Amac021171.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421964.1:34728830-34730599[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-08 2.6e-05 25.1 0.0 4 39 21 56 18 59 0.92 2 2 9 4.6e+03 -1.3 0.0 3 12 425 434 424 435 0.87
Sequence Information
- Coding Sequence
- ATGCCGCGATTGTATAGGCGACAGCTTGGATCGCGTCGTTACCGCGATTACGACCAAAACACGTTGGAACAAGCTTTGACAGAAGTTGCCAACGGCACCCTTAGCTTGAGAGAAGCCGAAACTCGTTATAACATTCCTCGAGCCACCCTTAACCGGAAATTTCGGGGGCTAAATCCCAATGCACCTGGAAGACAACCCGTTTTAAATGTCCGTGAGGAAAAAACGATAGTAAAGGCGATCTTAAAGGCAGCTGAGTGGGGGTACCCTTTAACGAACACTGATATACGGGATTTGGTCAAGAGATATTTGGATCGGAGGGGTATCAGGGAGAAACGGTTCAAAGAAAATCTACCAGGCTACGATTGGATACAATCGTTTTTGAAAAGACAAGGCGATTTAACTACAAGAATGGCTCAAAACATCAAACGCTCTAGAAGTGAAGTCACAGCAGTGGAAATAAATGAATACTTTGACCATTTGGAACAATCCTTACAAGATGTTGACCCGGAAAATTTGCTGAATTATGACGAGACTAATCTAACCGATGACCCAGGGCAGTCCAAAGTTGTTGTTCGTAGAGGTGTCAAAAGGGCGTTTAGAGTCATGGATCATTCTAAAGCGTCAACTTCAGTGATGTTCTCAGTCAGCGCCTCCGGCGAAACTCTGCCCCCCTACATCGTCTACAAGGCAAAGAACTTATATCCCGAGTGGATGGAAGATGGCCCAAACCATTGTGTGTACAACAGATCGAAAACTGGCTGGTTCGATGGGAACATTTTCGAAGATTGGTTTTATAAAGTCGCTATTCCGTATTTCAGAAATCGTCCAGGCAAAAAGGCTATGATAGGGGATAACTTGGCTGCTCATCTTTCtACCCAATTCCCAGCTTTACTAAAACAAGCCTTAGCCGATCTGCAAGTCAACGCCGAAAAAAATATCCAGTCTGGTTTTAGAGCCACTGGCATATTTCCAATCAATAGATTGGAAGTGCTAAAAAGACTTCCTGGGTACAATAATGAAcctgaagcaaatgacgaaatGAGCACGGCGTTTGAGGAATTGATCAAGAAGCACGTTGCAGTGACCACGTCGGTGGAACCtatgaagaaaagaaaaaaaatgaacatTAAGCCGGGTGAATCTGTCTCCGTAAACAGTTTGAATGCAAGTTTGGACAATAGCAATTTAAGCGAAGATAATGATGCACCTGCAGAAGAtcaagaagaagatgaagaacttCATCAAGAACCGACGGAAGAAGAAGAAAACAGCGATTATTTGGATGAAGCAGTTGAAATGGTTGAGCACCCTGTAACAGTTGAAAATCTCGAAAAAGGTTGCTTTATCATAGTGAAGTTTTGTTACAATGAAGGAACGAAAAAGGAATGTTTGAAGAAATTCGTCGCAGAAGTTattaatttgaacaaaaaatcatACACAGTGCATTGCCTGCGGCGATACAAGGAGACAAGAAATATTTTTGTGTACCCTAACATCGAAGATGAGAACATCATCACCTTTGGTCAGATCCAAGCGATTCTGACCAAaccgaaacaaaaaaggggATTGAGAATTTTCTGCAGCAATGTTGCATTGTGa
- Protein Sequence
- MPRLYRRQLGSRRYRDYDQNTLEQALTEVANGTLSLREAETRYNIPRATLNRKFRGLNPNAPGRQPVLNVREEKTIVKAILKAAEWGYPLTNTDIRDLVKRYLDRRGIREKRFKENLPGYDWIQSFLKRQGDLTTRMAQNIKRSRSEVTAVEINEYFDHLEQSLQDVDPENLLNYDETNLTDDPGQSKVVVRRGVKRAFRVMDHSKASTSVMFSVSASGETLPPYIVYKAKNLYPEWMEDGPNHCVYNRSKTGWFDGNIFEDWFYKVAIPYFRNRPGKKAMIGDNLAAHLSTQFPALLKQALADLQVNAEKNIQSGFRATGIFPINRLEVLKRLPGYNNEPEANDEMSTAFEELIKKHVAVTTSVEPMKKRKKMNIKPGESVSVNSLNASLDNSNLSEDNDAPAEDQEEDEELHQEPTEEEENSDYLDEAVEMVEHPVTVENLEKGCFIIVKFCYNEGTKKECLKKFVAEVINLNKKSYTVHCLRRYKETRNIFVYPNIEDENIITFGQIQAILTKPKQKRGLRIFCSNVAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00078374; iTF_00078369; iTF_00078370; iTF_00078371; iTF_00078376; iTF_00078365; iTF_00078366; iTF_00078367; iTF_00078368;
- 90% Identity
- iTF_00078369; iTF_00078370; iTF_00078371; iTF_00078374; iTF_00078376; iTF_00078365; iTF_00078366; iTF_00078367; iTF_00078368;
- 80% Identity
- -