Basic Information

Insect: Anarsia innoxiella
Gene Symbol: -
Assembly: GCA_947563765.1
Location: OX387417.1:803118-831366[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.21 13 6.8 4.0 1 20 78 97 78 99 0.93

2 18 0.028 1.8 9.5 3.8 2 23 137 158 136 158 0.95

3 18 1.1 69 4.6 3.9 1 23 170 194 170 195 0.91

4 18 0.00019 0.012 16.3 0.4 2 23 201 224 200 224 0.96

5 18 0.028 1.8 9.5 0.2 1 23 230 252 230 252 0.93

6 18 0.0017 0.11 13.4 3.3 1 23 258 280 258 280 0.98

7 18 0.13 8.2 7.5 0.0 2 20 291 309 290 311 0.91

8 18 0.039 2.5 9.1 0.2 1 23 406 428 406 428 0.96

9 18 1.6 1e+02 4.0 7.2 1 23 435 457 435 457 0.95

10 18 0.0011 0.069 14.0 1.8 1 23 497 520 497 520 0.95

11 18 0.00012 0.0075 17.0 1.8 1 23 527 550 527 550 0.98

12 18 0.003 0.19 12.6 0.2 2 23 573 595 572 595 0.96

13 18 3.2e-05 0.002 18.8 0.2 3 23 613 633 611 633 0.98

14 18 0.024 1.6 9.7 0.9 2 23 658 680 658 680 0.95

15 18 1.1e-05 0.00072 20.2 3.2 1 23 686 708 686 708 0.99

16 18 5.1e-05 0.0033 18.2 1.1 1 23 714 736 714 736 0.96

17 18 9.4e-05 0.0061 17.3 0.1 1 23 742 764 742 764 0.97

18 18 0.0015 0.097 13.5 1.6 3 23 772 793 772 793 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.21	13	6.8	4.0	1	20	78	97	78	99	0.93
2	18	0.028	1.8	9.5	3.8	2	23	137	158	136	158	0.95
3	18	1.1	69	4.6	3.9	1	23	170	194	170	195	0.91
4	18	0.00019	0.012	16.3	0.4	2	23	201	224	200	224	0.96
5	18	0.028	1.8	9.5	0.2	1	23	230	252	230	252	0.93
6	18	0.0017	0.11	13.4	3.3	1	23	258	280	258	280	0.98
7	18	0.13	8.2	7.5	0.0	2	20	291	309	290	311	0.91
8	18	0.039	2.5	9.1	0.2	1	23	406	428	406	428	0.96
9	18	1.6	1e+02	4.0	7.2	1	23	435	457	435	457	0.95
10	18	0.0011	0.069	14.0	1.8	1	23	497	520	497	520	0.95
11	18	0.00012	0.0075	17.0	1.8	1	23	527	550	527	550	0.98
12	18	0.003	0.19	12.6	0.2	2	23	573	595	572	595	0.96
13	18	3.2e-05	0.002	18.8	0.2	3	23	613	633	611	633	0.98
14	18	0.024	1.6	9.7	0.9	2	23	658	680	658	680	0.95
15	18	1.1e-05	0.00072	20.2	3.2	1	23	686	708	686	708	0.99
16	18	5.1e-05	0.0033	18.2	1.1	1	23	714	736	714	736	0.96
17	18	9.4e-05	0.0061	17.3	0.1	1	23	742	764	742	764	0.97
18	18	0.0015	0.097	13.5	1.6	3	23	772	793	772	793	0.96

