Ainn009198.1
Basic Information
- Insect
- Anarsia innoxiella
- Gene Symbol
- bre-4
- Assembly
- GCA_947563765.1
- Location
- OX387416.1:964765-986320[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.78 50 5.0 0.5 6 21 569 584 566 585 0.91 2 12 0.0077 0.5 11.3 0.3 1 23 947 969 947 969 0.96 3 12 0.00041 0.027 15.3 4.7 1 23 987 1009 987 1009 0.97 4 12 0.00029 0.019 15.8 2.7 1 23 1015 1037 1015 1037 0.98 5 12 1.1e-06 7.1e-05 23.4 3.7 1 23 1044 1066 1044 1066 0.99 6 12 3.7e-05 0.0024 18.6 0.4 1 23 1072 1094 1072 1094 0.93 7 12 3.2e-06 0.00021 21.9 0.0 1 23 1100 1122 1100 1122 0.98 8 12 4.6e-06 0.0003 21.4 1.1 1 23 1128 1151 1128 1151 0.96 9 12 0.0003 0.02 15.7 3.7 1 23 1157 1180 1157 1180 0.96 10 12 5.1e-05 0.0033 18.1 0.4 2 23 1187 1208 1186 1208 0.97 11 12 3e-05 0.0019 18.9 1.0 1 23 1214 1236 1214 1236 0.97 12 12 0.0099 0.64 10.9 0.1 1 23 1242 1266 1242 1266 0.94
Sequence Information
- Coding Sequence
- ATGGTGTTCGGCGTGTTTGCAGAACCCCCTGTAGATAATAGATACCTCCCTCCCCAACAAGGGGGATTTGGGCCCTCACAATCATATGGGGCCCCCAGCGCAGGGCCACAAAGACAAACTGATGCAGTTTTCAGAGGCCGACCATCTTCAGACTACGGAGCGCCGGCAAATGGCCGCCAAAGTAACCAAAATGGCCGACAGCCGTCAAATCAATACGGACCACCGAGATCTCAACCTCAAAACCAGTACATACCTCCTTCAAATTCATATAACGCGCCTTTAAATCAACCTTCGAACCAATATGGCGCCCCTTCATTCCAATCTGGGCAATCAAATCGCCAATCCATCGCACCAGCAAATGAATACCTGCCGCCGTCAAATGCACCTTCGAACCAGTATGGTCCTCCAGGCCAGGGTAGAAACGGGTTCGGGTCAGGTGACTTGAATGCTCCTTCTCAACAATATGGATCGCCTAATGCGGGAGCTGAAGGTAACCAACAATTCGGTGGAGCTCAAAGACAGTATCTACCCCCCGGAGGTGGAAGGGGGGGCTACGGTGGTGGAGGCAATGACGATGGTAGCAATGGGGAGCCAGCGAACTACAGTTTCGAATACATGGTGAAAGATGACGAATCTGGCAACGATTTTGGACATCGCGAGTCTAGGATGGGTGAACGTGCTGAGGGACTCTACTATGTGCTGTTACCTGATGGGAGAAAGCAAACTGTTGAGTACGTAGCAGATCAAGATGGCTACAGACCGAAGACTTCGTACGAAGATACCGGCGCCGGCGCAAGTGGGGGCTACGATAGCAATAGTCAAGGCAGGCAAGAACGTTATGAAAAACTTCACGCATTCTATAAACCAATAGCAAAACTACCGAAGTGCAATTATTTGAAAATCTTACCAAGTAATGAAATAAAAACCAACAGTGATCAAATATCAAAATCACAAATTGAAACAAGAAAGTTACTAAAAGGTAGTTTTTCACCAGCAACTTGCAACCCTCAATTCAGTGTTGCCATAATAGCACCGTACAGAAACAGATCTACCCATTTGGAAATATTTCTCTCCTATATGCACAATTTTTTAAGTAGACAGGATATTCATTTTAAAATATACATCGTAGAACTTCAAGATGACTTCCCATTTAACAGAGGTTTTCTTTTAAACGTGGGAGCGAGACAAGCTATGAAAGATCTGTATCCTTGTCTTATTCTACACGATATAAGTTTGTTGCCTCTAGAGTATAATAATTTATACGTTTGCACTACACAACCGAGGCATATGAGTGTCAAGTTGGATGCGTTTAGAAATAAGTTACTTTACAATCAACTATGTGGCGGTGCCATCGCAATCAGATCCAATCAGTTTATGTTACTTAATGGATATTCTAACAAATTCGATTTTTGGGGTGGAGAAGATGATGATTTGTACCAGAGAATGCGAGAAAAACGTTTTCATTTAATTAGGTACCCTCCACACATGGCGCACTACAAAGCCTTGATTCATCCGCCACAGGTCAAAAACAAGAAGCGTTTTAGAATAATTCGAGAAAACAAACGAACGGGGCGATCCGAAGATGGAATTAGTTCTTTAGACGAGTATATTGAAAAGCAAAATCTGAACAGAAGATTGCCAGATATCTTATCAGAAATATTTGACAGGAAACTGCCAGAAACTGGTTTGCATTCCACTGTGCTATGTGTGAAGTGCTTTAAAACATGTGTGGACTATGAAAATCACCAAGAAAAAATAAAACAAATAAAAACCCAATTACTAAACAGCTTTAAGGAAACATTACCGAAACATGGACAGACTTTCACGAATTACCCAAAAAAATCTTTAAAACCACTAGTAGTGCCAGCTTCTAAACTACAACCTCTACCACCGAACTACGTCATCAATGTTGCCGGTTTAACGAAATTGAGTCCTACCAAAGTTAATTTGGGGAAAGATGGTAAACCAAATTTCCAAAACCTGAACATAAACGCAAGTACATCACTTCTGACTCAAAATGCTAAAGTTGTGCCAAAGCCTGCAACAAAAAGCAATATAAGTACAGTGACATCAAATTCTAATATTATAATTACAAATGTAGAGTCTATAAAGAAGGAAAATTCATTTGTTAAGATCAAATGTGAAGATAATTTAAAAGAAGATAGTTCTATGGAGATTGATGGAGATAATACTGAAGAGCAAGAAACAAAAACTGACTCGAATGGTGAAAGTATGGAGGACAAGCAAATTCAAAAACAAGAGAAATCTCATTACTTTGATGTGAGTCTGCTGTCAGAGGGCGCCACTAACGATACTATATTGGGGAAGTTGGAAATATTAGATCAAAGCGGGGATGATgaaaatgacgAGAGTGAAACAATAGTGATGACAGGCGAGAACGGATCAATACTACGTATAATGTCTGGAAAGAAACTTGTATATGAGAATGGAGAGATTACTTTAGCGTCAGACGATGAGAATTCTAACGATAATCAGGATAATGTGAATGATGGGCAAGATTCAAACGACGAATCCCAAATAGAATTACAAGTGTCAGGTGACGAAGAAACTGCAAACGCTATAATCGCGGCGGCGCAAGAGCAAGGTGGTGCATTTATAAAAGTGGGTACAGGCGAAATGTTTAGAGTGCAATCAGTTCATAGTAAATCTGGAGATGTGACTGAAGATACTGCTAATACGATGGTAGCACAAACATCGCCAGGCAGTTCTACTTTCAAATGCCTGCTTTGTGAAAAAAGCGAGCAAAATCCAAAATCGATAACTGGCGACCCAAATTCAATGATGCAACATATAAAGTTAGTACATGCAGCTAGATTGTACATTTGTGAGTTGTGTCGTAAGGTAATGAGGCGAAGGAGTGAATATACTGCTCATTTAGAGGAGCATTCAATGGCGATGAGCAATGCTACAGGAAGCGTGGAAGTGAAAACTAAACTGCACGAATGTACCTTATGTCATAAGAAATACAATTCCCGTACGTTGCTACAAGAACACATGAACATACACAACGGTACGCGTCCATACAGCTGCAATATTTGCAACAAAGCATTCGCCTCAAAGTACACGCATCAAGCGCATCTCAAAACGCATCTGGAACGACCGCGCCCGTTCAAATGCAACCAATGTCCAAAATCGTTCTTCACGCAACAAAACCTGAACCAGCATCAGAAGACACATCTAGGAATCAAGGATTTCGTCTGTAATACTTGCGGCAAAGCATTCGGTAGTCAACATAACTTGGAGGTTCACTCGGTGGTCCATTCGGGGAAGAAAGCGTTTGTGTGTGGGGTCTGCGGGAAGGGATTCGCGAGGAAAGCTGAGGTTAAAGATCATATGAGGATACATACTGGTGAGCGTCCATACACCTGCGATATCTGCGGCGCGGCGTTCTCGCAGCGATCCAACCTACACTCACACAAACGTGCGACACATTTAGATGACAGAAGATACCACTGTACTGAGTGCCCTAAGAAGTTTAAACGGAGGAGACTCCTAGACTACCATATGAAGGCGTCCCACACTGGCGTGCGTCCGCTAGTGTGCGAGGTGTGCCAAGCGTCGTTCGTGTACCCGGAGCATTACAAGAAACATATTCGGATCCATAGCGGGGAGAAACCTTATGTCTGTGAGGTGTGCGGCAAGTCGTTCAACTCTCGCGACAACCGCAACACGCACCGGTTCGTGCACAGCGACAAGAAGCCGTACGAGTGTCTCGTGTGCGGCAGCGGGTACATGCGGAAACAGCTGCTCTATGCGCATATGAACACCAGCGGTCACATTGCGGAATCGATTGTGGTCAATCAACCGAGAGTGCAAAATATTAAACCGAAAGCCAAAACTACATCGGGCACAGAATATGCGGATATGCATTAA
- Protein Sequence
- MVFGVFAEPPVDNRYLPPQQGGFGPSQSYGAPSAGPQRQTDAVFRGRPSSDYGAPANGRQSNQNGRQPSNQYGPPRSQPQNQYIPPSNSYNAPLNQPSNQYGAPSFQSGQSNRQSIAPANEYLPPSNAPSNQYGPPGQGRNGFGSGDLNAPSQQYGSPNAGAEGNQQFGGAQRQYLPPGGGRGGYGGGGNDDGSNGEPANYSFEYMVKDDESGNDFGHRESRMGERAEGLYYVLLPDGRKQTVEYVADQDGYRPKTSYEDTGAGASGGYDSNSQGRQERYEKLHAFYKPIAKLPKCNYLKILPSNEIKTNSDQISKSQIETRKLLKGSFSPATCNPQFSVAIIAPYRNRSTHLEIFLSYMHNFLSRQDIHFKIYIVELQDDFPFNRGFLLNVGARQAMKDLYPCLILHDISLLPLEYNNLYVCTTQPRHMSVKLDAFRNKLLYNQLCGGAIAIRSNQFMLLNGYSNKFDFWGGEDDDLYQRMREKRFHLIRYPPHMAHYKALIHPPQVKNKKRFRIIRENKRTGRSEDGISSLDEYIEKQNLNRRLPDILSEIFDRKLPETGLHSTVLCVKCFKTCVDYENHQEKIKQIKTQLLNSFKETLPKHGQTFTNYPKKSLKPLVVPASKLQPLPPNYVINVAGLTKLSPTKVNLGKDGKPNFQNLNINASTSLLTQNAKVVPKPATKSNISTVTSNSNIIITNVESIKKENSFVKIKCEDNLKEDSSMEIDGDNTEEQETKTDSNGESMEDKQIQKQEKSHYFDVSLLSEGATNDTILGKLEILDQSGDDENDESETIVMTGENGSILRIMSGKKLVYENGEITLASDDENSNDNQDNVNDGQDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVGTGEMFRVQSVHSKSGDVTEDTANTMVAQTSPGSSTFKCLLCEKSEQNPKSITGDPNSMMQHIKLVHAARLYICELCRKVMRRRSEYTAHLEEHSMAMSNATGSVEVKTKLHECTLCHKKYNSRTLLQEHMNIHNGTRPYSCNICNKAFASKYTHQAHLKTHLERPRPFKCNQCPKSFFTQQNLNQHQKTHLGIKDFVCNTCGKAFGSQHNLEVHSVVHSGKKAFVCGVCGKGFARKAEVKDHMRIHTGERPYTCDICGAAFSQRSNLHSHKRATHLDDRRYHCTECPKKFKRRRLLDYHMKASHTGVRPLVCEVCQASFVYPEHYKKHIRIHSGEKPYVCEVCGKSFNSRDNRNTHRFVHSDKKPYECLVCGSGYMRKQLLYAHMNTSGHIAESIVVNQPRVQNIKPKAKTTSGTEYADMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -