Basic Information

Gene Symbol
Jarid2
Assembly
GCA_949128115.1
Location
OX421963.1:2427162-2477983[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 10 4.3e+04 -3.8 0.1 8 43 430 467 425 498 0.57
2 2 9e-22 3.9e-18 66.8 0.0 6 89 2004 2085 2000 2085 0.93

Sequence Information

Coding Sequence
ATGAAGAGGAAACGCAAAGATGACGCCTCGGCCCTCATCCTGGACTACAGTCCGAAACGGACCAAGGTGCATGCCCAGCGCAAGTTCGCGCAGGGCTCCAACGTCAACAGCCCCGTCATGACGCCGGTGAAGGAGATCGAAAGGCAGGAGATGGACGTCATGCCGGAGCCGGTGGAGCTGCTGCCGATCAAGCGGCCCAACACCGAGGACTTCCTGACGTTCCTGTGCTTTCGCGGCACGCCGATCCTGCCGCcgagcctgaactttttcaaCACGGCCTCCATCGTCGACACCAACGGGCAGGTGCACGAGATCAAGAGCGAGTCGCCGAAGAACGGTCCGATCGACACGTGCGCCATCACCAAGACCGGCTGCGGTAGCTCGGAACGGCCGTTTGTGGCGTTCGGCGTGCGGAAACGCGCCGACCCCATCGTCATCAGCCGGCAGATGGACAGGAAACGGAGACATGCCCTGGCGCTGCAAGCTTTGCGACGGAAGTACCAGGAACAGCGCATGGCCAAAATCCGGGCGGTCACCATCAGCAAGCTGTCGGAAAAAGTAACAAACAGGGTCCTGGTGCGGACCAACACCGTGAAGACTGAAACCATCACCAAGAAAACCAACGTGCTGAACAAAACGAAAGTGGTGGCTACCAAGCACGTCAAGGTCACCAGCACGCAAACGGTCAAGACGCTGAGGCCCCCGAACGTCAAGCCGAAAATGTGCTTGAGGAGCTTCAGGGGGCGATTCGTGCAAAGGGAATTGCAATCCAGGAAGAATGCGGTGGCGGCGAAAAAGCTGAAGCCCATCAAAACTGTCGTCACTGCAGCCGCAAGAAAGGGGCAAGCAAGAGGCGTGAAGAAACAAGCGGTGGTGGCTGCAACAAAATCGGAAGATTCTTCTTCAGAAATGGAGGAAGAGGAAGACGAAGAAGAGGAGGAGGAAGAGGAAGAAGACGACGATGACAAGCCACTTTTGAAAACCACGCTGAAGCCCAAAGCCAAGGTCGTAGCGGCGAAAACCGCGAGGAAAACCGGAGCTGTCGGGCCCAAGAAACCCAGCGAAGTGAAAATAACTCGCTCGAACAAGTTCCCACACAACACGAAGATGACATCGAGACGTCAACAAATCAAGCAGCGCATGATCCTGACCGCTCCCAATACGATCGTCAAGCCGAGAAGAACTCTTCGTTCGCAAACCACCGCCCAAAAACCCGACGGCAAAAGCAAACAGTCGGAAGCGAGGTTCAAAACTGCCGTCGGCAAAAAAGACCAACGGCATcaccagcagcagcaacaacaccATTCTCAAGATAAAACCAAAAAAGAACCGTTACCGGGAAAAAAACATGTACCGCCGAAAAAGGACTTTgtgccgttgaaaaaaaccgcGAACAAAGCCACCGGTACCGGTACGACCACTACGAAAAAAGAAACGACCAAAACGACGGAAATCATGAAGAAGGTCCTGAACAAGACGATAGAGACGTCGAAGAACATGGTGGCCAAGATGCCCAAGCCGGTGGTCGCTCTGAGGAAGACCACGATCAGCGTGATCGAGCATCTGAAAAAGAAGGAGCTGGAACGGATCAAGCTGGACATAAGAAAAGCGCCGCCTTTCGCTTCGAGCTCGAAAGCCGAAGAAGTCAAAATGAAGAAAGGGAAGCACAAAGAAGCGACGCCCAAAGCGGCTGCTTCCAGATCCAGAGACGCTGCCGTCAAGGTCGGCGTGTCTAGAGAGGCTACACCGAAGCTCAAAGACGGTACTCCTAAACTCAAAGACAGTACTCTTAAGCCTAAAGACGGCACTTCTCAGGTTAAAGACAGTACTCCGAAGTTGAAAGACGGTACTCCGAAGTTGAAAGACGGTACTCCCAAGCTTAAAGACGGTACTGCTAAGCTCAAAGACGGTACTCCTAAGCTGAAGGATGGAGTTCTTAAGCCGAAAGATGGCGGCGCCAAGCTCAAAGACGTCAAGTCGAGAGAGGTTGCGAAGGAGCCTGCGAAAAAGTCCGAAGAAGTCGTTCGAAAAGAAGAAGAACCGAGGACGTCGCGGCCGAGCCGGAAGACGAAAGAGGCGGCCGCGATTTACATGGAAATTCTGAGCCACAAGTTGGTGAACGAGAGCCGCATCGACGACGACAACGTGTCGATCGACAGTTTCCCCGAACTGCCCAACGTGAAGAAGACCGAGCAGCGGGAAAACGAGCTGAAAGCCCAGGCGGCTCAGGACACGAAGGACAGAGACCAGAAAAAGAAGAACCCTCAACAGCCGACGAACGTTCCGCCGAAAGAAGCGGCGGCCAAAAAGAAAGCGGATCCGAAGAAAATCGAAGAAATCAAGGAAGAAACGAAGAAGGGCGAGCAAGACAGCCGCGCTCTGAGATCAGGCGATAGGAAAGCCTCGACGAGCGAAGACAGATCGTTGAGCGAGAAGAAAGTCTCAAAGCACGATGACGACAAGAAGTCGAAGAGCTTCGTCGACAACAAAAAACTGAAGAGCAGCGAGGAAGATAGGGTAAAACCGAAAGAAAAGTCGAAGGCGGAAGAAGACAGGAAGGCGAAAGCCGACGAAGAAAAGAAGGCCAAGGCCGAGGAAGAGAAGAAGGTCAGGGCTGAGGAGGAGAAGTTGAAGGCTGTTGAGAAAATGAAGGTTGCAGAGATGATTAAGGCCGAAGAAGAGAACCGGTCGAGAGCTGAAGAAGAGAAACGATCGAAAGCCGAAGAAGAGAAAAGGGCGAAAGCTGCTGAAGAACTAAGGGCCAAAGCCGAAGAAGAGAAAAGGGTGAAAGCTGCCGAAGAACTGAAAGCAAAAGTTGAAGAAGAGAAGAGGTTGAAAGCTAAAGAAATCAAGTTGAAAGCTGATGAACTCAGAGCAAAAGCCGAAGAAGAAAAAAGGGTGAAAGCTGAAGAAGAGAAGAGGCGGAAAGCTGAAGAAATGAAAGCGAAAGCCGAAGAAGAGAGGGTGAAAGCTGAGGCCGAGAAGAAAGCGAAAGCTGAGGCAGAGAAGAAAGCTAAAGTTGAAGCAGAAAAGAAGGCGAAAGCTGAAATGGAGAAGAAGGCGAAAGCTGAAGCAGAAAGAAAGGCGAAAGCTGAAGCAGACAGGGCGAAAGTTGAAGCAGAGAGGGCAAAAGCTGAAGCAGAGAAGAAGGCGAAAGCTGAAGCAGAAAGGAAGGCGAAAGCTGAAGCAGACAAGGCGAAAGTTGAAGCAGAGAAGAAAGCGAAAGTTGAAGCAGAGAAGAAAGCGAAAGCTGAAGCAGAGAAAAAAGCCGAAGAGGAGAAGAGATTGAAAGCCGAAGAAGAGAAGAAGGTGAAAGCTGAGATGGAGAAGAAAGCTAGAGAAGAGAGGAAGACTAAAGCTGAGGAAGCGAAGAAGGCCAAAGCTGAAGAAGCAAAGAAAGCTAAAGCCGAAGAAGAGAAGAAGGTCGAAGAAGAGAAACGGGCCAAGAACGAAGCGAAGAAAATGACGAAGGCAACAGACGCTTGTAAGAAGGGTAACATAAGTACAAAGACAAACGAAGCAGGCAAGAAAGTCGACAAAAATCCACATAACCAAGAAGGCGAAAGATCGAAAAAAGATGAAGGAATTACAGGCGCAATTGCCAAGAGCGGAGAGCTCACCGAAGATGCAGAGATGGTAAAAATCCGTTCTTGCTTCGAACACATCGAAGCGCAGCCCGTGACCAGCATCCAGATCCGACGGAAGACCGTCCACGGTGAGTCCCAAACGCCCACCAAGCGAAAGCCGGACGAACCCCTGGTCGAAATCGAAGCGAAGAAAGGCAAGAGCGACCACGaggaaaaaatcagaaagaAAATCAGACCGGAAACGGTCGTGAAAGCCGAAACTGCCGCCGAAGAAAGCAAAGATGCGGATTCGAAACAAGATAAAGGGGGCGGTGGCAGCACCGCAAAGTTAGCGATAAAAGACACTGCGAGCTGTTCCGAAGACGTGGTCAAAGACGAAGTGGATTTGGTTGCAGCGAAAAAGGTGCTCGATAAAGTTTCGAATAAAGGCGATGGTTCGAAAGGAACATGGGCGGGGAACCCTGGCAATGGTGGAGAAGATACCTCGGCAAAAACTGCAGAAAGAATCGAAGAAACGGCGAAGCAGCCGCCGGTTTTGGGAACGGTCGAGGAAGAACCCGGGGCGAGCGGCAGAGCAGCGGCGGGAGGCGACAGTCCGGTCAGAAGAAGAGCCGAAGAAACGGAAAAGAGGAAACTGAACACGAAACGAAGCAAGCTGGAAGACAAAAGGCAGACGCGCAATCCGTCCAGGGACGACGACGACTCCGACGAATCGTTCCACGTGGACGTGGTGGTGCCGCGCAGGAAACAGGCGACCAGAAGCAAGATCGTCAAGAGCTACGCCAGCGAGTACGACGACGACGATTCCGGCGATTCGCCGAAAACCGACGAGATAATCGAAGAAATCAAGAAAGCCCTGAAAAAAGACGCCGCCAAGAACGCGAAGGCGTCGACCGTCGCCAGAGAAATCGCCAGCAGAGAAACGGCCGCGGCCGCCGCGAAAGTAACGCGGCCCATCAAAGAAAGCTGTTCCGGCAGCGAACAGTCGAAAGCGAAGCCGCCGAAGAAGAAGCAGCTGACGAAAACCAGAAGCCTGGCGAAGATCATCGGCGGCAAGCAGCACCAGCACGACAACTTCAGCGATTCCGACGAAGAACCGCTGATCAAGCTGAAAGCGGAAGCGAAACCGAAACGGGAATGCGCAAGGCGTCCGCAAAATTACCTCCCCATGTTCTCTTCCAGCGAAGAAGACGACGAGCTGCTCTACCGCTTGGAAGAAGCGAAACTGGAAGCGAAAGACAAGGAAAAGAAGGCGGCCGTCAAGCCCGCAGCGGTGGTCGCACCGCTGCCGCCGGAGGAAACCTGGGATTTGTCGAGCAAAGACATCGGCAGGCGTTTCGGCAAGGGCAAGGTGAACATGTCCAACGAACAGATCGAAAAGTGGATCAAGGACTCGGCCATGGCCGGCTTCGGCAAGAGCGAAACCGACGAAATGCTCACCGACAAGATACCGACCGACACGTCGCTGGTCGCCGGCAGTTCCATCGACACGCTGAAACTGAAGAAATCGCTACTGGAAGAAAGCAAGGCCGCCGCCGCCGCGGCGGCGGTCGAATTGAAAGCAAAAACTGCAATCGAATTGGGTAGCGGCGGCAAAGACCAGAGGGCGCTGGTGGTGACGGCGGCGGTGAGTCCGAGCGAAAGGAAGATCTTCCGCAAAGAAAAGCAGTGCGTCTTTCCGAGCGCCAGCGCCTTCTCGCCCAACAACGAATCGAGCGTGTACGCTTTCGAGGAGCCGCACCACGAGGACGTGATGAAGACGCCGTTCCGGAGGCCGACGCGGCGTCCGTCCAGCACGGCCACGTCCAAGTCCGAGGACGAAAAGCCGGAGGAAACTAAAGGACAGTTCCGCAAGCCGACCTTGCTCCGGCAGGACTCGACCAAGTCCGCGGAAGAAGCCCCAGAAGACAAACCCGGCCCCAGCACCTCGAGCAAGCTCATGGAACCGCCCAGCAACACGCCGCAGAAGCCCTTCAGCAAAGACACCAAGGGCAAAGCCAGGAGCGACAGGCTGTCAGAAGCCTCCGAGGAATGCAAGTACAAAATACCGAGCAGTCCCAGCGCCTCCAGCTCGTCCAGCGCCAAGCTGTGCGCCGCCAACAAGCGCCAGAATCCGAAACAGATCAAGGGCGCCAGGGCCGCGGCCGCGGAAGTGACGCCCGTCAAGCTGAACGAGTTTCCGTGTTTCGGACAGGCGCAGCTGGTCGAAGCGCCGACGTTCCACCCGAGCGACAAGGAATTCCAGGATCCGATCGAATACATCGAGAAGATCCGGCCGCGGGCGGAGCAGTTCGGCATCTGCCGCATCGTCCCGCCGGCCACCTTCAAGCCGGAATGCAAGGTCACCGACGACATGCGGTTCACGGCGTACAACCAGTACGTACACAAGATGCTGCATCGCTGGGGGCCGAACTTCAAAGAGCTGATGGCCATCAAGAAGTACCTTTCGACGCAGAACATCAGCTTGACGCAGTCGCCTTGGATCGGCGGCATGGAAGTCGACCTGCCCAGGCTGTACCAGACGGTTCAGATGCTCGGCGGGCTGAAAGAAGTCATCGAAAAGAAGAAGTGGCCGAAAGTATCGGACGCCATGAAAATTCCGAAGTGCGCGCAAGATCGCGTCACCAAACTAGACGATATTTACTGCAAGTACCTCTTGCCGTACGACACGTTGTCTCCAGCGGAACGGGAGAAACTGTTCGACGAAGTCGAAACGGACTGGGCCAAGCGCGAGTCGAAGTCACTGCTGAAGGCGCAGCAGAACGTCGAAGCATCCGACAACGAGGAGGATTCCGAGGACGACAACGAGGCGGAAGAGTGCATAGTCAAGGGCAGGAACATGGCCCTGAACGCGTTCTACCGAATCGCCAGGAACACCATGAGCATGTGGTTCAGGAATCCGGAGCCGTCGGCCCAGGAGGTCGAACAGGAATTCTGGAAGCACGTCACCCAGAAGCAGAACCACATCTGCGTACATTCCGGATCCATCGATTCCGGCAGCTGGGGCTACGGCTTCGCCGTCTCCAAAAACAGCCCTTTCGCCCGGCACGCCTGGAACCTCAAGGTCCTCACCAACAATTCCGGTTCTGTTCTGAGATCGCTGGGACCGATGATGGGCGTGACGGTGCCGACCTTGCACGTCGGCATGGTGTTCAGCTCGTGCTGCTGGTACCGCGATCCGCACGGCCTGCCCTGGATCGAGTACCTCCACACGGGCGGCAACAAGATCTGGTACGGCATTCCGGATTCGACCAGCGCCTCGTTCCACGCCGCGCTGAAGCGAACGGTGCCGAACTACTGCCGCAACAAGACGATATGGCTGCCGTCGGACACGGTGATGGTGCCGCCGGCGTTGCTGGTGGAAAACGGCGTGAGCCTGAGCCGGGTGGCCCAGGAACCGGGCCAGTTCGTCGTCGTGTTTCCCAAGGTGTACACGTCCTGTCTGAGCACCGGCTACGTGGTGTCGGAAAGCGTGTACTTTGCGCCGCCGGCCTGGCTGCGCACCGCCAAGATCCTCTTCGACGAGCTGAGGGACAGCAGCGAACCGTCCATGTTCTCGCTGGAACGGCTGCTGCTGAGCATCGTCGGCGATCAGCGGTCGAACGTGGAAGTCTTGCGTAGGGTCGCGCCGGCCGTGCAAGCGCTCTGTGATATGGAAAAGGCGAATAGGGACAAGCTGAGGGCGCTGGGCGTGTGCGCTGAGGAGAAACTGCCGCTGCCCGAGGCGACGAGCGGCAAGAAGAAGCGCAAGCTGCTGCGCGAAGAAGACGGCGATTACGAATGCGAACTGTGCAGGATGAATTTGTTCGTTTCTATGATCACGGAATCGCAAGAAGACGGAGTCTACTGCCTGGACCACGCCGTCGAGCAAATCGAGAAGAACAAGATCCAATCCAAACACTGCAAGCTTCTGTACACGTACGACGTCACGGACCTGGACGGGCTCCAGGACAAAATCAAGACGGCGATCGAAAATAAATTGCAAAAgaaaattcccggaaaattcgcAGGCATGCCGACGTTACTCAACAAATGA
Protein Sequence
MKRKRKDDASALILDYSPKRTKVHAQRKFAQGSNVNSPVMTPVKEIERQEMDVMPEPVELLPIKRPNTEDFLTFLCFRGTPILPPSLNFFNTASIVDTNGQVHEIKSESPKNGPIDTCAITKTGCGSSERPFVAFGVRKRADPIVISRQMDRKRRHALALQALRRKYQEQRMAKIRAVTISKLSEKVTNRVLVRTNTVKTETITKKTNVLNKTKVVATKHVKVTSTQTVKTLRPPNVKPKMCLRSFRGRFVQRELQSRKNAVAAKKLKPIKTVVTAAARKGQARGVKKQAVVAATKSEDSSSEMEEEEDEEEEEEEEEDDDDKPLLKTTLKPKAKVVAAKTARKTGAVGPKKPSEVKITRSNKFPHNTKMTSRRQQIKQRMILTAPNTIVKPRRTLRSQTTAQKPDGKSKQSEARFKTAVGKKDQRHHQQQQQHHSQDKTKKEPLPGKKHVPPKKDFVPLKKTANKATGTGTTTTKKETTKTTEIMKKVLNKTIETSKNMVAKMPKPVVALRKTTISVIEHLKKKELERIKLDIRKAPPFASSSKAEEVKMKKGKHKEATPKAAASRSRDAAVKVGVSREATPKLKDGTPKLKDSTLKPKDGTSQVKDSTPKLKDGTPKLKDGTPKLKDGTAKLKDGTPKLKDGVLKPKDGGAKLKDVKSREVAKEPAKKSEEVVRKEEEPRTSRPSRKTKEAAAIYMEILSHKLVNESRIDDDNVSIDSFPELPNVKKTEQRENELKAQAAQDTKDRDQKKKNPQQPTNVPPKEAAAKKKADPKKIEEIKEETKKGEQDSRALRSGDRKASTSEDRSLSEKKVSKHDDDKKSKSFVDNKKLKSSEEDRVKPKEKSKAEEDRKAKADEEKKAKAEEEKKVRAEEEKLKAVEKMKVAEMIKAEEENRSRAEEEKRSKAEEEKRAKAAEELRAKAEEEKRVKAAEELKAKVEEEKRLKAKEIKLKADELRAKAEEEKRVKAEEEKRRKAEEMKAKAEEERVKAEAEKKAKAEAEKKAKVEAEKKAKAEMEKKAKAEAERKAKAEADRAKVEAERAKAEAEKKAKAEAERKAKAEADKAKVEAEKKAKVEAEKKAKAEAEKKAEEEKRLKAEEEKKVKAEMEKKAREERKTKAEEAKKAKAEEAKKAKAEEEKKVEEEKRAKNEAKKMTKATDACKKGNISTKTNEAGKKVDKNPHNQEGERSKKDEGITGAIAKSGELTEDAEMVKIRSCFEHIEAQPVTSIQIRRKTVHGESQTPTKRKPDEPLVEIEAKKGKSDHEEKIRKKIRPETVVKAETAAEESKDADSKQDKGGGGSTAKLAIKDTASCSEDVVKDEVDLVAAKKVLDKVSNKGDGSKGTWAGNPGNGGEDTSAKTAERIEETAKQPPVLGTVEEEPGASGRAAAGGDSPVRRRAEETEKRKLNTKRSKLEDKRQTRNPSRDDDDSDESFHVDVVVPRRKQATRSKIVKSYASEYDDDDSGDSPKTDEIIEEIKKALKKDAAKNAKASTVAREIASRETAAAAAKVTRPIKESCSGSEQSKAKPPKKKQLTKTRSLAKIIGGKQHQHDNFSDSDEEPLIKLKAEAKPKRECARRPQNYLPMFSSSEEDDELLYRLEEAKLEAKDKEKKAAVKPAAVVAPLPPEETWDLSSKDIGRRFGKGKVNMSNEQIEKWIKDSAMAGFGKSETDEMLTDKIPTDTSLVAGSSIDTLKLKKSLLEESKAAAAAAAVELKAKTAIELGSGGKDQRALVVTAAVSPSERKIFRKEKQCVFPSASAFSPNNESSVYAFEEPHHEDVMKTPFRRPTRRPSSTATSKSEDEKPEETKGQFRKPTLLRQDSTKSAEEAPEDKPGPSTSSKLMEPPSNTPQKPFSKDTKGKARSDRLSEASEECKYKIPSSPSASSSSSAKLCAANKRQNPKQIKGARAAAAEVTPVKLNEFPCFGQAQLVEAPTFHPSDKEFQDPIEYIEKIRPRAEQFGICRIVPPATFKPECKVTDDMRFTAYNQYVHKMLHRWGPNFKELMAIKKYLSTQNISLTQSPWIGGMEVDLPRLYQTVQMLGGLKEVIEKKKWPKVSDAMKIPKCAQDRVTKLDDIYCKYLLPYDTLSPAEREKLFDEVETDWAKRESKSLLKAQQNVEASDNEEDSEDDNEAEECIVKGRNMALNAFYRIARNTMSMWFRNPEPSAQEVEQEFWKHVTQKQNHICVHSGSIDSGSWGYGFAVSKNSPFARHAWNLKVLTNNSGSVLRSLGPMMGVTVPTLHVGMVFSSCCWYRDPHGLPWIEYLHTGGNKIWYGIPDSTSASFHAALKRTVPNYCRNKTIWLPSDTVMVPPALLVENGVSLSRVAQEPGQFVVVFPKVYTSCLSTGYVVSESVYFAPPAWLRTAKILFDELRDSSEPSMFSLERLLLSIVGDQRSNVEVLRRVAPAVQALCDMEKANRDKLRALGVCAEEKLPLPEATSGKKKRKLLREEDGDYECELCRMNLFVSMITESQEDGVYCLDHAVEQIEKNKIQSKHCKLLYTYDVTDLDGLQDKIKTAIENKLQKKIPGKFAGMPTLLNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-