Sequence Information

Coding Sequence: ATGAACCTTCGCCTATTGCAAGCAGAACGAGAAGTGCGAACAAGACCAATGGTGACTGTAAAGAAAGGATTCGTAATAAAAACAGAAGTGAAACAGGAAACTCTGGACACCAGTGAAGAAGTAAGTGATGATGAAGTCTGGATCGTGGCGATGGCTGATGAAGAGTCTGATCAGCAGTTGAAGAAACTGCTCACTATTAAGAATGAAACAACTTCAAATGGGACTAAAAAACATCGCTGTGATAATTGCAGCCGAGTATTTATATCAGCCCAATGTCTGGAACTACATAAATGTAATCGTCGCGGACGCAAGAAAAACGGCAAAGAAGATGGCTCTTCTAAAGATGACTTTGTTAAGCGACCTCGAAAGAGAAAGAACAAAGAGCCTACTTCAGATCCTCAAATTGTAACATGTCATAATTGTAACGAGTCATTCACGTCGAAAGTGCGACTAAAGTTTCATATGCAATTCCACGACGCGACCAACATGCTGACAGCATCAGGCCAGTACAAATGTACGGAATGTACCGACACCACGTTTAGTACGGAGACGGCGTTGTTCGACCACGTACACTTCCAACATCACAAACAGAGGAGGTGGCAGTGTAACGTCGCTGGCTGCGGGAAGACGTTCTATCTGAGGGCAACTCTAACAAAACACAGTAGGAGCCACACCGACACGCGTCGCTACGTGTGCGGTACGTGCGGGAAGCGGTTCCTGGACAAGCAGACGCTGGACGAACATGGAGTCACACATTTACAGATAAAACCCTTCCAATGTCACATATGCCTGAAGCAGCTAACTCGAAGATCCCGTCTCCGGATGCATCTTAGAGCTCATGAGGAAGAGCTCTGTCCACGCCTGGTGCTGGTCTGCGCTGTGTGCTCCAGGGCTTTTAGAGATGAGAACGATGTACAGGATCACCTAACAAGGTTCCCGGAATGCATAGAAGAGTATGCGAGCGAACTTAAAGAGGAAGAGACTGTGTCTGTCCAACTGTCGCCCACTAGTGGCCTTGTTAGACATACTGTGCAAATTGTCGGCAACCTTAGGGTAAGTAATAGCGAGAATGTATTTGACCCCCGGCCCGTAGAGTCCCCGAAGCAGGCAGCAGGCGGCGCGTGGTGGGGCGCGGGCGGCGCGGCGGACGCGCTGCTGCGGCGGGTGGCGGACGAGGCGCGCGCTATCATACGCGTCGTCGAGATAGAGAAGGCCTTCCGCTGCGAGTTCTGTGAGGATGTATTCTACTCAGAAGATGGCTTGAACAACCACCGCGTCATTCACAAAGGTGTAAAGAACCCCTTTACGTGTCACATTTGTAAAGTTAGCTTCGCTACGTATTCAAGATGCACAACCCACAAAACAACGCACGGCTTCTACAAGCGTTCCCTAGCCGACGTGAAGAAGCAGACAGACTCCACCAAGCAGGAGGCAGGACCTTCATCTACCGGCATCTTGGGCTACGGAGACTTTCCGGTCGTCAAGCATTTCCTGTGCGAGGATTGTGGCAGGTCCTACCTCCATTGGACATACCTACAAGTGCATCGTCGAATGAAGCACGCAAACGAAAACTTTTTGTACAAGTGCAGTCAATGTGACATGTCTTTTCCTAACAGTTGGAGCCTATCCTACCATAGAAAGAAAACACACGGCAAAACTGAACAAGATGAGAATAATGCTAATAAAGCAGCAAAGGAACATAATGATTACAAAATACCATGTAGAGACTGCGATGAAGTGCTGCCAAACAAAACAGCTCTTTATAAACACAGGAAGAAAGAACATAGTGATATGTCACTGCGAGGCAACAATAAACTTGGAAATGGAGTATTTTGGTGTGGCGTCTGCGGTCGTCGCTACACGACCAGAGCTGGTCTCGAAGCTCACCGTCGCACACACCCTCCTGACACTTCCACCTCCATACTCCAAGGAAACCAGGTCCAAGATCATCAGCAAGCACCGGCGGTGGCTAAGTGCGCTAAGTGCGACAATACATTCCCGCATGTGGCGGCTTTGCATGCGCATTTAAAAGAAGTCCACAGCCACGAGCTAGACTTCCAATGCGAGGTGTGCAAGAAAACCTTCTGTTCGCGCACGGAGCTGTCCGTACATGCGCGCACGCACACGGCTGCTCGTGCGCACGCGTGCAGTGTATGCGGGCATGCTTTCCGCACGCTGTCCATGCTGACGGAGCACGCTAGGGTGCATACGGGGGAGCGGCCGTTTCCTTGTGACGTTTGTGGGGTTGCTTTTCGCAGATCTACAGCAATGCGCAACCACCGTCTGATCCACTCGGGTGTCCGCGCGTGGGGCTGCGCGCGCTGCCCCAAACGGTTCCGCATCCGGTCAGATCTGCGCACGCACTTGAGGCTGAAACATCCGGCTAGGCTGGTTGTTATTGAGGTAGCCGGATTGAACCCCACGCCGGAAGAAGTGATGGCCCGGTTGACTGCCAACAACATAGCCCATGATAAAGTCATTGAAATTACTAAGATTGCTTTTCCTAAGGGTACTTCAAGTATAGTCCCGAACTGTTCCCGCGCTCTGGACATGTTATCTCACGTACCTCGCGCACAGGTTGCCTGTAGTCGAACGCGGCCGGATTTGTCCTTCGACATGTTCCAACCAGCGCGCCGCGGACGAGGCATCGCCAAGAACCCGCGGAAACCGAAGATACTGCAGCGTGTGGGAGAGCAGGGGGAGCCTATTTATAGCTTGACTTTGTGTCCTGAGCAAATTCAACAAGCTACCCAATCAGACCAGAGTCAGCCAACGACGTCACAAGACCAAGCCGCTTATCCGATAGCGTTAAATGTTACTGGAGAGCCGTTATTGTCCTACTGCTGGGCAAAGGCTCTCCTCTCTCCTCCCCCTCCACGATTCCCTATCCTGAGCCGCCTCTGCCCAGTCGTTCGTGAAGGTGTCCAGTTCATCTCGCCACCTTTTCCGTGGTCTGCCGCGAGGTCTTTTGGCGGTTGGTTGCCATTGGGTAGTTGTGATTGCCCAGAGATCGTTCGGCATGCGGCAGACGTGACCGGCCCAATCCCACTTTAG
Protein Sequence: MNLRLLQAEREVRTRPMVTVKKGFVIKTEVKQETLDTSEEVSDDEVWIVAMADEESDQQLKKLLTIKNETTSNGTKKHRCDNCSRVFISAQCLELHKCNRRGRKKNGKEDGSSKDDFVKRPRKRKNKEPTSDPQIVTCHNCNESFTSKVRLKFHMQFHDATNMLTASGQYKCTECTDTTFSTETALFDHVHFQHHKQRRWQCNVAGCGKTFYLRATLTKHSRSHTDTRRYVCGTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELCPRLVLVCAVCSRAFRDENDVQDHLTRFPECIEEYASELKEEETVSVQLSPTSGLVRHTVQIVGNLRVSNSENVFDPRPVESPKQAAGGAWWGAGGAADALLRRVADEARAIIRVVEIEKAFRCEFCEDVFYSEDGLNNHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADVKKQTDSTKQEAGPSSTGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCSQCDMSFPNSWSLSYHRKKTHGKTEQDENNANKAAKEHNDYKIPCRDCDEVLPNKTALYKHRKKEHSDMSLRGNNKLGNGVFWCGVCGRRYTTRAGLEAHRRTHPPDTSTSILQGNQVQDHQQAPAVAKCAKCDNTFPHVAALHAHLKEVHSHELDFQCEVCKKTFCSRTELSVHARTHTAARAHACSVCGHAFRTLSMLTEHARVHTGERPFPCDVCGVAFRRSTAMRNHRLIHSGVRAWGCARCPKRFRIRSDLRTHLRLKHPARLVVIEVAGLNPTPEEVMARLTANNIAHDKVIEITKIAFPKGTSSIVPNCSRALDMLSHVPRAQVACSRTRPDLSFDMFQPARRGRGIAKNPRKPKILQRVGEQGEPIYSLTLCPEQIQQATQSDQSQPTTSQDQAAYPIALNVTGEPLLSYCWAKALLSPPPPRFPILSRLCPVVREGVQFISPPFPWSAARSFGGWLPLGSCDCPEIVRHAADVTGPIPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -