Ainn020508.1
Basic Information
- Insect
- Anarsia innoxiella
- Gene Symbol
- -
- Assembly
- GCA_947563765.1
- Location
- OX387419.1:3858735-3861134[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 4.4e-06 0.00028 21.5 4.2 1 23 10 33 10 33 0.95 2 21 0.00055 0.035 14.9 0.3 2 23 39 61 38 61 0.94 3 21 5.1e-07 3.3e-05 24.4 1.6 2 23 70 92 70 92 0.97 4 21 0.00019 0.012 16.3 2.9 3 23 102 122 100 122 0.95 5 21 7e-06 0.00045 20.9 0.6 2 23 130 152 129 152 0.94 6 21 4e-06 0.00026 21.6 0.5 2 23 160 182 159 182 0.95 7 21 2.8e-06 0.00018 22.1 0.9 1 23 188 211 188 211 0.96 8 21 1.1 74 4.5 0.9 2 23 220 242 219 242 0.92 9 21 0.0015 0.098 13.5 0.1 1 23 264 287 264 287 0.97 10 21 0.00014 0.0092 16.7 0.6 1 23 320 343 320 343 0.97 11 21 0.019 1.2 10.1 2.2 2 23 380 402 380 402 0.95 12 21 0.0049 0.32 11.9 6.4 1 23 425 448 425 448 0.97 13 21 4.6e-05 0.003 18.3 0.5 2 23 455 477 454 477 0.96 14 21 3.3e-05 0.0021 18.7 2.2 2 23 484 506 483 506 0.94 15 21 0.0077 0.5 11.3 2.2 1 23 512 535 512 535 0.97 16 21 1.6 1.1e+02 4.0 5.8 2 23 543 565 543 565 0.95 17 21 0.0002 0.013 16.3 0.1 1 23 572 595 572 595 0.98 18 21 0.027 1.7 9.6 3.1 1 23 602 625 602 625 0.92 19 21 0.018 1.2 10.1 2.7 3 23 640 661 639 661 0.91 20 21 9.9 6.4e+02 1.5 0.2 2 12 682 692 681 697 0.85 21 21 0.94 61 4.7 0.2 1 13 711 723 711 726 0.90
Sequence Information
- Coding Sequence
- ATGTTTCACACATTCAACACCTTAGACTTTGTCTGTGACTATTGCAGTCGCACGTTTACAAGAAAATATAATCTTCAAACGCACATAGAAAACTGCCATATTAACTCTTCTTGTTCTTGCGAAATTTGCGGACAAAACTTTGGCAGCCCTGCTGGGTTGCAACAGCATTATACCAGGGGACATAACAGATTCGACCAGCCGTTCCCAGAATGCGACCATTGCGGTCGTATTTTCACAAGAAAACAAAACCTCACCTCCCATATGATAACAGTTCACCTACAAGGCGTAGGACCAAAAATCTGTTGTACTATATGCAATAAGAATTTCAATTCAGAACGAAGTTTGAGGCGACATGTTCAGTTGCATAATTCAGATGTCGAAAATTTAACTTGCGATGAGTGCCATCGAGTATTCAAAGGTAAAAGCTCGTTGAAAGCACATATTCAAGCTGCACATCTGTCAGAAAAAAGACAAACGCAATGCCCTCTTTGCGATAAAGTTTATACGAACTATAGAAACTTGAAAAGACACGTAGAGATGTTACACGGAGAAAAGGAAGAGTTTAAATGTGATATTTGTCCGAAAGTTTACACCTCTAATCAAAGTTTAAGGCGACACTCCCGTAATGCTCATGTTTCTGATGATCAAGATGAGTTAACATGCGATTTTTGCTCAAAAGTCATACTTGGTAAAGATAATCTTGAAACGCACATTCATTACTTCCACAAAGAAGAGAACGGTGATGTCGAATCGATACAAGAACTACCAGAAGATGACCAACAGTACAATTTTGCTTGCGAAAACTGCGATAGCTACTTCATTGATGAACCAAGTTTAAGGCAGCATATAAAAACTGACCACTCATTCAATACTTTTTACAAATATTGTAAAGATTCTCTCTTAAAACAGATGGAAGACAAACCGGTATCCGAATCACCTAAACGACAAGACTTATATTACAATTGCGAATTTTGTAACAACGCTTTCACAAATGTATACGAATTAAAAGATCACATGAAAGTAAGCCATGATAGAGAATACAGTCTTTCAACTTGTAATGTCTGCTTTAGCAAGTTTTACAGCAAAGAAAGAATATTTGAACATAAGAAGATATGTCTACCTCCAGCTAATGTGAATTCTTGTAGCCATTGCGATAAGCTATTTACTGATATATCCAGCTTGGAGTTTCACACTAGAATTTTCCATCCGCAAGCCCAAATAGCTGACTCACATATCACTTCAACAAATGCTGATGATAGTTCAGATGGGACTTTTAAATGTCGACATTGTGATCGTGTTTACTACAGTGATAGATCCCTAAAACATCATATCAAGTTAAAACACACAACGGAAGAAGCAGTCGAATGCCAACTCTGTGGAAAAATATGCAGCAATAAATATTACTTGGCTTCTCATATCAAGATTGTTCATACCAACGAAACATGGTCAAAATGCGATTATTGCGACAAGCAATTCAAATCCAAGAGAAATATACGTCGTCATATCGAATATACTCATTTAGGAATGCAAAGATACAAGTGTATCGAATGCGAAACGTTATTCAAAGAGAAAAGAAGTTTGCGTAAACATGTAAGGACAAAGCATCCCAATTCGGCGGTATTCCCGCAGTGCCATTTCTGTTATAAGCGCTTTGAGTCTGCCAAGTCTTGCAAAATACATTTAAAACTCCTTCACTCATTCAATATGAATACATATCCATGCGACTTATGTTCGGTATCTTTCAGTTCGAAGGAAGCTCTAGACATCCATCTACAAACAAAACATTTAGCTAAAGATGAAATATACAAATGCGAAGAATGCAATCTTGTTTTTAAAGGACACGAGAACTTCGACCAACACAATGAGGTATGCCATATCAGTATTGCACAGAATACCAAGCTAAAAACGCTACCAAGATGCATCATTTGCATGAAGGATTTCAGTACCAGAAAGACTTTAAAACGGCATATCAAAAAGTTCCACGATGGCTTCGATGTTGATGAACTAGCTACGTACGGGTCTAGAAAACGCATGTTCAGTGTGCAATGCGAAGATTGCATAAAAAGCTTCAACACTGACCAGTACAACAACGTATATCAAAGTAGAAAACATTTGAAAGACGCTATCATTTTCAAATGCGAGACATGTGAAATGTCTTACACAACTTTAGAATATGCAATACAACGTTACAAACTATCGACTCAAGACATGTCTTCAGGGAAAATGATTCTAAGCGAACTCTGCACAGCGGAGATGAGTGAAGAGGAAGAGTCTTTTCTAGGGTTTGGTTCTTTACATGAGATGATGGAGCCGGAGAGCACCACGAATGAGGTGATGCAGATCAAATCAGAGCCGATGGATGATGATGTGGTCGTCAAGACTGAACCTAGTTCTCCTTAG
- Protein Sequence
- MFHTFNTLDFVCDYCSRTFTRKYNLQTHIENCHINSSCSCEICGQNFGSPAGLQQHYTRGHNRFDQPFPECDHCGRIFTRKQNLTSHMITVHLQGVGPKICCTICNKNFNSERSLRRHVQLHNSDVENLTCDECHRVFKGKSSLKAHIQAAHLSEKRQTQCPLCDKVYTNYRNLKRHVEMLHGEKEEFKCDICPKVYTSNQSLRRHSRNAHVSDDQDELTCDFCSKVILGKDNLETHIHYFHKEENGDVESIQELPEDDQQYNFACENCDSYFIDEPSLRQHIKTDHSFNTFYKYCKDSLLKQMEDKPVSESPKRQDLYYNCEFCNNAFTNVYELKDHMKVSHDREYSLSTCNVCFSKFYSKERIFEHKKICLPPANVNSCSHCDKLFTDISSLEFHTRIFHPQAQIADSHITSTNADDSSDGTFKCRHCDRVYYSDRSLKHHIKLKHTTEEAVECQLCGKICSNKYYLASHIKIVHTNETWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAVFPQCHFCYKRFESAKSCKIHLKLLHSFNMNTYPCDLCSVSFSSKEALDIHLQTKHLAKDEIYKCEECNLVFKGHENFDQHNEVCHISIAQNTKLKTLPRCIICMKDFSTRKTLKRHIKKFHDGFDVDELATYGSRKRMFSVQCEDCIKSFNTDQYNNVYQSRKHLKDAIIFKCETCEMSYTTLEYAIQRYKLSTQDMSSGKMILSELCTAEMSEEEESFLGFGSLHEMMEPESTTNEVMQIKSEPMDDDVVVKTEPSSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -