Basic Information

Insect: Anarsia innoxiella
Gene Symbol: -
Assembly: GCA_947563765.1
Location: OX387399.1:838461-839783[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.3 3.4e+02 2.4 2.2 3 19 148 164 146 169 0.90

2 8 0.00082 0.053 14.3 0.6 3 23 179 199 178 199 0.97

3 8 0.93 60 4.7 0.9 1 21 203 223 203 224 0.91

4 8 0.0011 0.069 14.0 0.7 2 23 239 259 238 259 0.96

5 8 2.3e-05 0.0015 19.2 0.7 1 23 265 288 265 288 0.94

6 8 0.00016 0.011 16.5 0.5 1 23 294 317 294 317 0.97

7 8 8.1e-07 5.2e-05 23.8 1.8 1 23 323 345 323 345 0.99

8 8 0.00011 0.0073 17.1 5.4 1 23 351 373 351 373 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.3	3.4e+02	2.4	2.2	3	19	148	164	146	169	0.90
2	8	0.00082	0.053	14.3	0.6	3	23	179	199	178	199	0.97
3	8	0.93	60	4.7	0.9	1	21	203	223	203	224	0.91
4	8	0.0011	0.069	14.0	0.7	2	23	239	259	238	259	0.96
5	8	2.3e-05	0.0015	19.2	0.7	1	23	265	288	265	288	0.94
6	8	0.00016	0.011	16.5	0.5	1	23	294	317	294	317	0.97
7	8	8.1e-07	5.2e-05	23.8	1.8	1	23	323	345	323	345	0.99
8	8	0.00011	0.0073	17.1	5.4	1	23	351	373	351	373	0.98

Sequence Information

Coding Sequence: ATGGACTATCGTGACCACTGTCGCACTTGCTTAGAGAAAAGCAGTGAAATGCGTCATGTACATTCATATATCGTGATAAATGGACAAGACACTCGACTCTCCGATATTTTGCTTAATTTTTACAGTTATCAGGTACCAGAAGAACTAACAGGCCCGGAGAATATATGTATAAGTTGCGTCCATCAGTTAACATTAACACATGCTTTTAAAAACCTTATTGAATCATCTGCTAAAACATTAACAGAAGCTGCTCAAAACTTAGGAAGTGACGACAACAATGAATGCGATTATGATACTGATTATAAACCAGAAGATCACAAAGCTGTGTCATCTTCAGATAATATTAAACCTAAATCATTTAGAAGAATTAAAACTCAAATGCCAATGAAGAGAAAAAAGCAAGTTGTCTTAAAAGGTCCAACTCCAAAACGAAAAATCTTCTGCGTTGAATGTAAAACAGTATTCCATACAGGCGAATCACTATTAGAACATTGTACAAATAACCACCCACCAAAATCACTAACAGGCAGAGATTGTAACTACTGCAATGAAAAATTTGAAGATTTCAAAGAGCTAGTTATACATAGGAAACTACATACAAAACCGTACCTTTGTTTAACTTGCTGGTCAGGATTCTTTCAAGAAGACGATTTAAACAACCATACATGTCAAGCCACTCAGAACAGAAGAAGCAGAGAAGATGAAAGGGTTTGCCAATGTGACCAGTGCGGAAAATCTTACCCACCAGGATACATTAAAGTCCATATGATGACACATGGCAACGAATTAAAATACAGCTGTAAATACTGTCCGAAAAAATTCAAAGTTGCAAACAGTTTAAATTCACACGTGTTATGGAATCATAAAAGAACGAGAGATCACAAATGTGAAGTTTGTGGAGCTATGTTCATATCAGCCAGTGCTCGTAGTACACATATAAGAAAAAATCATTTAAAAGAAAAGAAGTATAGTTGCGAGAATTGTGCAAAGAGGTTCTTTTCCAAATCTGAATTGCAACGGCACATGTTAACTCATACGGGAGTTAAGAATTTCCATTGTCATATGTGTGACAAGTCATATCAAACACGGTACGGTTTAAACGTACATTTAAAGTCGCATACACATATGAATATTATTGTAAATAATAGTGTTTTAGATATGTAG
Protein Sequence: MDYRDHCRTCLEKSSEMRHVHSYIVINGQDTRLSDILLNFYSYQVPEELTGPENICISCVHQLTLTHAFKNLIESSAKTLTEAAQNLGSDDNNECDYDTDYKPEDHKAVSSSDNIKPKSFRRIKTQMPMKRKKQVVLKGPTPKRKIFCVECKTVFHTGESLLEHCTNNHPPKSLTGRDCNYCNEKFEDFKELVIHRKLHTKPYLCLTCWSGFFQEDDLNNHTCQATQNRRSREDERVCQCDQCGKSYPPGYIKVHMMTHGNELKYSCKYCPKKFKVANSLNSHVLWNHKRTRDHKCEVCGAMFISASARSTHIRKNHLKEKKYSCENCAKRFFSKSELQRHMLTHTGVKNFHCHMCDKSYQTRYGLNVHLKSHTHMNIIVNNSVLDM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -