Basic Information

Insect: Anarsia innoxiella
Gene Symbol: -
Assembly: GCA_947563765.1
Location: OX387420.1:3668299-3672885[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.013 0.81 10.6 1.4 1 23 373 395 373 395 0.97

2 9 0.00012 0.0077 17.0 1.4 1 23 442 465 442 465 0.96

3 9 0.0037 0.24 12.3 0.0 3 23 472 492 471 492 0.95

4 9 3e-06 0.00019 22.0 0.7 1 23 497 519 497 519 0.97

5 9 7e-06 0.00045 20.9 2.9 2 23 525 546 524 546 0.97

6 9 0.00043 0.028 15.2 0.0 1 23 555 579 555 579 0.95

7 9 1.3e-05 0.00086 20.0 1.0 1 23 585 608 585 608 0.97

8 9 0.23 15 6.7 0.2 1 12 614 625 614 627 0.90

9 9 0.00016 0.01 16.6 2.0 1 23 645 668 645 668 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.013	0.81	10.6	1.4	1	23	373	395	373	395	0.97
2	9	0.00012	0.0077	17.0	1.4	1	23	442	465	442	465	0.96
3	9	0.0037	0.24	12.3	0.0	3	23	472	492	471	492	0.95
4	9	3e-06	0.00019	22.0	0.7	1	23	497	519	497	519	0.97
5	9	7e-06	0.00045	20.9	2.9	2	23	525	546	524	546	0.97
6	9	0.00043	0.028	15.2	0.0	1	23	555	579	555	579	0.95
7	9	1.3e-05	0.00086	20.0	1.0	1	23	585	608	585	608	0.97
8	9	0.23	15	6.7	0.2	1	12	614	625	614	627	0.90
9	9	0.00016	0.01	16.6	2.0	1	23	645	668	645	668	0.96

