCGATAGGGCGTTTTCCAATTACAAAGCTCTCTGGACGCATAAACGTGAACTGAACGCAGATGTGGAAGCACGCTGTGGAACATGCGACAAGTTTTTTGTGGATACGCACAAACTTGAGCGGCACCAAGCGAAGCATGCCGAAACTTTCGACTGCCAGCTTTGTCATCAAGAGTTTCAGTCCAAGTACCAATTGGAACAGCACAGCTTGGCCTGTCATGACGGCAAGAGGTATGTCTGTGAACACTGCGACAAAAGCTTTAGAGATAAACCTTCCTTCACGAAGCACGTGAAAATCCACGAACCCAACTActcggaagaaaaaattacttgcGAGGTCTGTTTCGATAAGTTTTCATCGTTGAaacatttgaaggtgcatgtcAAGACCCAGCATTGGGATCGTGACTATTTCATTTGCAGTGTCTGCGATAAGAAGTTGACGACACGCGAAGGCCTGATATGCCACTTGAGGACACATACCGGAGAAAGACCATGTTCTCCTGATTGGAAACAGTTTCTGCCCGACGCTTCTGACAACGAAGGATCATTCATGTGTGAAGTGTGCAACAAACTTTTCACATTAGAAGCATCGCTCAAAAGGCACACGGCTAGCGTTCATCAAAATTTGAAGCCGTTTTCTTGCGAAACTTGCCACAAACCGTTTGCTCGGCGGTACAACCTGAAGAAACACATGCTGTCCCATAGTAGCGAGTTCCAGCTGAAATGCGACAAGTGCCCGAGAGGCTTTCGCATTAGTGCTCAACTAAGAGAGCACGTTCGAGTATTTCATGATAGTAAACGCTTCAAATGTGAAATTTGTCGCAAAGTTTTCCGGAGCAGCGAAAGTTTCCGGTGTCATCAAGAGACGCACGAGAATGCCGCTATCGAACAAGTCGAGCCAGACATCGAACTGTCAAAATTAGAAGAAGGCAACATCCAGTGTCAACATTGTCCCAGAAAATTTTTCACACCGAATTCGTTGAGCCATCATATCTTTCGCAGCCATCGCGAATTGAAAAATGCCGCAGCAAAATTCATCTGTTCGGTGTGCTCGAAGAGCTACGTGTCCCAAGGGCAACTTTCAAGGCATAAAACGATGCACAGGGAAAAAAACATTGCTTGTAACGTATGCTCGGTGAAGTTCTTGTTGCCTTCTCAACTGCGGTACCACATGGTCATCGCGCACAGCGTTCCCAAATACACTTGCAACTATTGCGAGAAGAAATTCAGAACAAAACCTTCGTACAGAAACCACATGGCAATTCATACCAAGAACTATCCGTTCTCTTGCAAAACCTGCGGACAAGGATATCACAAACAAGAGATGCTTGTGCAGCACGAGCAGTCGGCCCATTTGGGGTCACGGGTCAAGTGTGAAGTCTGCAGCAAAACTTACACCAACGTTTCTTacttgaaaattcacatgaagaCGCACGATCCTGATAACACTAAAGTGGAGTACACATGTCCCGTTTGCTGTAAAGTCATTTACATTCGCAGGAATTACGAAAATCACGTGAAAAGTCATGCTGGCGAAGGAAAAGTTTATATCTGTGATACTTGCGGGAAAAAACTGACAACGCTTGCGAGTTTTCAGTATCACACGAAAACTCACACGGGAGAGAAGAAATGCGTTTGTGAAACTTGTGGAAAAACGTTCATCGATAAGAAAAATTTGAGGGTCCATAATCGTACTCACACCAAAGAAAAACCGTATTGTTGCTCCATTTGCAACAGCAGCTTTACTCAATGTAGCACACTCACTGTGCACATGCGTTACCACACAGGAGAACGTCCGTATAAATGTGAGCTGTGCTCGAAAGGTTTTGTCACAAGAACACTGCTCAAGAATCACAATTGTAAAGTTTTGTCTTCTAGTCAGTAA
- Protein Sequence
- MLVHKGEEKKYICETCGKSIATMGSYKDHLRVHSGDKPFACDRCDKRFSVKKHLTRHTLVHTKERPFSCTICKKTFTQKGSVKIHMAKLPKWTCQTCNLSCGNRVRYYNHRRQHKERTHVCEHCDKKFKQRRHLKDHISTFHVVEPLPCIICDQQFPSKSSLTRHMTSHARLLKCEDCDHTFTFPYELNDHRSKEHEGVRFYCEHCNKFYKGVKVFKKHMKIHEPGYVRKKYVCDVCSKVIYTKFNYDIHKQVHEGENKHHMCDVCGKVLSSAGCLTRHLKVHTEEKPHMCDVCGLRFRDIKNMGSHKRLVHLKEKNYICGICGRGFSTQTSLSFHVKYHMDDRPHSCPDCGKSFIRKGQLRSHNCHVKVVQIVIEEEPVQNALEDNLEDAVTETLDAFNGSDSATETLTVIVEKSEVAPESLTENVLLQFDGAFVGLSVYPCDSCSEVFKHCAKLRSHKQKFHGTELYSCDVCSEAFSSYEQMRSHKQTLHAFKSYSCNVCDQIFENYKKYWDHKQSHQQSKTYSCEVCGASFSKYKQFWDHKQKHQNLEYVCDHCDRAFSNYKALWTHKRELNADVEARCGTCDKFFVDTHKLERHQAKHAETFDCQLCHQEFQSKYQLEQHSLACHDGKRYVCEHCDKSFRDKPSFTKHVKIHEPNYSEEKITCEVCFDKFSSLKHLKVHVKTQHWDRDYFICSVCDKKLTTREGLICHLRTHTGERPCSPDWKQFLPDASDNEGSFMCEVCNKLFTLEASLKRHTASVHQNLKPFSCETCHKPFARRYNLKKHMLSHSSEFQLKCDKCPRGFRISAQLREHVRVFHDSKRFKCEICRKVFRSSESFRCHQETHENAAIEQVEPDIELSKLEEGNIQCQHCPRKFFTPNSLSHHIFRSHRELKNAAAKFICSVCSKSYVSQGQLSRHKTMHREKNIACNVCSVKFLLPSQLRYHMVIAHSVPKYTCNYCEKKFRTKPSYRNHMAIHTKNYPFSCKTCGQGYHKQEMLVQHEQSAHLGSRVKCEVCSKTYTNVSYLKIHMKTHDPDNTKVEYTCPVCCKVIYIRRNYENHVKSHAGEGKVYICDTCGKKLTTLASFQYHTKTHTGEKKCVCETCGKTFIDKKNLRVHNRTHTKEKPYCCSICNSSFTQCSTLTVHMRYHTGERPYKCELCSKGFVTRTLLKNHNCKVLSSSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -