Basic Information

Gene Symbol
ct
Assembly
GCA_949128115.1
Location
OX421967.1:9790751-9885250[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.1e-27 4.4e-23 82.3 0.0 2 72 519 590 518 595 0.95
2 3 1.9e-32 2.8e-28 99.0 0.0 2 77 925 1001 924 1003 0.96
3 3 2.1e-30 3e-26 92.4 0.0 3 75 1147 1220 1145 1224 0.95

Sequence Information

Coding Sequence
ATGCAGCCGTCTTCGGCGGCGGTTACGTCCGTGCCGCCTCCGCAAGCATCACAGCCGCCTACGAGTGTCGGTGCCGGTGGTGTTGTCGGTGGTGGTGGCGGCTTGAACGCGGTTGATATGGACCTGCAGACGGTGCAATCCATGGACTGGCTGTTCAAGAAGGAGCGGTTTTACTTGCTGGTGCAGTTCTGGCAGCAGAGAGCAACGCTGGCCGAAAAGGAAGTGACGACCCTCAAGGAACAGATCGCCAACAACACAACGAACAACTGCGAAGCGAAAGACGGCAACTGCGGCAACAACATGGACAGGCAAACTTTCGAAAACGAAATCGCAGCCAAAGATATCGAAATCAAGCAATTGTCCGAGGAAGTACAAAGATTGCAGAGCACAGTGTCGAAGCTGAAGGAGTCGTCGATAGCGCAGATATCGAGGTTGGAGGACCAGCTGGAGCAGAAGAGGCAGCACGTGGCCAGGTTGGAGGCCAAGTTGGACTTGCAGAGGGATTACGAAGACTTAAAACGGGAGTTGAGCATCCTCAGATCGGAACTGTCGAACAATCCCGATGCCAAATCCATCGAGCTTCTCttagaaaaaaccaaaaacttcCATCACCATCACCAAAGCAGCCAACACGGAGACAAGACCCCAACGCAAGAGGTCGAAGGTTGCCTTCGACCTTCGGAAGCGCCTCCTCAACCTACCTCCGCACTTCCATCAACACCAACACCAGACCCTCCGACCCCCCCGCTGCCGCCCCCCTTCCAGAACGTAGAGACCTTCGGTAGCATGCTAGGCGAAGAGATCGTGGCCAGCTGGAGGCGCAATTTGGGCCAGCAATTCGCGCAGTTTAACCCCGAAAACCACCCGGCTTTCCTccagcaccaccaccaccagcaacagcaacaacaacaacagcaacaacaacagcagcagcagcagcagcagcagcagcaacaacaacaacaacaacagcaacagaaAATTCTAATCCCCCCTTGTCCTCCCGTTGTAGCCGCAGACGTCAAACCGCCGCTGACGCCTTCCGATGGTGGAATCTGCGAACGGACGACGCCGGCTTCCACACCGCAGCCTTCTTCCATCCGGCTGGAGCAGGACAACAGCCAGTCGCAGCCGGCGCTgttccagcagcagcagcaacagcagcagcagcaccaaCAGCAGCCGATTCACCAGCAGCCAAGGTCTTCCCCGGCGTCGCTCAAGGGCAGCAGCGAGAGTCTGCCCAACGGCAACCCGAAGAGTCCGGAGGACAACAACAACCACCACGTGatcagcaacaacaacaacagcatgTCCAACATGGCGACCATGTGCGCGGTCAACAACTTCTTGCGGGGCGGGTCGAGCGAGGACTCGCTCAAGAGCCCGTACCGGTTCGAGGATCACCACCGGTCGCCCTTCAGGTTCGCCGAGGAGCTGGGGATGGCGCCCGGGTCGATGGTCGGCCGGCTGGGGGAGAGCCTGATACCGAAGGGCGATCCGATGGAGGCCAAGCTGCAGGAAATGCTCAGGTACAACATGGACAAGTACGCCTCGCAGAACCTCGACACGCTCCACATTTCGCGGCGGGTGCGCGAGCTGCTGTCCATCCACAACATCGGCCAAAGACTGTTCGCCAAGTACATCCTTGGCCTATCACAGGGCACCGTTTCCGAGCTGCTGTCCAAGCCCAAGCCCTGGGACAAGCTGACTGAAAAGGGCCGCGACAGCTACCGCAAGATGCACGCGTGGGCCTGCGACGAACAGGCCATACTGCTCCTCAAATCGCTCATACCAAAGAAAGACAATTTTTCCTCAGGCAAAGACACTGGCATGCCGACGTTCGGCCGGCCCGAAAACGACCTCACCGAAGAGCGCATCGCGCACATCCTGAGCGAAGCCAGCCAGTTCCAGCAGCTCAAGCAGGTCAACAACCAGAACCAGTTACCCAACCAGCCGCCGCCGCAGCCGCCCAGCAGCATCACCAGCCAGCCGATCGAAGACAGCCGGAGCAACGACGACTCCAAGTCGCCGCACGGCCAGTGTCTCAGTCCCTTTTCCAAAGACTCTTCGCAGAACCGGCGGCTGAAAAAGTACGAAAACGACGACATACCGCAAGAAAAAGTCGTCCGGATCTACCAGGAGGAGCTGGCCAAGCTGATGGGGCGACGCATCGAAGATCTGCGGAACCCCCGAGAAGCGTTTCCCAGTGTGTTTTTCCCGCAACTGTTCGCCGGCGGTCAGATGGACCGAACGCAGGAAGAGATTCGAATGGCTCTGGACGCGTACCATCGAGAAATCCTCAAGCTGAACCAAACTGGTGGCGGTGGACCGAACCAGATGCCGTTGGGTCTGCTGGCGCTGCAACAGCAAGCGCTTCAGCACCACCTAAGCGGCGCTCCAAACGGAGGCGTTCAAGACTTGTCGCTTccgaaagaaaagaaaatggtCAACGGAATCGACGACAAAGACAAAGACGACGACGCGCTGCGGCATAGCGGAAGCGCGTTCAGTTTAGTGAGACCCAAGCTGGAGCCCGGAGCGCAATCCGGCGGATCTACCGCCTCGAGTCCGCTAGGTAACGCCATCTTGCCTCCCGCTATGACCCCAAACGAAGACTTCAACACGGCAGCCGTTGCCAGTCCCCTGCAAAGGATGGCATCGATTACCAATTCGCTCATATCGCAACCTCCCAGTCAACCGCACCATTCGTCTAGCCAGCGACCCCTTAAAGCCGTATTACCGCCAATCACCCAGCAGCAGTTCGATCAGTACAACAACCTGAACACCGAGGACATCGTGAAGAAAGTCAAAGAGCAGCTGAGCCAGTATTCCATAAGCCAAAGACTGTTCGGCGAGTCCGTTTTAGGACTGAGCCAGGGTTCCGTCAGCGATCTGCTGGCGAGGCCGAAGCCTTGGCACATGCTGACGCAGAAAGGCCGCGAGCCCTTCATCCGCATGAAGATGTTCTTGGAAGACGACAACGCCGTTCACAAACTCGTCGCGAGCCAGTACAAAATCGCCCCCGAGAAGCTGATGCGGACCGGCGGCTATGGCGGTGCGGGCGCCCCCATAGGGAAGCCGCTGCCGCCGACGCCGAAGATGCTGAGCGACGCCGCCGCCGGCTTGATCAACAAGATGCAGCAGGAGACGCAGAGCCTGCTGCCGCCGTCGCTGCAGCTGGGTCCGCCGCCTCCCGGACCGGGAGCGCAGGGTCCCCCAGGTCCCGGGGTTCCTCCCGGGTCGATGCTGCTTACGCCGCCCGGAGTTCCGCCACACCACGCCATCAGCCTGCACACGCCCGACCACCTGAAGAAGTCGCAGAACCCCAGTCCTCACGGCGGCGTGCCCCATTCGCCCATGACCCCGCATCAGGTATCCTTGCGAAACATGCACCAACACATGTCGCCAAGCGTCTACGAAATGGCAGCCCTGACGCAAGATCTCGACACCCAAATTATCACCACCAAGATCAAAGAGGCCCTGCTGGCCAACAACATCGGACAAAAGATCTTTGGAGAAGCCGTGCTGGGCCTCAGCCAGGGCTCGGTGAGCGAGCTGCTGTCGAAACCGAAGCCGTGGCACATGCTGAGCATCAAGGGCCGAGAGCCGTTCATCAGGATGCAGCTGTGGCTCAACGACGCGCACAACATCGACCGTCTGCAGGCGCTGAAGAACGAAAGGCGAGAAGCGAACAAGCGACGTCGGTCTTCCGGCGGTCCCGGCGCACACGACAACTCTTCCGACACCTCTTCCAACGACACCTCCGAGTTCTACCATTCGAATTCGCCCGGACCCGGCCCCACCTCGGCCAAGAAACAGCGCGTTCTCTTCTCGGAAGAGCAGAAAGAAGCGTTGCGCTTGGCCTTCGCCCTGGATCCGTACCCGAACGTCGCGACGATAGAGTTCTTGGCCACGGAACTCGGGCTGAGCTCTCGGACGATCACCAACTGGTTCCACAACCACCGGATGCGGTTGAAGCAGCAGGTTCCGCACGGCATGGTTTCGGATATACCACCCCGCGATCAGACAGGAAGTCAAGGTCCGTTCGACCCGGTCCAGTTCAGGTTGCTGTTGAACCAAAGACTGCTGGAGCTGTCCAAAGAGCGGATGGGGTTGAGCGGAGTTCCGCTGCCGTACCCTCCGTACTTGGCCGCCAACACGAACTTGGCCGCGCTGATCTCGCGAGGTCTCTTGCCCACTGCCGACATGGATCTGAGCGCGTTGAACAACGCAGTCAAAGAAGAAATGAGCGGCTTGGACTTGTCGATGGGATCGTCGATGAAACGCGAACCGGGCGAttacgacgacgacgacgtcgAGTCGAACGCCTGTTCGGAAGACTCGATGTCGGAAGGTTCGGAACCCAAGCCGAAAGTCGATCCGTCGCCGGTGTCTTCGCAGAGCGGCGGGCGAAGTTCAAGACGAAAACCCGCGGCGCCCCAGTGGGTCAACCCCGACTGGCAGGAGGAGAAGCCGGGCGAAAAGACGGCGGCAGGTGACGAGGTCATAATCAACGGAGTCTGCGTGATGCAAACCGAAGATTACGGCCGGAGATCGTCGGAAGAGACGGTCCGCGTCGAACCGACGCCCGTGATGGATCGCTTCGAGGAATCCGACGCCGCCTCTTCGATAAGCGACGAACCCCAAGAGCCTTCGGAAGAACCCGAAGAACCCAAAGAAGAACCCGTGCAAGACGAAGACACGGACAAGTCCAAGAAAGAAAACGAAGACGAGCGATGGGACTATTAG
Protein Sequence
MQPSSAAVTSVPPPQASQPPTSVGAGGVVGGGGGLNAVDMDLQTVQSMDWLFKKERFYLLVQFWQQRATLAEKEVTTLKEQIANNTTNNCEAKDGNCGNNMDRQTFENEIAAKDIEIKQLSEEVQRLQSTVSKLKESSIAQISRLEDQLEQKRQHVARLEAKLDLQRDYEDLKRELSILRSELSNNPDAKSIELLLEKTKNFHHHHQSSQHGDKTPTQEVEGCLRPSEAPPQPTSALPSTPTPDPPTPPLPPPFQNVETFGSMLGEEIVASWRRNLGQQFAQFNPENHPAFLQHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKILIPPCPPVVAADVKPPLTPSDGGICERTTPASTPQPSSIRLEQDNSQSQPALFQQQQQQQQQHQQQPIHQQPRSSPASLKGSSESLPNGNPKSPEDNNNHHVISNNNNSMSNMATMCAVNNFLRGGSSEDSLKSPYRFEDHHRSPFRFAEELGMAPGSMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEQAILLLKSLIPKKDNFSSGKDTGMPTFGRPENDLTEERIAHILSEASQFQQLKQVNNQNQLPNQPPPQPPSSITSQPIEDSRSNDDSKSPHGQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRIEDLRNPREAFPSVFFPQLFAGGQMDRTQEEIRMALDAYHREILKLNQTGGGGPNQMPLGLLALQQQALQHHLSGAPNGGVQDLSLPKEKKMVNGIDDKDKDDDALRHSGSAFSLVRPKLEPGAQSGGSTASSPLGNAILPPAMTPNEDFNTAAVASPLQRMASITNSLISQPPSQPHHSSSQRPLKAVLPPITQQQFDQYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGAGAPIGKPLPPTPKMLSDAAAGLINKMQQETQSLLPPSLQLGPPPPGPGAQGPPGPGVPPGSMLLTPPGVPPHHAISLHTPDHLKKSQNPSPHGGVPHSPMTPHQVSLRNMHQHMSPSVYEMAALTQDLDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGGPGAHDNSSDTSSNDTSEFYHSNSPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLATELGLSSRTITNWFHNHRMRLKQQVPHGMVSDIPPRDQTGSQGPFDPVQFRLLLNQRLLELSKERMGLSGVPLPYPPYLAANTNLAALISRGLLPTADMDLSALNNAVKEEMSGLDLSMGSSMKREPGDYDDDDVESNACSEDSMSEGSEPKPKVDPSPVSSQSGGRSSRRKPAAPQWVNPDWQEEKPGEKTAAGDEVIINGVCVMQTEDYGRRSSEETVRVEPTPVMDRFEESDAASSISDEPQEPSEEPEEPKEEPVQDEDTDKSKKENEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00078276;
90% Identity
iTF_00078276;
80% Identity
iTF_00078276;