Amac006891.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421961.1:127284566-127286557[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-09 1.5e-06 29.0 0.1 6 40 2 35 1 39 0.87 2 2 5.9 3e+03 -0.7 0.0 25 36 652 663 651 663 0.89
Sequence Information
- Coding Sequence
- ATGAGAACTGCATTGGACCTCGTATCCCAAGGAATGAGCATTAGGAAAGCCGCGAGGGAGAGCAACTTACCTTACCCAACACTAAGGCGCTATGTCAAAAAGAAGAGAACAGCCGGACATGACAATATACCATTACTACCGAACTATGAGGTGAACAGGATATTCACAGAGCACCAAGAAAATGTTCTCAAGGAATATTTGAAGAGATGTGCTCTCATGTTCTATGGACGGACAACAAAAGACACAAGAAAAGTCACATATGATATGGCTATCATTAATGATATCAAGATACCAGAATCCTGGAGGCGAGAAAAATTAGCTGGCAAAGAATGGCTTCGCAGTTTCAAACAAAGACATGCTGATCTCTCCCTAAGGAAACCTGAACCTACTAGCCTAGCTCGGGCTACTTCGTTCAATAAAGAAAAtgtcaagaatttttttgacaacctTGAAAACGTGATACATCGCAGTCCTGGATTCGCAGATGGGACCCGCGTTTTTAACTTGGATGAGACTGCGACAACAACTGTCCAAAAACCACAACGAGTAATGGCCCCTAAGGGCAGAAAATGCGAAGGTAAGGTAACAAGTGGTGAAAAGGGCACCTTAGTAACTACTTGTTGCATTATCGCTGCCAATGGAGTAGCTTTACCACCGGCTATGATCTTTCCCAGAAAGAATTTCAAGGATCACATGATGAAAGGTGCCCCACCTGGATCTTTGGGGCTGGCTGCGCCAACCGGATGGATGAATTCCGAACTTTTCGTAGAAGTGATGAAGCATTTTGTCAAGCACAGCAACAGTTCTAAAGAAAATCCATCTTTACTTATTTTCGACAACCATGAGTCGCACCTTTCAATTGAAGCTTTGAATTTGGCCAAAAATTCTGGCGTAACAATACTTACGTTACACCCGCACACATCTGGTAAACTGCAGCCGCTTGATGTGGGAGTATTTGCGCCTTTCAAGACATGTTACAATAGTGCAGTGGACTCTTGGCTTCTAAGGAATCCCGGACGGCCTGTAACCATTTATGAGTTGGCCGAATGCATTGGAATTGCCCATAGCCGTGCCATGACCCCAACTAATATCATGAATGCTTTCAAAGCATGTGGGATTTTCCCCTTTGATCGCGACATTTTTACCGACATCGATTTTTTACCAAGCGAAGTTACAAATCGACCCTGTCCTGATGAGGTACACCATGAAGAAACAGCAATGCCAGACCAGGCAGATGTAAGTGCGGGACCTTCCAATATTTGCAATGAAATCGAAATCGTAACAGACCTTGAAGACGAAGGCAGTGATCTTGAAGCAGGTCCCTCTTCGGAGCAATCAGTTAGAACAGGTCCCTCCCCACAGCACTTCGTTTCGCCAGAAGATTTCAGGCCCCCACTGCGGGCAGGACCACGAAAAAATGCGAGGAAGCcaagaaaaactggaaaaagcaTGATTGCGACCGATACTCCCGAAATGAATATaatcgaagaagaaaaaatgaggATTAAACGCAAGAAAGAAATTGTTAAGAAGAAGACAGTCAAACGCCGAGTTTTTCAGGAAGAAGATAGTGACGCAGAATCAACTGCCAGTTATTCTAACCATTCAACTGATGGTGGAGCTTGGAATGAGATGGATGATGATCCCGGTGATCCTATACTACTCACTCGCGAATCATTTCAACCCTTGACTCGAAGACCTACGGAAGGAGAATATGTCTTGGTGGAATTCGCAACGAAAAAACAACTTGTCCATTACGTTGGAAAAGTTGTGGAGTGTAAAAATGAGCCCGAAGAGTATTACATCAGTTTTTTGCGGATCAAGTCTAAAGCTAATGAGCAATTCTATTTGCCATTGAATCAAAATAAGTCTTTTGTCAAAGGGGATGACATAAAATGCATTCTTCCAAAACCCCAATTGAATGGTGGTACGATGAGACAACAATCATATTGTAAATTTGACGTGTCTTTTAGTGCATTACAAATGCGTTAA
- Protein Sequence
- MRTALDLVSQGMSIRKAARESNLPYPTLRRYVKKKRTAGHDNIPLLPNYEVNRIFTEHQENVLKEYLKRCALMFYGRTTKDTRKVTYDMAIINDIKIPESWRREKLAGKEWLRSFKQRHADLSLRKPEPTSLARATSFNKENVKNFFDNLENVIHRSPGFADGTRVFNLDETATTTVQKPQRVMAPKGRKCEGKVTSGEKGTLVTTCCIIAANGVALPPAMIFPRKNFKDHMMKGAPPGSLGLAAPTGWMNSELFVEVMKHFVKHSNSSKENPSLLIFDNHESHLSIEALNLAKNSGVTILTLHPHTSGKLQPLDVGVFAPFKTCYNSAVDSWLLRNPGRPVTIYELAECIGIAHSRAMTPTNIMNAFKACGIFPFDRDIFTDIDFLPSEVTNRPCPDEVHHEETAMPDQADVSAGPSNICNEIEIVTDLEDEGSDLEAGPSSEQSVRTGPSPQHFVSPEDFRPPLRAGPRKNARKPRKTGKSMIATDTPEMNIIEEEKMRIKRKKEIVKKKTVKRRVFQEEDSDAESTASYSNHSTDGGAWNEMDDDPGDPILLTRESFQPLTRRPTEGEYVLVEFATKKQLVHYVGKVVECKNEPEEYYISFLRIKSKANEQFYLPLNQNKSFVKGDDIKCILPKPQLNGGTMRQQSYCKFDVSFSALQMR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00078337;
- 90% Identity
- iTF_00078337;
- 80% Identity
- -