Sequence Information

Coding Sequence: ATGTTGCATAATAGTGGGCCCTATGGGCCGAGTGAAAACCCAATGAATGTGGTTCCGCCGATAAATATGCCTCAAATTTCTACAGGCGTAGATTTAGGTCAAAACTTGAGTAATTTTAATAAAATCGCACAACAGACACCTCAAATGATTAATGGACAGTTTAATATACCTAATTACCAGCCCTATAGTCACTCAACTCTCAATTTAGCCCCACATCTTAATGGTTATTCAAGCTACAATTCGACGACTTTTCATAATAATTGTAGTTTACAAAATACACCGTCATTTAGTGATTCGAGCTGGCAGAGCAATGTAATGCCAATGAATTTAAACACCCATGTAAACCGAACTATTGAGACGTCGAATTTCCAATCAGATCTTGAAAAGAGGCCGCAAGAAGCAATATTTAGAAACGAAGTTACAGAAGATTGTGTAAAAGAAAGAAATTTTCCACTAAACGTCTTTCAAAGGACTGTAAACACTTTCCAAAGTGACATCAACAGTGAAAAGTGTTCAATGTACAATATAAATCAGGATAAATTCAATCATTTCAATCAAAACTTAGATCTTAGCACAAAAACTCAAGAAAAACCATTACTAGATAGTTCTAAAAGAAAAAGCTTAGAAAACACAGTAAGATTAATAGAGGATATACTAATTAACACAACAAAGAATCAAGAAACAAATAATAAAGAAACAGAAGTAAAGAAAACAGAAAAAACTAACGAAACTGCAAAAACAACACAAACATCAACTTTAGAAACAGAAAAACAAAACAACACCGATTCAGATTCAATGACAACGGATAGAACAGAAAGTGATGTTGAAAACTCCAATGACATACAAAACAATGAAAACAAACAGAAAGAACCCTCACCAAAGCATGAAACACCTGAAATAACGGTAAAAGTAGAAGTTAACAACGATCCAGTACCAAATTTGAATATTAAAATGGAAACACTATATTGGACGGATATAGAATACAATACACCGTTTGTCAGAGATTTAAACGGAGTAATGAGAGAAGATGTAACGAGTGATACTATTGTTGAATCTGAAAATAGTGTTAACGAAGCTATTGCTGTTGTTAAAAGTGGTTTAAACCCAAAAAATCATTACGAATGCCCATATTGCAATCTATTATTTGACCACCCTAAGAGATTTCTTATCCACACAAAATGGCACACCTTCGGCTTAACGTACGAGAAGAGAACAGAACTAGCAAGAGTGAGGGAGACAGAAAAGAATCAAAGAAAGGAAGCTAGATTCGTTGACAGATTGAAATCGAAATTAGCAACGAAGAAGACAATGACAGATGTAACTTTTCCTTGTAAAGAATGCGAGAAAGTTTTTCTTTCTAAAAGCAGTTTGAAGAATCATAGATCAAAAGACCACCCCACCCGTCCCCGCGACTGCGCAATCTGCGGCCAATCCTTCGTTGGTTGGTTAGCGTTGAGGAATCACTTAGCTGAGCACTCTACGAGCGGATTTGAGTGTGCTGACTGCGGGAAGGTGTTTAAGTTCCCTCACTCTCTTGCTAAACATCGGGATGTACATAAGGAAAAGACTCTCTCATGCCACCAATGTCCAAAGAAGTTCGGTACTCAAAGCCAGTTGAAGATGCATCAGAAAGTACATGAACGGGCTCAAAGAGGCACTACGTACGCTTGTTCCGTGCCTGGGTGCAGTAAAGCGTTTTACGAAGCTTATAATTTGGCTGTACACGAGAGAACACATAGAAACGAGCGTCCATTTCAGTGTGACATTTGTAACTCTGGTTTTGTTACCAATTCTAGTCTTAAACGGCATAAAAAAGTCTCTCACAGTACATCAAAGCCGTTCGAATGTCCGGTCTGCCGTCGTTCCTTTGTATCAGAAATGATACGAGACAGACACAAGGTGCGCGAACATTCAGATCCAGAGGATTTCAAGTTTGCGTGCGCTCTGTGTGATTGCAAATATACAAAACAAATAAATCTACAAAAACACATGAATAGAGCACATCCTAAAGATAAACCGAAGGACAGTGATAGCGAGTAA
Protein Sequence: MLHNSGPYGPSENPMNVVPPINMPQISTGVDLGQNLSNFNKIAQQTPQMINGQFNIPNYQPYSHSTLNLAPHLNGYSSYNSTTFHNNCSLQNTPSFSDSSWQSNVMPMNLNTHVNRTIETSNFQSDLEKRPQEAIFRNEVTEDCVKERNFPLNVFQRTVNTFQSDINSEKCSMYNINQDKFNHFNQNLDLSTKTQEKPLLDSSKRKSLENTVRLIEDILINTTKNQETNNKETEVKKTEKTNETAKTTQTSTLETEKQNNTDSDSMTTDRTESDVENSNDIQNNENKQKEPSPKHETPEITVKVEVNNDPVPNLNIKMETLYWTDIEYNTPFVRDLNGVMREDVTSDTIVESENSVNEAIAVVKSGLNPKNHYECPYCNLLFDHPKRFLIHTKWHTFGLTYEKRTELARVRETEKNQRKEARFVDRLKSKLATKKTMTDVTFPCKECEKVFLSKSSLKNHRSKDHPTRPRDCAICGQSFVGWLALRNHLAEHSTSGFECADCGKVFKFPHSLAKHRDVHKEKTLSCHQCPKKFGTQSQLKMHQKVHERAQRGTTYACSVPGCSKAFYEAYNLAVHERTHRNERPFQCDICNSGFVTNSSLKRHKKVSHSTSKPFECPVCRRSFVSEMIRDRHKVREHSDPEDFKFACALCDCKYTKQINLQKHMNRAHPKDKPKDSDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -