Ainn022593.1
Basic Information
- Insect
- Anarsia innoxiella
- Gene Symbol
- -
- Assembly
- GCA_947563765.1
- Location
- OX387404.1:9887831-9894365[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.6e-11 6.1e-08 32.6 0.0 4 39 174 210 171 214 0.89 2 4 3e-12 2.8e-09 36.9 0.4 2 39 226 263 225 267 0.93 3 4 4.1e-15 3.8e-12 46.1 0.0 2 45 281 325 280 325 0.96 4 4 2.7e-18 2.5e-15 56.3 0.0 1 43 332 375 332 376 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGGTACGGGTTTTCTCAAGTGAAATGCGAACCATCATCGGAAGAGGAGGACAGTAATTCGCAGTTTGCACCTAGTTACCTAAACACTCAGTTACTTCGATCCGACGTTCAGCAAGTGAAATTAGATCCAGACTGTCACAATGAAAATAATGCACCGCTGCCGCATCTCATACATCATTTGCAGGGTCCAGGTTTGGAGGAGCTGGCGCCGGCGGGTCCAGCAGCCACGCCGGTGTCAGTCAGCGTGAAGCAAGAGCCCGCGCCGCCTGCTGCTACCTTCGAGACCCTGGAGTCGGCGCCACATGCTGACACGAGTTCTACTCTAATAGACCGCCACCTAGCACTACTGACTGCGAGTGAGGTACCCGACTCGTCCGACTTCACGCCGCTCATGCAGGTCAAAGATGAGCCGCTTTCTGAAGGAGAACAGCACACTCAGAGCGGCGAAGACACGAGCGACTCATCTACCTTGGAGCCAGCCGCGCGAGGCAGCCCTAAAAGCTGGACGCAGAAGGATATGGAAAACGCGCTAGATGCCTTGAGGAATCATCATATGAGTTTAACTAAGGCATCAGCGACCTACGGCATTCCATCCACGACGCTCTGGCAGCGCGCGCACCGACTCGGCATCGACACGCCGAAGAAAGAAGGGTCCGCCAAGTCTTGGAGCGAGGCTGATCTACGCCGCGCCTTGCATGCTTTGAGAGCTGGTGCTATCTCCGCTAATAAGGCTAGCAAAGCTTATGGCATCCCCAGCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGTATCCGGCTGTCGGCGCCGTTCAACGCGGCGCCGACGTCGTGGCGGCGCGCCGACCTGGAGCGCGCGCTGCACTCCATCCGCACCGGCCACTCCTCCGTGCAGCGCGCCGCCACGCAGTTCGGGATACCCACCGGTACATTATATGGGCGGTGTAAACGAGAGGGCATCGAGCTGTCTCGCTCCAACCCGACACCGTGGTCTGAAGATGCTATGGGGGAGGCGCTGGAAGCTGTTAGGGTAGGCCAAATGTCCATCAATCAAGCAGCTATACATTTCAACCTACCGTACTCCTCTTTATATGGAAGATTCAAGAGATGCAGGTATCAAGTGCAAGGCATACCTCCGCAACAAGACCTACAGAAACCGCCAGAAATGGAATCCCAACAAGAGATATACTACCAATCGACACAAATATTGGACGATCAAACGTTCGCGTATAACGAATTCGATCCATCGCTGGCCGTCCATAATCCGCACGAGCAAATGTATAGTCAACAGGCAATGTATTACAACCAGTGTAATGGTATCGCTAGTTGA
- Protein Sequence
- MPGYGFSQVKCEPSSEEEDSNSQFAPSYLNTQLLRSDVQQVKLDPDCHNENNAPLPHLIHHLQGPGLEELAPAGPAATPVSVSVKQEPAPPAATFETLESAPHADTSSTLIDRHLALLTASEVPDSSDFTPLMQVKDEPLSEGEQHTQSGEDTSDSSTLEPAARGSPKSWTQKDMENALDALRNHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSAKSWSEADLRRALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTSWRRADLERALHSIRTGHSSVQRAATQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCRYQVQGIPPQQDLQKPPEMESQQEIYYQSTQILDDQTFAYNEFDPSLAVHNPHEQMYSQQAMYYNQCNGIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -