Basic Information

Insect: Anarsia innoxiella
Gene Symbol: -
Assembly: GCA_947563765.1
Location: OX387400.1:8782543-8794370[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0007 0.045 14.6 2.6 1 23 285 307 285 307 0.99

2 11 0.002 0.13 13.1 4.8 1 23 314 337 314 337 0.98

3 11 8.4e-06 0.00054 20.6 0.2 1 23 368 391 368 391 0.97

4 11 0.078 5.1 8.1 0.4 2 23 396 418 395 418 0.92

5 11 0.02 1.3 9.9 0.1 2 20 429 447 429 449 0.95

6 11 1.1e-05 0.00069 20.3 0.2 3 23 461 481 461 481 0.99

7 11 0.4 26 5.9 0.3 3 23 499 520 498 520 0.95

8 11 0.00013 0.0086 16.8 4.1 2 23 537 558 536 558 0.96

9 11 2.2e-06 0.00014 22.4 0.8 1 23 564 586 564 586 0.98

10 11 1.3e-05 0.00086 20.0 0.3 1 23 592 614 592 614 0.97

11 11 0.00022 0.014 16.2 6.1 1 23 620 643 620 644 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0007	0.045	14.6	2.6	1	23	285	307	285	307	0.99
2	11	0.002	0.13	13.1	4.8	1	23	314	337	314	337	0.98
3	11	8.4e-06	0.00054	20.6	0.2	1	23	368	391	368	391	0.97
4	11	0.078	5.1	8.1	0.4	2	23	396	418	395	418	0.92
5	11	0.02	1.3	9.9	0.1	2	20	429	447	429	449	0.95
6	11	1.1e-05	0.00069	20.3	0.2	3	23	461	481	461	481	0.99
7	11	0.4	26	5.9	0.3	3	23	499	520	498	520	0.95
8	11	0.00013	0.0086	16.8	4.1	2	23	537	558	536	558	0.96
9	11	2.2e-06	0.00014	22.4	0.8	1	23	564	586	564	586	0.98
10	11	1.3e-05	0.00086	20.0	0.3	1	23	592	614	592	614	0.97
11	11	0.00022	0.014	16.2	6.1	1	23	620	643	620	644	0.96

Sequence Information

Coding Sequence: ATGGACGATCAAAAATTCTGTAAGATTTGTTTGTGTACTGATACAAAAATGTACAGTTTAAGCTTCGCGAATCTTGGTGAAGTGTATTTGCAACTTTTGCAGGTTTCTGATACCAAAATACACCTTTCATTTGTGTGCTTTGAATGTGCAAGTTTATTACAAAAGTTCAATGAATTTTATGTAAAATGTAAAACTGCATATCGAATTCTTAGTTGTATACAATCAGATCATTCTCAGATATCAAAAACATCAGTGAAACAAATTAATAGAAAAGTATATAATTTAGAATCTAAATTATCCATTTATTCTCCCAATGAAAGCAATGAACAAATTCTATTCCAAGAAGACATTGAATTGGATAATAAATTAATAGACATTATCAAAGAAGAAGAAAAAGCTGATTATTTTGAAATTGTCGAAGTTAAAAGTGATAAAGAAATTGAATTTAACGAAGAAATCTGCACAAAAGAAGCATCGATTATTCCAATACATTCAACTAAGAAAAGAAAACAAATGAATAACACCAAAAAAGTAAAAACAAAAAACCTGATACGAAAAAAAGTTAAAAAGATTGTTGAAAATTACCACGAAGACAACGACTACGTAGACGATACTTTTGCAGATTCTGAAGATGAAATAGTAATATCTAAATTAAAAACCGTGCAAAAAGATTTTAATAATGAAACAAATGAACAGACAATTGAATTGAAAGAAAAAGTTAGAAAAAAGTCCGGACCTAAAATTGACGAAAGTTTCTTCACAGATCATGCTATTGTAACATTTTTGTCTGCTGAAGAGGCAAGACAAGAGGTTCTATTACGAAAAGAGTCAAACAATTATAAGAGTTGTCCGTACAAATGTGAATATTGTTTTAGAGGGTATGAAGTTCAACGGACTTTTGAGAATCATATGAAAAAACATAGTAAGGATTACGGTCAATTTGAATGTGAATTCTGCCATCTTATGTTTCCATCTCAAAGATTCTTAAAGCAACATATACTTACATGTCATACTAGGAAATATAATTGCAAGAAATGCTCATTTATTTGTTATTCCAAGCATCAAGCAAAACAGCATGTAAGCTTCCACAAAGGGAGGAAGTACCCGTGTGAGGAATGTGGAAAAGTATTTAGTATGCCAAACACATTGTCGATGCACAAACGAGTGAAACATTCGACGGAGTGTCCGTGTGACTTGTGCGGTAGTATGTTTGGGACGGAACGAGGGCTGGCTACACACAAGAACTTGCTGCATAAACATGAAAATAATGAAGGAAAGGGCCCTAAATGTGAAGAGTGCGGTGTACAGTTTTCTACAGATAATGCCTGGAGGAGACATTTGGTGCTTTCGTCGAGTCATAAAATTAAAATTAGTAACGGCTGCGAAATATGTGGTGAATCATTCCCGGATAAGGAATCATTGAAGGAGCATACAAAGTCACACAGTAGGAATAGAATGATAGATGAATCTCATAAAAGGAAATATCCATCTGCTTGTACTATGTGTGCAACGTTACTGGCAAGCCGCAAAGACTATAAAAACCACATGATGTCAGAGCATCCCAACACAAGAGTAGCTAAGAAAATCGCTGAAGATCAGACGAGGTGTGTTTGTGAAGTTTGCGGCAAGAATTTTAAGAAACAATACTTCCTAAAGTACCACAAGCGGATACACACTGGCGAGCGACCGCACCAATGCAGGCAATGCGGGAAAGCGTTTACATTCCCCGGCGCACTATCCGAACATATGAACACGCATACAAAGACGCGAGTGTACCAGTGCCATATGTGCGAGAAGGGGTTCGCTAATCGAGGGGCGCTTGTTAAACATGTTAATGCCCACCTAGGAATCAGGCCACACAAATGTCCGATCTGCGAGAAAGCGTTCCCAAACCCGTGCCACGTTAAAACTCATATGAAATACGTACATCATAAGGAACCTTGGCCCAAGAGAGATCGGAGCAAGAGGACTGTTAAATAA
Protein Sequence: MDDQKFCKICLCTDTKMYSLSFANLGEVYLQLLQVSDTKIHLSFVCFECASLLQKFNEFYVKCKTAYRILSCIQSDHSQISKTSVKQINRKVYNLESKLSIYSPNESNEQILFQEDIELDNKLIDIIKEEEKADYFEIVEVKSDKEIEFNEEICTKEASIIPIHSTKKRKQMNNTKKVKTKNLIRKKVKKIVENYHEDNDYVDDTFADSEDEIVISKLKTVQKDFNNETNEQTIELKEKVRKKSGPKIDESFFTDHAIVTFLSAEEARQEVLLRKESNNYKSCPYKCEYCFRGYEVQRTFENHMKKHSKDYGQFECEFCHLMFPSQRFLKQHILTCHTRKYNCKKCSFICYSKHQAKQHVSFHKGRKYPCEECGKVFSMPNTLSMHKRVKHSTECPCDLCGSMFGTERGLATHKNLLHKHENNEGKGPKCEECGVQFSTDNAWRRHLVLSSSHKIKISNGCEICGESFPDKESLKEHTKSHSRNRMIDESHKRKYPSACTMCATLLASRKDYKNHMMSEHPNTRVAKKIAEDQTRCVCEVCGKNFKKQYFLKYHKRIHTGERPHQCRQCGKAFTFPGALSEHMNTHTKTRVYQCHMCEKGFANRGALVKHVNAHLGIRPHKCPICEKAFPNPCHVKTHMKYVHHKEPWPKRDRSKRTVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -