Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_947563765.1
Location
OX387418.1:1191003-1195298[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.0073 0.48 11.3 0.1 3 21 80 98 80 101 0.90
2 18 1.5 95 4.1 1.4 3 23 124 144 122 144 0.91
3 18 0.00025 0.016 16.0 0.2 1 23 148 170 148 170 0.96
4 18 0.34 22 6.1 1.3 3 21 178 196 176 197 0.93
5 18 5.1 3.3e+02 2.4 1.0 2 20 205 223 204 227 0.75
6 18 0.0028 0.18 12.7 7.4 1 23 234 257 234 257 0.94
7 18 4.3e-05 0.0028 18.4 0.4 1 23 261 284 261 284 0.97
8 18 0.76 49 5.0 1.1 1 10 290 299 290 307 0.93
9 18 0.19 12 6.9 0.0 2 23 347 369 346 369 0.94
10 18 8.7 5.7e+02 1.7 0.3 3 23 398 419 396 419 0.91
11 18 0.0012 0.08 13.8 2.1 2 23 442 463 441 463 0.97
12 18 0.0062 0.4 11.6 0.5 1 23 467 490 467 490 0.94
13 18 0.33 21 6.1 0.1 3 21 496 514 494 515 0.93
14 18 0.033 2.2 9.3 1.5 1 23 522 545 522 545 0.88
15 18 0.58 37 5.4 1.7 1 23 551 574 551 574 0.88
16 18 0.0039 0.25 12.2 0.1 2 23 580 601 579 601 0.92
17 18 0.0034 0.22 12.4 2.5 1 20 607 626 607 629 0.94
18 18 0.00017 0.011 16.5 5.1 1 23 635 658 635 658 0.97

Sequence Information

Coding Sequence
ATGTTTGAAGGAGTGTTAGACACATCAGAAAACAACGCACTCCTCATATTGAACAACTCGACGGCTCTGCCCCTTAGAGTCAAGAAACGGTGCTTCGAATGTTGTATGTGCAACGAAAACTATGAAGAGTTTGAAAACTTAAAGTGCCATGTTCAGTCTAAACATGTAGACAGTGATAGACAATCTGTTTTTATTAAAGCAACTGTTCTTCCTCGTGTGGAAATATCGAATCTAGGATGTAAACTATGCCCTAAAACGTTTTCTAGTCTCGAATCAGTTGCACAGCATTTAGTCGATATACACGAACTTGGAATTGACATGAAATCTAGTCTTGGTCTAGTTCCTATACGAATAGAAAAAGATCTAGCGTGCTTAGTTTGCAAAAAAAAGTTTTTAAAAGCCTATAGTCTCCACTTACACTCAGGTACCCATTTCCTAAAGTATCTTTGTAATATTTGCGGCAAAAACTTGGAAAGTCAGACTGGCCTTCGGGTGCATATCACTAGACACAGCTTTGGAGTCAAAATATTTTGCAAAGGCTGCAAAAACTTCTTCGACTCGAAAAAAGACAAGAAACAACACTTGAAGATTAGCAAAACTTGCTTACCTTTAAAATGTAAAATTTGCGTAGAGCGTTTCAGTTGTACGGAATCTAGAGTGAACCATATGGTAGAAGTCCACAACTATCCCAAAGAGATGCACAAATGTAGCCATTGCGAGAAGGAGTTTAATTCAAGAGTGTCCTTAACTAGGCACTTCCACGTAACCCATGCTGACAATTTCAAATGTGATATTTGCCAGCAGAGTTTCCGCACTATAGGCGTATTGAAAGCCCATATGGCACGGTACCACACGGGAGAGAAACCATTTCAATGTAATGTCTGTGATAAAGCTTATTACTGCCAAGCTGCGGCGTATCATCAAATAGCTTTTATTTTTGTTCTAGAGCGCAATCCGTTGGGCGAAGCGAGATCCAACGCAAAGCTCCTATTGACGTACACAACGGCGTGCCCGTTCAAGATGCCGCGAGAGTGTATGGTTTGTGTCTATTGCGAGGAGTCTTTCAGAGAGCCGGCCATCTACAGGGAACACGTTATGACAGAACATAAAGATTTCAGCGTGGCCATTGCGTTCAGCCATTTAGCGAGCAACTTCAATGATTACGTCAAAACGGACTGCACGGATTTAGCTTGCCGCATTTGCTCACAACCTTGCGAAACGTTAAACGAAGCAGCGCTACATCTGTTTACAAATCACAACAAGAATATCTATCTCCAGGCTGAACCAGGACTTCAAATGTTCAAGTTTGGACCGGAAAAATGGCGCTGCACACATTGCAAAAATGTATTCGCTACCATAAGAGCTCTGAGTAGACACACGAATACCCATTACCATAAATACACATGCGACATTTGTGCCAAATCGTATTTGAATATGGAGAATTTAAGGAAACATTACATTTTGACGCACGAAAAGAAAATCTTTTGTCCTCGATGTAAGGAAGAGTTCGCCACTGAAGAGTTGAAAAAGGAGCATATAAAAGCAACGAAATATTGCTGGCCTTTTACATGTCCCATGTGCGGTCAGCGGTTTCATAATGTGAGATTAAAAACTGATCATTTGAGTCAAGAACACGGGGTTACAAAGAAGCACGTTTGCGCCCAATGTGGACAAGAATTCCCTAACGCGACTCAACATAACTCCCACTTCATAAGGACTCACACGGAGAGTGCCCTCAAATGTCCATATTGCGACTTGAAGTTCGTGAAAAAAATCGAGCTGGACGACCACGTGGTGAACCATACGAAAGAGAAGAAGTTCCAGTGCGAGTTCTGTTTCAAATGGTTCAGCAGGAAGAAGAATCTGAAACAACATTTGTGGATCCACAGCGAGAAAAAGAGATTTAACTGTACACTTTGTGACAAATCGTTCAATCAGAAAACCTGTTGGACGAGTCACATGAAGTCTTATCACCCAGGGCTTTTAGATAATGTGGAAACTAAACACACAGTAACTCATACGCAGGTTTGA
Protein Sequence
MFEGVLDTSENNALLILNNSTALPLRVKKRCFECCMCNENYEEFENLKCHVQSKHVDSDRQSVFIKATVLPRVEISNLGCKLCPKTFSSLESVAQHLVDIHELGIDMKSSLGLVPIRIEKDLACLVCKKKFLKAYSLHLHSGTHFLKYLCNICGKNLESQTGLRVHITRHSFGVKIFCKGCKNFFDSKKDKKQHLKISKTCLPLKCKICVERFSCTESRVNHMVEVHNYPKEMHKCSHCEKEFNSRVSLTRHFHVTHADNFKCDICQQSFRTIGVLKAHMARYHTGEKPFQCNVCDKAYYCQAAAYHQIAFIFVLERNPLGEARSNAKLLLTYTTACPFKMPRECMVCVYCEESFREPAIYREHVMTEHKDFSVAIAFSHLASNFNDYVKTDCTDLACRICSQPCETLNEAALHLFTNHNKNIYLQAEPGLQMFKFGPEKWRCTHCKNVFATIRALSRHTNTHYHKYTCDICAKSYLNMENLRKHYILTHEKKIFCPRCKEEFATEELKKEHIKATKYCWPFTCPMCGQRFHNVRLKTDHLSQEHGVTKKHVCAQCGQEFPNATQHNSHFIRTHTESALKCPYCDLKFVKKIELDDHVVNHTKEKKFQCEFCFKWFSRKKNLKQHLWIHSEKKRFNCTLCDKSFNQKTCWTSHMKSYHPGLLDNVETKHTVTHTQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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