Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949128115.1
Location
OX421968.1:45046456-45069736[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-25 5.2e-22 79.3 0.0 2 89 113 197 112 197 0.95
2 3 8 3.5e+04 -3.5 0.0 48 76 796 822 794 832 0.65
3 3 0.034 1.5e+02 4.1 0.0 32 80 1231 1281 1228 1288 0.74

Sequence Information

Coding Sequence
ATGACGACAATGTTGAGTGCTAAGTCGGAAAAGCTGCCCAGTCCAGCCAAGGTCCAAAAACCGTCGCCCAGCAAGCAGGACTCCAGTTATGGCTACGAAAAGGAAGCCTTCGAATTCGACCCGCCCCCGGAGGCGCCCGTTTTCTACCCCACGGAAGAAGAATTCAATGACCCCATGGAGTACATCAACAAAATCCGGAAGCACGCCGAAGGATCCGGGATTTGCAAAATCAAACCGCCCCCGAACTGGCAGCCGCCTTTTGCAGTCGACGTGGACAAACTGAGATTCACGCCTCGGATTCAAAGACTCAACGAGTTGGAGGCCAAGACGAGAGTGAAACTAAACTTCTTGGATCAGATTGCTAAGTTCTGGGAACTTCAAGGCTCCACATTGAAAATTCCGATGGTGGAAAAGCGATGCATCGACTTGTACACTTTGCACACAATCGTGCAGAGCCAAGGTGGTTTCGATCAGGTCACCAAAGACAGGAAATGGTCGAAGATCGCGATTAACATGGGATACCCGCCGGGTAAAAGCAGTATAGGCACTATACTTAAAACACATTACGAGAGACTGATCTTCCCGTTCGATCtattcaaagttggaaaaacaatgaacttcAAAATGACACAACCCATTAACGAGGACCCAGAGAAGACCGATAAAGATTACAAACCTCATGGAATTGTGGGAAGGATGGCTATCAAGCCGCCGCCAGAGAAGCATGCCAGGCGTTCGAAACGTTTTGAAGCAGACTCAAAAGATGACGTAAAGGAAGAGTGCAAAGATTCCAAAGAATTGAAGCGTTTACAATTTTACGGAGCTGGCCCGAAGATGACTTTGGTGAAAGAAGATGAGGAAAAACCGAGGACTAAGCCGGTCAATTACGAGTTCGATCCGCTTGCTAAATACGTTTGCCACAATTGCAACCGTGGTGATTCCGAGGAGTACATGCTATTGTGTGACGGATGCGACGACAGCTATCACACATTTTGCTTGATGCCACCGCTCAGTGAAATTCCGAAGGGTGACTGGCGTTGTCCCAAATGCGTGGCAGAGGAAGTTTCCAAACCAATGGAGGCTTTCGGTTTCGAACAGGCCCAGCGCGAGTACACTTTGCAGCAGTTCGGCGATATGGCGGACCAGTTCAAGAGCGAGTACTTCAATATGCCCGTTCACCTGGTCCCGACGGGCACTGTCGAAAAGGAATTCTGGCGCATCGTGTCGTCCATCGATGAAGATGTCACAGTCGAATATGGCGCCGATCTTCACACCATGGACCATGGTTCCGGTTTCCCCACAAAGAATTCGGTGAATTTGCTGCCCGGTGACAAGGAGTACGCCGATTCCGGGTGGAACTTGAACAATTTGCCTGTGCTCGATAACTCTGTCCTGGGCCACATAAGCGCGGACATTTCCGGCATGAAGGTGCCCTGGATGTACGTGGGCATGTGTTTCGCAACGTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCCATCAACTATCTGCATTGGGGAGAGCCTAAGACTTGGTACGGAGTTCCGGGTAAGATGGCCGAGGCTTTCGAGGACACGATGAAGTCGGCCGCTCCGGAACTGTTCCAGTCGCAACCCGATCTTCTCCACCAGCTCGTCACCATCATGAATCCGAACATTTTGATGAAATCCGGAGTTCCCGTGTTCCGCACCGACCAGCATGCCGGCGAATTCGTCATCACATTCCCGAGAGCGTACCATGCAGGATTCAATCAAGGGTACAATTTCGCGGAGGCAGTCAATTTTGCTCCGGCAGATTGGTTGAGGATGGGCCGGGAATGCATCATACATTACTCCAATTTACGTCGGTTCTGCGTGTTTTCTCACGACGAACTGGTCTGCACGATGGCGGCAAATCCTGATAGGTTAGGGTTGACCATAGCCGCAGCAACTTATCAAGACATGCTCCAGATGGTCGAAACAGAGAAATCTTTGAGGAAGACGCTGCTCGATGCTGGAGTGTCAAATGCCAGACGTGAAGCTTTCGAGCTGATCCCCGACGACGAGAGACAATGCGACACGTGCAAAACTACGTGCTTCCTTTCTGCAGTGGTTTGCAAATGCTCGCCGGCAACCGTGGTGTGCCTGCGTCATTACGCGAATCTTTGCAGTTGCAGTCCAGACGATTACACTCTCATCTACCGGTACACTTTAGATGAACTGCCAGTGATGTTGAAGAAGCTCAAACTGAAGGCAGAGTCTTTCGACCATTGGGTCAGCCGCGTCAAAGACGCCCTCGATCTCAAAACGCCGAAGACACTGACACTGCAGGAGCTGAAGGCTTTGCTCAACGAAGCCGACGGAAAAAAGTTCCCCAAGTGCGAATTGCTGCAGACCCTCACCGACGCCGTAGAAGACGCCGAAAAATGTGCCAGGGTCATACAGCAGTTGGACTTGAACAAAATGCGCACACGCACACGAAATTCCTCTGATACCAAATACAAGTTGACCTTGAAAGAACTGATACTTTTCCACGAGGAGCTGGACAGCCTGTCCTGCATCCTGGACGAGGCCAAGAGCATCAAGGAGTTGCTGGAGGAGACGAAAAAATTCGAAGCCAGTAGCCAGTCGCTGATGGAGCAAAAGCTGAGCGAGGTATCCATGCCTGAACTGGAAACTTGCATCAATCAAGGGAGCAACTTGTGCATCGAACTTCCAAACTTACGTAGTATTAAGATGAGATTGCGTCAAGCCACTTGGCTGAATGACGTATTGTCCTATAAAAAGCGCACTGAGGTCTTGGGCCTGGAGTCCATAAGGAACATTATCAAGACTGGCAGCCAGCTCCCACCCAATCCGGAAATCGAGCATGAGCTGGGCAATTTGCATGTCCTACTTAAGAAGAGCGAAGAATGGGAAGAGAAAGTGAAGAGCATATTAAAGGACACGGGAAGTGAGGTTCTGATCGAAGTGGATAAGCTTCTGAAGGAAGCCAGCCAGATTACGTCGTACCTTCCATCCGAGGAGTTCCTGTTTGACGCCATGGATCGCGCCAGGGATTGGCTGCGTCAACTTGAAGAAATGAACTCGGCCGACTATTATCCGTATTTTGATGACATGGAAGACTTGATCAACAAAGGACAGTCGCTGTCGCTTCATTTGGTCGAAGTGAACAAACTGAAGTCTTATTTGGAGGCTGCGAATGGCTGGAAAGATAAGACGGTCCGTTCGTTCCTGCGCCGTAACTCGTCGTGTAATTTGATGGAGGCGTTGTCGCCCAGGGTTCACTTGAATAGCAACACAAAAGGTCGCCAGAAACGGAGTCTGGACGACGAACACGGGATTTTCAAATTGACCAGCGACATGGATCCGGCCACCGTCGTGTCGCTGTTCCGCGAGGCGGAATCCAAAGAAATCGAATTGATGAAAAGTCTCCGTGCGACCAACCAAGAAAAGAGCTTGGACCCGAGCGATTCGGCTACATTCTGCGTCTGTCAGCGCGGTCTCTTCGGCATGATGATGCAGTGCGAGCTGTGCAAAGATTGGTTTCATTCCATGTGCGTGCAACTGCCCAAGGTTGCGTCCTCAAAGTACAAAGGCAATTTTACGAGCGTCGCCATGCATTTGGGCTTCAAAGATTGCAAATTTCTCTGTCCCACGTGCTTCAGAACGAAGCGACCGAGGCTGGACGCCATCCTTCTCTTGCTTATGTCGCTCCAGAAGCTCTACGTGCGCGTGCCAGAAGGCGAGGCCCTTCAAAGCCTCACCGAGCGCGCCATGAACTGGCAAGACCGCGCGCGTCAACTGATGGCGTCGCCGGAAATGGAGGCGGCCAAGAATCGGCTGTCGTCGTTCAGCCAGAAGTATTCCGAAGCGGCCGCCAGGCAGAGGACCGAAAAGATCATATCGAACGAGCTGAAGCGGGCCTACAAGAATCCGGAGCTACTGCAGCGCGTCCAAGAGATCGCACCGTATAGCGGTGTCGTGAACGCCGCGAACGCCGCCGAAGAACACGACCAGGCGACGAAAACTGACGCTGCCCCCGCGTCAGTCGGCGATTCGTCTGCCGACGAATCCAAGGAATGTCCGCCAGACGATCGCATGGGCGAACACGCCTATTCCCTGCATCTGCCCAAGTTCGACACCGGCGAATACAGATTGCAAATCAACGCagacttgaaacaaaaaatcgaagagCTCCTGATGGAAGGCGACCTCCTCGAAGTCTATTTGGACGAGACGTTCCAGATCTGGAAAGTTCTACAAGCATCACGGGATCCGGAAAAGGAACCCATCCTGATCGATTTCGATACACATTACAAAATGAGTCCGTCAAGGAGAGGTCGCAAACGCCGCTCCGATGAGGTCGATTCGCAGGTCAAAAAGGTTCGAACTCCGATCAAGGCTGAAGAGAGAAAAGGCAAAATGTGTCGATCCAAAGACGCGACTAGCGGTAAAAAGGAGGGCGCGAGACGCAAAGGACGCCGCCGTCAGTCGACCGGATCCGAAGACGACGATGAAGACAGCTGCGCCGCCACTGGGTGCCTGAAACCCCTGGGAGACAACGTCGATTGGGTTCAGTGCGACGGCGGCTGTGATAAATGGTTTCACATGGCCTGCGTCGGCTTGTCCGCACAGGATATCAATGAAGACGAAGACTACATCTGCATGACCTGTTCACAAAATACAACTTACGGAACACTGGAGGGCTTGCCAGACGCCCTGGAGTGTTCCGCCCCAGCGACCCAGCCTTCCGTATCTAAAGACTCTGTTTAG
Protein Sequence
MTTMLSAKSEKLPSPAKVQKPSPSKQDSSYGYEKEAFEFDPPPEAPVFYPTEEEFNDPMEYINKIRKHAEGSGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSTLKIPMVEKRCIDLYTLHTIVQSQGGFDQVTKDRKWSKIAINMGYPPGKSSIGTILKTHYERLIFPFDLFKVGKTMNFKMTQPINEDPEKTDKDYKPHGIVGRMAIKPPPEKHARRSKRFEADSKDDVKEECKDSKELKRLQFYGAGPKMTLVKEDEEKPRTKPVNYEFDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGDMADQFKSEYFNMPVHLVPTGTVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSVNLLPGDKEYADSGWNLNNLPVLDNSVLGHISADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGKMAEAFEDTMKSAAPELFQSQPDLLHQLVTIMNPNILMKSGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECIIHYSNLRRFCVFSHDELVCTMAANPDRLGLTIAAATYQDMLQMVETEKSLRKTLLDAGVSNARREAFELIPDDERQCDTCKTTCFLSAVVCKCSPATVVCLRHYANLCSCSPDDYTLIYRYTLDELPVMLKKLKLKAESFDHWVSRVKDALDLKTPKTLTLQELKALLNEADGKKFPKCELLQTLTDAVEDAEKCARVIQQLDLNKMRTRTRNSSDTKYKLTLKELILFHEELDSLSCILDEAKSIKELLEETKKFEASSQSLMEQKLSEVSMPELETCINQGSNLCIELPNLRSIKMRLRQATWLNDVLSYKKRTEVLGLESIRNIIKTGSQLPPNPEIEHELGNLHVLLKKSEEWEEKVKSILKDTGSEVLIEVDKLLKEASQITSYLPSEEFLFDAMDRARDWLRQLEEMNSADYYPYFDDMEDLINKGQSLSLHLVEVNKLKSYLEAANGWKDKTVRSFLRRNSSCNLMEALSPRVHLNSNTKGRQKRSLDDEHGIFKLTSDMDPATVVSLFREAESKEIELMKSLRATNQEKSLDPSDSATFCVCQRGLFGMMMQCELCKDWFHSMCVQLPKVASSKYKGNFTSVAMHLGFKDCKFLCPTCFRTKRPRLDAILLLLMSLQKLYVRVPEGEALQSLTERAMNWQDRARQLMASPEMEAAKNRLSSFSQKYSEAAARQRTEKIISNELKRAYKNPELLQRVQEIAPYSGVVNAANAAEEHDQATKTDAAPASVGDSSADESKECPPDDRMGEHAYSLHLPKFDTGEYRLQINADLKQKIEELLMEGDLLEVYLDETFQIWKVLQASRDPEKEPILIDFDTHYKMSPSRRGRKRRSDEVDSQVKKVRTPIKAEERKGKMCRSKDATSGKKEGARRKGRRRQSTGSEDDDEDSCAATGCLKPLGDNVDWVQCDGGCDKWFHMACVGLSAQDINEDEDYICMTCSQNTTYGTLEGLPDALECSAPATQPSVSKDSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01480636;
90% Identity
-
80% Identity
-