Amac004397.2
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- JRK
- Assembly
- GCA_949128115.1
- Location
- OX421961.1:75797331-75799168[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-11 3.3e-08 34.3 0.1 3 40 17 55 15 57 0.89
Sequence Information
- Coding Sequence
- ATGGTTTATAACTACAAAAAGAAGACTAACCGACAGAGCTGGTCAGCAGAAGGAATGGAACAAGCTGTTCAGGCAGTTATAAGTCGCGAAATGGGATATCGCAGAGCTTCAATACAGTTCAATGTTCCACAAACAACATTAGAACGATATGTTAAGAAACGCAGGGAAGATCCAGCAGGAGCGGTAACAAAAATTATGGGGAGTAAGAAGCCCATCTTCACTTGTGAACAAGAGATAGAGCTAGTTGAATATTTAAAAACAATGGAAGGAAGACTCTTCGGACTAACCATGAATGAATGCAGAGAACTTGCATTTCAATTGGCGGAACAAAATAATATCGACCATCCATTCAACAAGATTGAAAGATCTGCTGGAAAAGGGTGGATGCATGGTTTTCTATCACGTCATCCACAATTATCAATCAGAAAACCGGAAGCCACTTCAGGGGCACGTGCTATGGGTTTCAATAAAGTTGCTGTCTCTCAGTTTTTCAAACTGCTGACCGGAattgttgataaatataaactCACAGCCGAGAAGATATATAACGTGGATGAGACTGGAGTCACTGTTAATTCCAAAGGTTTGTCTAAAATATTGGCAACCAAAGGGAAGCGTCAAGTTGGAGCTGTTACATCCGCTGAAAGAGGCGAAACTGTAACGGCAGAGATATGCTTTTCTGCTGCAGGCTCGTATATGCCACCAATGTTGATATTCCCGAGAAAGCGGATGCAACAGGGATTCTTGGAGGGGCTAGTGCCTGGTGGGACAGTTGAGTTGAACGAGAAAGGATGGATAGATAAAAAGATATTTCTCAGCTGGTTCAAAAATTTTGTATCTTTCTCACATGCATCCAAGGAGACTCCTAGACCACGGTGTCATTCTCCTGTGCTTCCCACCCCATTGCACTCATCGCCTACAAGCTCTGGATGTTTCCTTTATGAAACCGTTGTATTTTACGATGACGAGGTCAGGAAATGGCTTAGATCTAACCCAGGACGCGTGGCAACTTTGCAGCAGATTGCCTCTCTTTTCAGCGCTGCATATCTGAGAGCTGCTACAATGCCTACAGCTATCAACGGATTCAGAAAGACTGGCGTTTGGCCAGTTGATGAAAATGTGTTTTCCGACAGTGACTTTTTACCATCTGACACTACAGATATAGTCTTGGCAACAGAACCTTTGGAACAACAAGCTACCGAATTATCTGAATCACGTGCTGGCACTTCCAGCGATTCCACTGATGCAATACATCATGATGAAGAGTCCGTGAGAGAAACTACCccaaaaaatgatgaaatgaATAATAACACCGACATCAATGCTTCATCAACCAACAGCAATTCAGATAAAACGGATGGTTGCACCAACTTCAAAttcaaaagtcctcaagaacTAATACCAGTTCCAAAAGTTAGTGGGAGTACGAAACGTGTGTCCAGAAAGAGAGGGAGAACAACTATCTTGACTGATTCGCCATACAAAAATGAACTTGAAGAAGCTGAAAGCAAAAAGAATACACCAAAACGGAAACCGCGTCCAGTGAAAAGGAGAGTTGAGCTTCAGGAAGATGATGACGACGAAGAGCCAGAAATAAATTTGACCGAAGATGAGGACGACGATCCCGCTTGCATTTATTGCAATTCGCTGTATTCGCTCTCCAAATCCAGAGAGATCTGGATAAGATGTCAAAATTGCCGCAGATGGTGCCATGCTGAATGTGCTGATGTCGACAAGAAGATAAAGTTGTTCATCTATGAAATTTGTGGATAA
- Protein Sequence
- MVYNYKKKTNRQSWSAEGMEQAVQAVISREMGYRRASIQFNVPQTTLERYVKKRREDPAGAVTKIMGSKKPIFTCEQEIELVEYLKTMEGRLFGLTMNECRELAFQLAEQNNIDHPFNKIERSAGKGWMHGFLSRHPQLSIRKPEATSGARAMGFNKVAVSQFFKLLTGIVDKYKLTAEKIYNVDETGVTVNSKGLSKILATKGKRQVGAVTSAERGETVTAEICFSAAGSYMPPMLIFPRKRMQQGFLEGLVPGGTVELNEKGWIDKKIFLSWFKNFVSFSHASKETPRPRCHSPVLPTPLHSSPTSSGCFLYETVVFYDDEVRKWLRSNPGRVATLQQIASLFSAAYLRAATMPTAINGFRKTGVWPVDENVFSDSDFLPSDTTDIVLATEPLEQQATELSESRAGTSSDSTDAIHHDEESVRETTPKNDEMNNNTDINASSTNSNSDKTDGCTNFKFKSPQELIPVPKVSGSTKRVSRKRGRTTILTDSPYKNELEEAESKKNTPKRKPRPVKRRVELQEDDDDEEPEINLTEDEDDDPACIYCNSLYSLSKSREIWIRCQNCRRWCHAECADVDKKIKLFIYEICG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00078322; iTF_00078323; iTF_00078324; iTF_00078325; iTF_00078326;
- 90% Identity
- iTF_00078322; iTF_00078323; iTF_00078324; iTF_00078325; iTF_00078326;
- 80% Identity
- -