Amac018578.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421963.1:91943169-91957794[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.7e-11 2.4e-08 34.8 0.0 1 39 337 376 337 380 0.90 2 4 1.6e-12 8.2e-10 39.5 0.1 1 39 391 429 391 432 0.95 3 4 2.1e-18 1e-15 58.3 0.0 1 45 446 491 446 491 0.98 4 4 6.2e-16 3.2e-13 50.4 0.0 1 39 498 537 498 540 0.94
Sequence Information
- Coding Sequence
- ATGCcgcgatcaatgtggaattCGGAGtcTCTGTTACGGACGGCGGATCAGCTGAAAATCAAAGGACTGTGCGAGCCATCCGACGAAAAAGAGAACACCACTCCGCAGCTGTTCGCCAAGAACCTGAGCAACAAGTTACGTAACAAATCGTCCCTGTCGCCCGGGCACCATCAGATATTCAGCAAAATCATACAAAACCAAGACAATAACGGTGCCACTTCTCCGACGACCAGAAGGACCAGGCAGCACCATCACAAGTACAAGAAACGTCAGCTGTTGGAGGAGAGCAACGGCGAAGAAGAAGGCGATAAAGAGGACGGAGAAATTGAAGGAAGGGCATCGGGAGGAGTAGGAAGGGGGAGTCCATTGGAGAACTGTTCGTCGGACGAAGAAAATGATATGCCAGTGGTAGTAGCGGGCTCAAATGATCACAAGAGGAAGAGGGTGGAACAACATCATCATCAGCTGGAGCAATTAAAGCCACTCAACATGAGCAATCATGGAACTATGACGGGACAGACAATCTTCTCTCAGTTCGGAGTAGACCAGGATGACTTTCCGCCGGAACCGCCGGCTCCCTCGGCCATTCCCGTGGGACACGTCGAGATGCAGGACCACTCGCCCACCCGCACCCTCCTCACCAATTCGACCTCGATCCACCGCACGGACATATCCGACTCCAAATACACCACCAGCAGCACCAACGCAACGACCGCTGCGACGGACATCAAAAAGGAATCCGACATCAAGTTCGAAACGCTGCGTTCGTACGACCAGGACAGCCTGCTGGAAATGGACTCGCACATGTCCGGCCACTCGATGGACAGCCACGACGACGACCAAAGCATGCACCAAATGATGGTCACGCCCGAGCTCATGGGCATGATGCCCGGAGTTTCGAACCGATTAGATTTAAGTAGTAACGAAGTACCTGCATTAAAAAACAACGGCCACACCGACGGCATCCACCACACGCCGAGGTCGCACGGTGGCGGGCCGAAAACTTGGACTCAGGAAGACATGGACATGGCCTTGGATGCGTTAAGGAACCACAACATGAGCCTAACTAAAGCGTCGGCGACCTACGGCATTCCCTCCACTACCCTATGGCAGCGGGCGCACCGGCTGGGCATAGACACGCCAAAGAAGGAAGGACCGACCAAGTCGTGGACGGAAGAGAACCTCAACAGTGCGCTAGAAGCGCTGAGGACCGGGACGATATCGGCCAACAAGGCCAGCAAAGCTTACGGAATACCGAGCAGCACTTTGTACAAAATAGCCAGGAGAGAAGGTATACGATTGGCCGCGCCGTTCAACGCCGCCCCCACGACGTGGACGCCCGAAGACCTGGAAAAAGCCCTGGAATCCATCCGATCCGGCCAGACGAGCGTGCAAAAAGCCTCGACCGAATTCGGCATACCCACCGGGACGCTGTACGGAAGGTGTAAACGGGAAGGCATAGAACTGTCGAGGTCGAACCCAACCCCCTGGTCCGAGGACGCCATGGGCGAGGCCCTGGAAGCCGTCAGATTGGGTCACATGTCCATCAACCAGGCGGCCATCCACTACAACTTGCCCTATTCCTCTCTGTACGGCAGGTTCAAGCGGGGCATCAAGTACGATTCGGACAGCATAGAACCGAACTCCGACAGCCAGTCGCAGATGGACAGCCACGCTTTCGGCATGGAATACGCCAATTCCCACCCGCAGATCTACCAGAACCAGACGAACAGCTGA
- Protein Sequence
- MPRSMWNSESLLRTADQLKIKGLCEPSDEKENTTPQLFAKNLSNKLRNKSSLSPGHHQIFSKIIQNQDNNGATSPTTRRTRQHHHKYKKRQLLEESNGEEEGDKEDGEIEGRASGGVGRGSPLENCSSDEENDMPVVVAGSNDHKRKRVEQHHHQLEQLKPLNMSNHGTMTGQTIFSQFGVDQDDFPPEPPAPSAIPVGHVEMQDHSPTRTLLTNSTSIHRTDISDSKYTTSSTNATTAATDIKKESDIKFETLRSYDQDSLLEMDSHMSGHSMDSHDDDQSMHQMMVTPELMGMMPGVSNRLDLSSNEVPALKNNGHTDGIHHTPRSHGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSDSIEPNSDSQSQMDSHAFGMEYANSHPQIYQNQTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -