Ainn016711.1
Basic Information
- Insect
- Anarsia innoxiella
- Gene Symbol
- -
- Assembly
- GCA_947563765.1
- Location
- OX387391.1:3378643-3379531[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-11 6.2e-08 32.6 0.0 2 37 32 67 31 71 0.93 2 2 4.7 4.3e+03 -2.1 0.1 18 23 98 103 96 105 0.84
Sequence Information
- Coding Sequence
- ATGACAGTTGTGACGCTGCTTGCCGCCTGTTCGCCGTTGGGCTTTGACAGGCTCGGACGTGTTTTTGTAGCCGCCAACAAAATTTTTACGTGCAATGAAGATATGAACGCTGCTATTAGCGAAGTCCTGTCTAAAACTTTATCTATACGCAAAGCAACTGCGAAATATGGCATCAAAGCTGGAACTCTACAGCACCGCATAGAAAAATGTAAAAAATCTTTTGGAGCCAATACCAATCCAGCACAAGACTCAATTTTGCCACAAATAGCATCCACAGATAATGCGCAGCCATCAACATCTCACGCTGCTGCTGTTGAGACTCCGTCATAG
- Protein Sequence
- MTVVTLLAACSPLGFDRLGRVFVAANKIFTCNEDMNAAISEVLSKTLSIRKATAKYGIKAGTLQHRIEKCKKSFGANTNPAQDSILPQIASTDNAQPSTSHAAAVETPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -