Basic Information

Insect: Anarsia innoxiella
Gene Symbol: -
Assembly: GCA_947563765.1
Location: OX387418.1:1209989-1214311[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.6 2.3e+02 2.9 0.5 1 19 85 103 85 107 0.86

2 16 0.0038 0.25 12.3 0.1 2 23 130 152 129 152 0.95

3 16 0.00058 0.038 14.8 0.5 1 23 176 198 176 198 0.99

4 16 0.00015 0.0097 16.7 1.4 1 23 202 224 202 224 0.94

5 16 0.59 38 5.4 0.0 2 23 230 252 229 252 0.94

6 16 0.29 19 6.3 1.9 1 23 258 281 258 281 0.95

7 16 0.56 37 5.4 0.1 1 12 287 298 287 299 0.91

8 16 0.061 3.9 8.5 2.7 1 23 360 382 360 382 0.95

9 16 0.027 1.8 9.5 3.2 1 23 449 471 449 471 0.98

10 16 0.0025 0.16 12.8 0.2 3 23 477 497 476 497 0.96

11 16 0.017 1.1 10.2 0.6 1 23 504 527 504 527 0.91

12 16 3.6e-05 0.0023 18.6 1.2 1 23 533 556 533 556 0.98

13 16 0.064 4.1 8.4 1.3 1 23 562 585 562 585 0.95

14 16 0.0025 0.16 12.8 0.2 1 23 591 613 591 613 0.97

15 16 7e-07 4.5e-05 24.0 0.9 1 23 619 641 619 641 0.98

16 16 0.0052 0.34 11.8 7.4 1 23 647 669 647 670 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.6	2.3e+02	2.9	0.5	1	19	85	103	85	107	0.86
2	16	0.0038	0.25	12.3	0.1	2	23	130	152	129	152	0.95
3	16	0.00058	0.038	14.8	0.5	1	23	176	198	176	198	0.99
4	16	0.00015	0.0097	16.7	1.4	1	23	202	224	202	224	0.94
5	16	0.59	38	5.4	0.0	2	23	230	252	229	252	0.94
6	16	0.29	19	6.3	1.9	1	23	258	281	258	281	0.95
7	16	0.56	37	5.4	0.1	1	12	287	298	287	299	0.91
8	16	0.061	3.9	8.5	2.7	1	23	360	382	360	382	0.95
9	16	0.027	1.8	9.5	3.2	1	23	449	471	449	471	0.98
10	16	0.0025	0.16	12.8	0.2	3	23	477	497	476	497	0.96
11	16	0.017	1.1	10.2	0.6	1	23	504	527	504	527	0.91
12	16	3.6e-05	0.0023	18.6	1.2	1	23	533	556	533	556	0.98
13	16	0.064	4.1	8.4	1.3	1	23	562	585	562	585	0.95
14	16	0.0025	0.16	12.8	0.2	1	23	591	613	591	613	0.97
15	16	7e-07	4.5e-05	24.0	0.9	1	23	619	641	619	641	0.98
16	16	0.0052	0.34	11.8	7.4	1	23	647	669	647	670	0.96

Sequence Information

Coding Sequence: ATGAGTCTGTTTTTCTTTCTAGGAATCCTCATCCTGCGAAGGGAAACGGATGAAGTAAATAAAACAGAAGAGAATAAGATCAAATTGCTATGTAGAAGTAGACGGAATACAATAATCATACCGATAGAACGCGAAAGAAGCGGTATTAATGTATGCTGGAAGAAACCTAGAAAAGGCATGTCGGGGAGGGAATCAGCGGCATTTGTCCTTGAAAATTCAAACGCTGTAGTCTTCAAATGGCACAGAGGCAAATACATGTGCGGCTATTGCAGTTACGCGACAACAGAAATGATAGCTCTTAGGGAACACTGCAACGCTCACGATAAAATGACAATTTTTAAAATCCCTAAACTCGTCTTCCCTTTACGGATTGATATCTCAGACCTAACGTGCAATATTTGTAAGGAACGCGTCGAATCCGTCGCGAATTTAAAAGCGCATCTCCAGAATGTACATTCGAAAACTTATTGGTGTCAAACTGGTGATAAAGATGGGGTTATACCATTTATCTTGACGACAAATGATTACAAATGCGCCTTATGTGTGGAAACCTTCTCCAGCTTCATGAGTTTGGTCTTGCACATGAATAAGCATTTCCAGAATTTCGTCTGCCACTTATGCGGCAAAGCATTCTCAGGTGCCTATAAAATGCAACGACACAAAGTCAATCATGAGAAGAACGAAATCGAGTGTCCACAATGTGGTGTAGTTCTACTAAATAAAATCGCTTTAGGTCGCCATTTGGCAACAGCACACGGCCCAAAAAATCGCTACAGGTGCCCCCAATGTGATATACGTTTAGGTTCATGCCACGCCAGGTTGCGACACCTCGAAAGAGTCCACGGCAAAAAGAGCGAATATCCCTGTAATATTTGTGATGCAGTATTCGCGACTGGAGCCATCGAGAAAGACGCCCTCAAAAAGGGAATAGTGAACGAAAGAAAATTAAAGATAAAGATCGAAAATGCAGACCAAGTTTTATGGAAGCCGAAGAAAGTGTTTCAAGATTCAAGAGCGAACGCGTCTGTCATTCTAGAATGTTCTAACGCAACCCCATTTCGTTGGAGGCGTAACGTTTTTAACTGTGCACATTGTAATGAAACGTTCGGTGACTTTTTCGATATGAAACAGCATTCTAAAGAACATCCGGTCAAAGTAGAAGCCTTGAAATTCGTGAGATCTGATTATTTGAAAATAGAAGTCACAGATTTAAAATGTCTGCTTTGCTCAACACCAATGAAAGACGTTAATATTTTAAAAGATCATTTAATTCAAACGCATGATAAGATTTTCAAACAAGATCACAGTATAGGAGTAGTTCCGTACATAATAAACTCAAATGGTTATTATTGCACGTTTTGCGATAATCGATTCGAATTCTTCAATTCTTTGAATACGCATTTAAATCAGCATTATCCTAATAACATTTGCTTTCAATGTGGGAAGTCATTTGTGGCTCAACAAAGACTAACATCACATTTAGCGATCCATGAAAGGTCTGAAGCAAAATTCTCTTGTACGAAATGCGATTTAGTGTTTGCTAGTAGAGTTTTAAAGAATAATCACGTAGCGTACTTCCATAAACAGGAATTGAGATACAAATGTCCGATATGCAAAGAAAGCTTCAAAAGTTATCCGAACAGAATGAAGCATTTGAATCGGGACCACGGAAAGAAGATACAATACGCTTGTCATCTCTGCCCAGCAGTGTTTGCACTGTGCAACCAAAGGACCAAACATATCCAGCTAGTTCACCTTAAAGTAAAGAAATTCTCATGCGATTATTGCGATTACGAGACAGTAACAGCTGCCCAAATCCGACGACACCTCGTCAAACATGTTGGGGATAAGAAATTCGAATGTTCGGTTTGCAAAAAGATGTTTCCGAGAGAAAAATCTTTGAAAGAACACATGCGTATACATAATAATGATAAAAGATTTGTTTGCGTATATTGCAACTATGCGTGTGTACAGAAATGTAGTCTAAAGAGTCATTTAAAGACGCACCATAGTCATTTAATACAAGGATTGAGTAATTTAGATGAATTATGTGCAAGTAAAAAGGATTCTGTATTGAATACTAATGACACACGGCAATAA
Protein Sequence: MSLFFFLGILILRRETDEVNKTEENKIKLLCRSRRNTIIIPIERERSGINVCWKKPRKGMSGRESAAFVLENSNAVVFKWHRGKYMCGYCSYATTEMIALREHCNAHDKMTIFKIPKLVFPLRIDISDLTCNICKERVESVANLKAHLQNVHSKTYWCQTGDKDGVIPFILTTNDYKCALCVETFSSFMSLVLHMNKHFQNFVCHLCGKAFSGAYKMQRHKVNHEKNEIECPQCGVVLLNKIALGRHLATAHGPKNRYRCPQCDIRLGSCHARLRHLERVHGKKSEYPCNICDAVFATGAIEKDALKKGIVNERKLKIKIENADQVLWKPKKVFQDSRANASVILECSNATPFRWRRNVFNCAHCNETFGDFFDMKQHSKEHPVKVEALKFVRSDYLKIEVTDLKCLLCSTPMKDVNILKDHLIQTHDKIFKQDHSIGVVPYIINSNGYYCTFCDNRFEFFNSLNTHLNQHYPNNICFQCGKSFVAQQRLTSHLAIHERSEAKFSCTKCDLVFASRVLKNNHVAYFHKQELRYKCPICKESFKSYPNRMKHLNRDHGKKIQYACHLCPAVFALCNQRTKHIQLVHLKVKKFSCDYCDYETVTAAQIRRHLVKHVGDKKFECSVCKKMFPREKSLKEHMRIHNNDKRFVCVYCNYACVQKCSLKSHLKTHHSHLIQGLSNLDELCASKKDSVLNTNDTRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -