Ainn003137.1
Basic Information
- Insect
- Anarsia innoxiella
- Gene Symbol
- -
- Assembly
- GCA_947563765.1
- Location
- OX387417.1:5084424-5088159[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.17 11 7.0 2.5 2 23 147 169 146 169 0.95 2 12 0.69 45 5.1 0.4 1 23 175 197 175 197 0.92 3 12 0.22 14 6.7 0.1 3 21 227 245 225 246 0.89 4 12 0.025 1.6 9.7 0.7 2 23 282 303 281 303 0.95 5 12 0.37 24 6.0 0.5 2 20 339 357 338 358 0.93 6 12 0.00044 0.028 15.2 0.5 1 21 360 380 360 381 0.95 7 12 8.9e-05 0.0057 17.4 1.4 2 23 397 418 396 418 0.97 8 12 2.3e-06 0.00015 22.3 0.4 1 23 425 447 425 447 0.97 9 12 0.012 0.79 10.7 0.8 3 23 455 475 453 475 0.95 10 12 2e-06 0.00013 22.6 1.8 1 23 481 503 481 503 0.98 11 12 0.00048 0.031 15.1 2.1 1 23 509 531 509 531 0.97 12 12 0.01 0.68 10.9 4.0 1 23 537 560 537 560 0.97
Sequence Information
- Coding Sequence
- ATGAGTGACTCTTTATCAGTGTACTGCAGATTTTGCGCCGAACAAAAGCATTATACCGAAATTACAAACTTAAAAACGCAATCCCACAAATTGGAATTAATAATAGAAAAACTATCAATATTCGTTGTAAATCCAATAGAATTTCACATAAAACATTTACCAGAGACAATTTGCAGCCAATGTTTTGATTCTCTTAATAATACGTATGAGTTTTACAGAAAAATTCAAGCTTCACAAATTTCGTTATTGAATCTCATTTCGAACGACATTAAAGGAGAAATATTGGACGAAAATGTAAACAAGAACAAAAGTGAATTAATGATCGTTACGGTGAAGCAAGAGAACACAGAATTTGATGATTTAGACACCCATTTCACGGACTTTGAAGGAAACGAAGAGGATAGTAAATCTCTCATAACTTGGGAGATCTATCCATGTTTTTGTAAATACTGTGAAATTAAAGTGGATAATTTAAATCGTTTGAAAGATCATTTGAGGAAGGTTCATGATAAATGTGCTGGGTTTTATTGTGTGGATTGCGGATTGGATTTTGATGTGTTTCATATTTTTGTGGCTCATCTCCGTGAACATGTGGACAGTTTAAGCAACTTCTGTGAATACTGCAACCTAAAACTACAGGATGACGACCATATATTGCAACATACTTCAAAAACAACCTGCATTAATTGTGGCGAAGCCTTTCTAGACAAGAAATCGTTGCAAACACATATAAAACTGTATAGTAACAAAGTTGTGACGCGGAAGAAATTGAAAAAGACCGAAAAGACTGTTAAAGAATATAATAAAGACTTGGTTATAGAATCGTGGGATGATTATCCTTGGATCTGTAGATATTGTGATAAGCAGATGAAAAACCAGGAAACATTCCGGGAACACGTCAAAGGCCACGGTAGATGTTTCGGAGTTAAATGTACAGATTGCGACGACAATGACATAAAGACTTTCTCAAAATTCGTTCAGCATGTCATTTGTCATAGGTCTGGATTAAAATCATACTGCCCATACTGCAACATAAAAATCCAAAACGAAACACATTTAGAGACCCACAAAACCGAATACCAATGTACAAATTGCGATGAAACTTTCCAAGACAAGAAATCACTAGACGTCCATACTAACTCGTACAAAAAATACCGTTCTAAAAGGATTTACACGGAAGAAGATTTAACTTGCAAAATCTGCAAAAAAGTCGCTAAAAGTGCAAATAATCTACACGATCACATGAAAGTCCACGAAAATCGATCTAGAGATTTCTCTTGCGACAGATGTGGGCTATCATTTTACTCGAAAGGTAACTTAAAAAATCATATAATTATACACGAAAATCCTGAGCCTCAAATCTGCAAAATATGTAACAAGAGCTTCTTAACCCTCATTCGTTTGAGAAAGCATCTAGTCTCACATAATAGTGCGAAACCATTCTCATGTCCGGAATGCAACCGAACGTTTCGCATAAAGAAATATTTGAAGAGTCACATGATTACGCATGGCACGGAAATGCCTTTCAGTTGCCAATTTTGCGATAAAAAATTTCGATTTAGCGGCGTCCTAAAAGTACACGAACGTCAGCATACAGGGACGAGGCCGTATTTTTGTGAGCTATGCAATAAAGACTTTTTCAGTTGGTCAAATTGCGATAAACATTTGCGCAGAATGCACGGGATAACTTTAGCGAAAACAAAACTAACGCCCGAAGGCAGAATACCTATAAACCCAAAAAACATGAAACCTAAAAAACTAGAATTGGATAATGCGAAAGAATGGAGTGAACAAGTCATGGTGCATAGGAAACGTGGTAAAAAAGCTGTTAAAAATGATCAATAG
- Protein Sequence
- MSDSLSVYCRFCAEQKHYTEITNLKTQSHKLELIIEKLSIFVVNPIEFHIKHLPETICSQCFDSLNNTYEFYRKIQASQISLLNLISNDIKGEILDENVNKNKSELMIVTVKQENTEFDDLDTHFTDFEGNEEDSKSLITWEIYPCFCKYCEIKVDNLNRLKDHLRKVHDKCAGFYCVDCGLDFDVFHIFVAHLREHVDSLSNFCEYCNLKLQDDDHILQHTSKTTCINCGEAFLDKKSLQTHIKLYSNKVVTRKKLKKTEKTVKEYNKDLVIESWDDYPWICRYCDKQMKNQETFREHVKGHGRCFGVKCTDCDDNDIKTFSKFVQHVICHRSGLKSYCPYCNIKIQNETHLETHKTEYQCTNCDETFQDKKSLDVHTNSYKKYRSKRIYTEEDLTCKICKKVAKSANNLHDHMKVHENRSRDFSCDRCGLSFYSKGNLKNHIIIHENPEPQICKICNKSFLTLIRLRKHLVSHNSAKPFSCPECNRTFRIKKYLKSHMITHGTEMPFSCQFCDKKFRFSGVLKVHERQHTGTRPYFCELCNKDFFSWSNCDKHLRRMHGITLAKTKLTPEGRIPINPKNMKPKKLELDNAKEWSEQVMVHRKRGKKAVKNDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -