Basic Information

Gene Symbol
-
Assembly
GCA_949128115.1
Location
OX421962.1:6602571-6605696[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-11 1.2e-07 32.7 1.7 3 114 10 115 8 117 0.89
2 2 4.1 2e+04 -3.5 0.1 52 64 347 359 318 374 0.69

Sequence Information

Coding Sequence
ATGATGGCGAATAAAGTGTATAACGTATCAAAGGTTTGGTTGTCGACGGACAAATACTTTGAACTGATCGTCAATAAAGACGAAGAAAAATGTTCCAAATATCCGCCGGTCAAGCCAAATCCTGGCGAGATTTTCATAATAACAAGTTCCAACCTTGAAGACTGGAAAGTGGACCAGTACCGATGGAGACATTATGGAGTTAAATTGATCCCCAAAAACCATCCCATTCTGATCTGTCATTATTTCAAGTCGATAGCTTGTCGGAACTTTCACAAGCGAGCTTATGTTATTTATACCGGAGATGAGAAAAAAATATACGCCGGCACAACACTAGTGCACTATGTTGGATCAACAGAAGACTACGAACATTTGCCTCACGGCAATAAAAGGAAATGCCTTCAACAAGAACACATAACAACCGCAAAGTCCCAGATCGAGAGACAAAAAAAAGCATTGAAGGAAGAACCACAAGCAGTTTATAAAAAGTTGGCAACAGAAGACGTAGACCCTTCGCTGATGGCAGTGTTGTTGCCCAGAGATAGAACGCAAGTGAGCAATACAATCATAAAAGAAAGGGAGAGAAAGTTACTTTCTTCTGATGATATCATCGGGCTCTACGTTTTAAAAGATGAACTGAAAAACTTCATCCATGTGATGGATTTGCTGCCGCATTTTGTTGCGATTCTGGTTAGACCGGAGTCGCACAAACTATTTCAGGAAGCTTGTGCAATAAGGAAATGTGTTGTCCAATACGACACAACTTTTCTGTTGGGGGACTTTTATCTCTCAATCTTTTCATACCAGCACTCGTTGTTTTTTCACAACAATATTGAAACACGGCCGACAATACCGTTGTTCTATGTCGTACATCATGAGAGATTCAAAGAAGTACACGGTGTTTTCTTCAAATGGCTGAAAACTTATTCCAAAGCTCTGTTTCAATGCCCGATTGTGACGGACAGAGAAAAAGCCATCATACACGCCATCAGAGAGCAGTTCCCCAATGCCCAACATGTGTTTTGCTGGAACCATATGATTAAAGACGTCCAACAGTGGCTGAAAAGACAGAAGAATGTCGACACGGAAGATTTAAAAATATATAGCAGCCATATCTGGGACTTGCTAGATAGCAGAAGCGAGGAACAGTtcgaacttaaattgaacaacATGTCGAAAAGGTGGAGCCAACCGTTCAAAGAGTATTTCGAAGCACACCTTCGCAAAGACATGTTAAATTCGGCGAGGTGGATCTTGGAGCTGTATGGAATTTACAAGCGGCGCAGTGGCATCACCACCAATTCTGCCGAGAGTTTGAACAGGGTGGTAAAACGATTCATAAACAACAAAGAAGTCAAGTTACAGGCTCTTGCTCTCTCCCTGTACCATCTCGATGTTATCACGCAAAAGGAAGTGTTACGTGGTTTCTGCAATCAAGGCAATTTCAAGCTCCTCGATCCACACATGCAGAAGGACATAGAGAGCATGGCTTTTCCTAAAAGTCAATTTGATGTAGACGATATTCCATATGTGTTCCACAACAACGACCACAAGATGATCAAGACATCTGAAATGCCTTTCACAAACTTTAGCGTGGCTAACCAAGTTGTGCAAGAAGGACGTGTGAAGTTGCTGCCCGAGGACGGCGTGTTTTTGGTGGCATCAAGAGAAAATGATAAATTTCTCGTATCTCTCCATCCAAAGGAGATTTGTTCTTGCCGGGTGAAACGAGGTTGTTATCACATACAAGCTGCACGCTTGGCCATTGGTCACAAACAAATACCACATAAGACTGCCAAGTTGTCCACAGTCATGAGGCGTGAACGGGGTTGCAAATCAGGAAGAAAAGGCGATCCCACCAACATTAAAGTGGTAGAGGCCGCCGAGGACTCGATAACCACAagagaaaaaaacgaaaaaagaaCCTTGTTGGTGCCCACAATTGAAGGAGGAGTAGTCAAGAAGAGATTTGTTGATCCTTTCTCTACGAACGAGTCGTTGAATTTGTCCGAAATCGGCCCTCTGAAAACTTCCACACCAACGAAAGCCTATCGTCTGTCTTCTCCTATCGACCTGTGTGATCAGGATTCCGATGACGACGCTCCTTTACAGCCGACAAGCCACAAATATCACTACAACGTTCATGGACGCGTCGTGCTAGAGAGCGACTTGAAGACACTGGTTCCTGATTCACCAGCAAAGTCTAAGGATTTCTACCTGAGCGACGGAATTTTAGATGCTCATTTCTTGGCTCTTTGTGTTGAAAACACTGCCAGATGCCGGGCCGTGACCGTTTTCCCAGTCGAAAGCGTGTATGTGAATTTTCCGGGTAGATGCGATGCTGTGGAAAATGGAGTCATTCACTTTACCCGCGATAAAGTTTCACTTAAAGATGTCGTGATTCTGCCGATTCTCGATCACAGTCATTGGACTGTCATGCTTATTCTTCGAAAGCAAAAGACGTTCGTGCATCTCGACAGTTTGTTCCGAAACAATCTGCCAGAGGAgaagatcgaatttgtggtcAAGCTGTATGCAATGTCCATGCAAATGGAGGGCAAGACGTTTCATCCAGATGAATGGACTCTCTTGAATCCCCGTCATGACCTTAAACAGAAGAACAGTTACGATTGCGGAATGTTCTGTTGTATGTATGTCGAAATGTTACTCACGCAGAACGACTGCTCGCATTACACTAACGACATGACGACGTACAGGAAAATCATCGCAAAGAAACTGAAGGCACTTGCAGCAGGAAGCGAAAGCGATTTTCCAGAGAAGACGGAAGAAAAGACAGGAACCAAGTTGATTCTTCCAACACTAGCAGTAACCGACCTTAAATTAGAGTCACCGAACATGACCAACGGAAGGCTGGCGTCTTTCCTCACCGGAATCATTGGATCGTATTGGGACGAAGACACAGGATCTGTCTGTTTCTTGAAAAACAAGTGTACTAATGTCGGAGGAAAACTGGTTCTTTGCAGCGACTGCGACCACTGGTACCACATTTCCTGTATTGACGGAAAAGTCGACGACGATGACGACTTCACTTGCGAAAGTTGCATGAAATGA
Protein Sequence
MMANKVYNVSKVWLSTDKYFELIVNKDEEKCSKYPPVKPNPGEIFIITSSNLEDWKVDQYRWRHYGVKLIPKNHPILICHYFKSIACRNFHKRAYVIYTGDEKKIYAGTTLVHYVGSTEDYEHLPHGNKRKCLQQEHITTAKSQIERQKKALKEEPQAVYKKLATEDVDPSLMAVLLPRDRTQVSNTIIKERERKLLSSDDIIGLYVLKDELKNFIHVMDLLPHFVAILVRPESHKLFQEACAIRKCVVQYDTTFLLGDFYLSIFSYQHSLFFHNNIETRPTIPLFYVVHHERFKEVHGVFFKWLKTYSKALFQCPIVTDREKAIIHAIREQFPNAQHVFCWNHMIKDVQQWLKRQKNVDTEDLKIYSSHIWDLLDSRSEEQFELKLNNMSKRWSQPFKEYFEAHLRKDMLNSARWILELYGIYKRRSGITTNSAESLNRVVKRFINNKEVKLQALALSLYHLDVITQKEVLRGFCNQGNFKLLDPHMQKDIESMAFPKSQFDVDDIPYVFHNNDHKMIKTSEMPFTNFSVANQVVQEGRVKLLPEDGVFLVASRENDKFLVSLHPKEICSCRVKRGCYHIQAARLAIGHKQIPHKTAKLSTVMRRERGCKSGRKGDPTNIKVVEAAEDSITTREKNEKRTLLVPTIEGGVVKKRFVDPFSTNESLNLSEIGPLKTSTPTKAYRLSSPIDLCDQDSDDDAPLQPTSHKYHYNVHGRVVLESDLKTLVPDSPAKSKDFYLSDGILDAHFLALCVENTARCRAVTVFPVESVYVNFPGRCDAVENGVIHFTRDKVSLKDVVILPILDHSHWTVMLILRKQKTFVHLDSLFRNNLPEEKIEFVVKLYAMSMQMEGKTFHPDEWTLLNPRHDLKQKNSYDCGMFCCMYVEMLLTQNDCSHYTNDMTTYRKIIAKKLKALAAGSESDFPEKTEEKTGTKLILPTLAVTDLKLESPNMTNGRLASFLTGIIGSYWDEDTGSVCFLKNKCTNVGGKLVLCSDCDHWYHISCIDGKVDDDDDFTCESCMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00078459;
90% Identity
iTF_00078459;
80% Identity
-