Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949128115.1
Location
OX421966.1:19613095-19637035[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-24 2.3e-20 74.0 0.0 2 89 234 318 233 318 0.95
2 2 2.3 1e+04 -1.8 0.0 39 67 1205 1230 1168 1240 0.65

Sequence Information

Coding Sequence
ATGATGCCTAAATCATTTCTCAACAACTTGGATAAAATGATAAAATCAGCGGTGAAAGAAGTTCTTTGTATTCCGTCCGACACACCAGACCACCTGTTGTACTCACCTCGCACTCATAAAGGGCTAGGACTCATAAAAGCTTCTTGGGAAGCCTTCCTACAGAGGTTCAATATCTGCAAAACTTTGGAGAAATCCGATAACCAACTTGTTCCACGGATCATGAACCTAACAAACGAGAAACAAATATGTCTGAAAGCCCTGAATTTGACTGCTTCTGAAGATCTTGAAATTAGCACGGAAGATTCTTCTCTTAATTCTACGAAAATTAGGAAGATACTACGCCTGAGGGAATTCTCGCAGTGGTGTAAATTGCCCCACAAGGGCCGTGGAGTCATACTATTTGCAGAATACACACCGGCAAATTCCTGGATGTCAACCAGAAAGGGCCTGACGAGCTCCGAATACACCGAAGCAATTAAAATGAACGGGAACGTAACGGCATGCAGAGCCACCCCAGGACGAAGCCAAGACGGCAACCGATGTCGCCGCTGTAGTGTCGGCATTGAGAATAATGTAGCTTTTGAAACATTGCCGCACATTCTTGgtGATTGGTGCCCTCCGTTTGCTGTCAACGTCGACAAACTGTCTTTCATACCAAGAGTTCAAAGACTAAACGAATTAGACGCGGGTACGAGGGTCAAACTCAATTTTCTCGACCAAATAGCGAAATTTTGGGAACTTCAAGGATCGACTCTGAAGATCCCGACAGTGGAGAGACGTAGCATAGATTTATACGTTTTGCACAACATAGTCCGCAGTCACGGTGGCTTTAAACAAGTGACGTACGACAGGAAGTGGTCCAGGGTAGCCATCGACATGGGCTACACACCCGGCAAAGGTACTATAGGGTTTATACTCAAAGGACACTACGAAAGGCTGTTGTACCCTTATGATCTCTTTAAAGCGGGGAAAACTCTAAGCCCGCAAAAAGGCGAAGACATGCTCCAAGCGGAAACCATGGACCAGTCATCGATCGACACGAAAGTGATCGATAAAAGCTACACGCCCCATGAAATTGTCGGTCGGATGGCCATGCGACCGCCGCAAGAGAGATGCGCGAGAAGATCGAAGCGTTTCAGGCCAAACCAAATAGACGAAGAAACCAAAGAAGATAAATCCGACGTCAAAATGTTGACAGCGAAAAAAGAAGATAAAGATACAACCGTGCAAGCATCTCCCGAGAAGAAAACGAACTGTAATAACGAAGTGAAACGGCTCAAATTTTACGGAGCCGGTCCGAAAATGTCGCTCACCAAAAGCCGGGAGTGTAAAAAGCTCTACACACccaagaaaaaagtcgatccgCTGGCCAAATATATATGTTTGAACTGCAATAGAGGCGATGCGGAAGAGTCAATGTTGCTGTGCGACGGCTGCGACGACAGCTTCCATACGTTTTGTCTCATCCCGAAGCTGAACGAAATCCCCAAGGGCGACTGGAGGTGTCCCAGGTGCGTTGCAGAGGAGGTTTCCAAACCCGTGGAGGCGTTCGGGTTCGAACAGGCCCATCGAGAGTACACCCTACAGCAGTTTGGCGAAATGGCAGACCAGTTCAAACAGGAGTACTTCAACATGCCCATAAACGCGGTCCCGAAGGGCACGGTGGAGAAGGAGTTCTGGCGGATAGTCTCCTCCCTCGACGAGGACGTCACCGTCGAATATGGCGCCGATCTCCACACTATGGACCACGGTTCCGGTTTCCCCACCAAGTCGTCGCTCAATTTACAGTCGTGCGACGACCGGTACGTCAATTCGCCGTGGAACCTCAACAACCTGCCCGTGCTGGAGGACTCCGTCCTGGGCTACAtcgacgccgacatttccggcATGAAGGTGCCGTGGATGTACGTTGGCATGTGTTTTTCGACGTTCTGCTGGCACAACGAAGACCACTGGAGCTACTCCATCAACTATCTGCACTGGGGCGAGGCGAAAACCTGGTACGGGGTGCCCGGCGGTTTGGCCGAGGACTTCGAGCTGACCATGAAGGCGGCCGCCCCGGAGCTGTTTCAGTCGCAGCCTGACCTCCTGCATCAGCTCGTCACCATCATGAATCCCAACATACTGATGAAGGTTGGCGTTCCGGTGTACCGGACGGATCAGGAGGCCGGCGAGTTCGTGATCACGTTTCCCCGGTCGTATCATGCCGGATTCAACCAAGGGTACAATTTCGCAGAAGCCGTCAACTTCGCGCCAGCAGACTGGCTGTCGACCGGTCGCGATTGCATATCTCACTACGCCAGTCTGAAGCGCTTCTGCGTATTTTCCCACGACGAGCTGATCTGCAAGATGTCGTCATGCGCAGACCGACTCAGTTTGAACTTGGCCGAGGCGGTGCACCAGGACATGTTTCGGATGATCGAAGTCGAAGCCAAACTGCGGAGAGAAATTTTAAGCAAGGGTATCCAAAATACGGAACGCGAAGCGTTTGAAGCCTTAGCCGACGACGCCAGACAGTGCGAAGAGTGCAAAACCACGTGCTTCCTTTCGGCGCTAAAGTGCGCTTGTCGTCCTGACGTACTGGTGTGCTCCCGTCATTACGACAAGTTGTGCTTGTGCGAACCGAAATGCGACCCCGACTGTTACACGTTTCTCTTTCGCTACACTCTAGTCGAGCTACCGAACATgctcaacaaattgaaaaaccgagTCGGTTACTTCGAAATATGGATCGATCAAGTGAGGGAAGCGCTGGGCGCCGACTGCACGAAAAAACTCCAGTATGACGAGCTGCGCGCCTTATTCGATGAAGCGTTGCAGAGGCGCTTGCCGAAATGCGAACTGCTCGACAACCTGAAGGAAGCGGTCAAACACGCGGAGAATTGCGACGACATCGCcgaaaaaatcatcaagatGATGTCGAGCCGCCTGCGTTACCAGCAACAAAACAAACTGACCATACGCGAACTGATGGAGTTTAATCTGGAACTTAACAAGCTGCCTTGTCACATCTCGCACGCCGAAAGCATCCAGGAGCTGGTCCAGAAGACAGAGCGGTTTTTGTACGAAAGCGAAGAACACCTCGGACAAAACCTGGGCGAAGTTTCCGTTAACAAACTCAAGGCGTCGATCGCTTCCGCCGAGGACTCCATGGTGAGCTTCCCGAATCTGCCCAAGCTCAAGTCCAAATACGAACAGGCCGCGTGGCTGAACAAAGCCCTCACGTGGGAAGATGACGATCACCTGACCATGGCCGACATCAAAGCCACCGTCATGGCCGGCGAACGTTTTCCGTCCAATCCGGAAATCGAAAATCAACTCAACAAGTTCAGAACGCTGGTGAAAAAAGGCGAGGAGTGGGAAGCGAGGGTGGCGTGCATCTTGATCGGTGATCAGACCGTGAAAGTCAACGACATTGAAACGCTGTTGGACGAAGCCGAGGAGCTGCATTACATCCTGCCCAACGAGGACAAGCTGCGGGAAGCTCAGGCGCGCGCCTCGAAGTGGCTCAAAGAGCTCAAAAAGATCAACAGCTACGAGCACTATCCGTACTTGGAAGAGGTGGAGGAATTGCACGTCAAAGGGCAGAAGCTGGCGGTGAAGCTGGACGAGGTTGCGCAGCTGCACGGTTCGATTTCCGAAGCCAAGAAGTGGAAAAATCAGGTGACGCAGATGTTCCTGTACGACCAGGCCAGCCTGATGGAGGCGATCTCGCCGCGCGCCAAGGACGATCACGACATATTCAACTTGACCAGCGACATGAACAATGAAGTCGTGACGCAGCTGTTTAAAAAGGCCGAAGCCAGCGAATTAAAGTCCATGCGCGGCCACCGCTCCGCCAACCAGTCCAAGAACCGCGACATAGCCTCCTTCTGCAATTGCTCCAAGCCGTGGCGGGGCCCGATGGTCCAGTGCGAGCTGTGCAAGGATCGCTTTCACGAAAACTgcattaaaaaaccaaagtacAAAATCAAGGCGCGTCGCCGTTTCTTGTGTCGCGACTGCCACCGGACCAGACGGCCGTACTTGGAGAGCGTCACGCCCGTCCTGATGGCGTACGACAACATGCGCGTCAAGTTTCCGGAAGGCCAGGCGTTGCAGTACCTCACCGAGCGAGCGATGGCGTGGCAGGAGAAGGCCAAGGCACTGCTCGAAGCCGGCAGCATATCCGACAACAGACGCATGAAGCTGTGCGAGGAGCTACTGATGGAAGGCGACCTTCTGGAAGTGGCCGTTCCCGAAACGAGCCTTCTGTGGGAGCGGCTCGAGGACTATCCGGATAGGAAGTCGACCGCCACGGATTTTGATGCCTCACCATCTAAACGACGAAACTCGAGAGCGCCGAGCGGCGCTTCGTCTCCCAAAAGGCCGCGGATCTGGCGAAAATTGAATTCGTCCCTGGAAgttgaagaagaacaagaagaagaggaagaaatGGAAGTGGAAGAAGAACCCGAAGAGAGCGAGGAAGAACCGGACGAGGAGCAGTGTGCGGCCACGAAATGTCTTCCGCCCCCGTCGAATCGCAAGAAAGTGTCGTGGATACAGTGCGATGGGGACTGCAACAAATGGTTTCACATGCATTGCGTGGGCGTTAAAGCGAACGAACTGGACAAAAACGACGACTATTTCTGCAAGTCTTGCACGAAACGGTGTGGCGTCTGA
Protein Sequence
MMPKSFLNNLDKMIKSAVKEVLCIPSDTPDHLLYSPRTHKGLGLIKASWEAFLQRFNICKTLEKSDNQLVPRIMNLTNEKQICLKALNLTASEDLEISTEDSSLNSTKIRKILRLREFSQWCKLPHKGRGVILFAEYTPANSWMSTRKGLTSSEYTEAIKMNGNVTACRATPGRSQDGNRCRRCSVGIENNVAFETLPHILGDWCPPFAVNVDKLSFIPRVQRLNELDAGTRVKLNFLDQIAKFWELQGSTLKIPTVERRSIDLYVLHNIVRSHGGFKQVTYDRKWSRVAIDMGYTPGKGTIGFILKGHYERLLYPYDLFKAGKTLSPQKGEDMLQAETMDQSSIDTKVIDKSYTPHEIVGRMAMRPPQERCARRSKRFRPNQIDEETKEDKSDVKMLTAKKEDKDTTVQASPEKKTNCNNEVKRLKFYGAGPKMSLTKSRECKKLYTPKKKVDPLAKYICLNCNRGDAEESMLLCDGCDDSFHTFCLIPKLNEIPKGDWRCPRCVAEEVSKPVEAFGFEQAHREYTLQQFGEMADQFKQEYFNMPINAVPKGTVEKEFWRIVSSLDEDVTVEYGADLHTMDHGSGFPTKSSLNLQSCDDRYVNSPWNLNNLPVLEDSVLGYIDADISGMKVPWMYVGMCFSTFCWHNEDHWSYSINYLHWGEAKTWYGVPGGLAEDFELTMKAAAPELFQSQPDLLHQLVTIMNPNILMKVGVPVYRTDQEAGEFVITFPRSYHAGFNQGYNFAEAVNFAPADWLSTGRDCISHYASLKRFCVFSHDELICKMSSCADRLSLNLAEAVHQDMFRMIEVEAKLRREILSKGIQNTEREAFEALADDARQCEECKTTCFLSALKCACRPDVLVCSRHYDKLCLCEPKCDPDCYTFLFRYTLVELPNMLNKLKNRVGYFEIWIDQVREALGADCTKKLQYDELRALFDEALQRRLPKCELLDNLKEAVKHAENCDDIAEKIIKMMSSRLRYQQQNKLTIRELMEFNLELNKLPCHISHAESIQELVQKTERFLYESEEHLGQNLGEVSVNKLKASIASAEDSMVSFPNLPKLKSKYEQAAWLNKALTWEDDDHLTMADIKATVMAGERFPSNPEIENQLNKFRTLVKKGEEWEARVACILIGDQTVKVNDIETLLDEAEELHYILPNEDKLREAQARASKWLKELKKINSYEHYPYLEEVEELHVKGQKLAVKLDEVAQLHGSISEAKKWKNQVTQMFLYDQASLMEAISPRAKDDHDIFNLTSDMNNEVVTQLFKKAEASELKSMRGHRSANQSKNRDIASFCNCSKPWRGPMVQCELCKDRFHENCIKKPKYKIKARRRFLCRDCHRTRRPYLESVTPVLMAYDNMRVKFPEGQALQYLTERAMAWQEKAKALLEAGSISDNRRMKLCEELLMEGDLLEVAVPETSLLWERLEDYPDRKSTATDFDASPSKRRNSRAPSGASSPKRPRIWRKLNSSLEVEEEQEEEEEMEVEEEPEESEEEPDEEQCAATKCLPPPSNRKKVSWIQCDGDCNKWFHMHCVGVKANELDKNDDYFCKSCTKRCGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-