Ainn005588.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anarsia innoxiella
Gene Symbol
Jarid2
Assembly
GCA_947563765.1
Location
OX387390.1:4656170-4665531[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.8 1.7e+04 -3.4 0.1 70 86 398 414 384 415 0.70
2 3 6.7e-19 1.3e-15 57.9 0.1 8 89 604 682 599 682 0.92
3 3 9.1 1.7e+04 -3.4 0.0 45 64 761 774 756 792 0.47

Sequence Information

Coding Sequence
ATGAAGCCTGCTAAAAGAAGAGTGCAAGCACAGCGCAAGTTTGCGCAGGGTGCTTACATCCCACCATCTGTAGTAACCCCTGCATCAAATAATCGTGAGCCGATAGTGGCGACCAAGGAGGATCATGTCTCCAAAACCCGGCTAGCTCCAAAAAGTTTACTTGACATGATCTCTTTCAATGGACTGCACATACATAAGAACGCTGTTGTGTTACTGGAACGAATGATACCAGACAGTAACAAAATATCACCTGCAAACAAAGAAACACAGTCAGAGCCAAAAACAACTACTGAAGAATACACAGTACCGAGTCCACAGCCGCTCCTTCAAATAGCTCATCCGCAAAGATCTCAAATTCAGAGGAACCATCACTCTCAGAGGCTACACTCTCAAAAGGTGCATCCCCAAAAGACAATGCCAACTCAAAAACAACCGCAAAAGCGACAGCAGAAGCCCACAGAATCTCCATTGGCTAAGAAACGAAAACGGGCCAAGATTTGCATAAATTGCTCTCCTCCTACTAGCGATGTAACGGACACTGAAGATGAAAGGCCCCTGACGTACCTCAAAAATCTACAAAATATGAACAGGAATCTCAATAAAACGTCGTCGCCTGTATTGGCTGCTAATGGCAGGAAACAAGATAAAGTATCGACTGGCGGTAATTTAGATCAAGAACCTATAACAGACGCGGTGGCCCCCACCGTTGATCAAGAGCCCCCAGCGCCATCCACCAGTTTTGTACAGTTCAAGCAACCTTCTATACCTACTCGATTTGCTACAGGAATCACATCGTCGCCACTGACAGAGCAGCAATTTTATGGGTGCGGAGGTATCGTTCGCTGGCTTCAAAGCAGTAACAAAGATTCGCCAATCAACACACCCGTCGAAGAAGTATGTGTTTTACGATACGACGACGTTCGTACCGTAGATTCGGGTCGGAACTCGCCTTGCCCGTCAGAGTCTATACAGACCGTACGAGACGCGATGATGGCATCGGACGAGATGCTAGCCGGCCAGTGCAACACTTGCGTATATTGCGTGCGCACGAAGATGGTCAAAGACTTATCGAGTATGCTCCAAAGAAGCAACCGGCAGCCCTTTGCCAAGGACGTGTACGAGTTTGACACAGAAAGGGAAGCTACCACAGTCTTACCTACGTCCTACATCAACAGTCGCAGAAATTCTAGAACGAGCGAACAAGAGAACCAGCAGCAACAAATTTATTTACACTTTTTATCAAACAAAGAAAACCCTCATCCTCATATCATAAAAATAATGTGTGTCAAAATGCCCAGTGGTGGTCAGACGTTTAAAGCGTGTTTGGTGCCGAGCTCTGAAGCGAACAACATGCCACAAGACTATTCTTTGGCCGAGCATGAGTCTTTGTTTAACCAATTTTTAGAGACATTGCAAATTAGTCAGATGCAAAAATGTGCGTGTGTGGCGAACGGCGAAGATGTGTGCACAGGCGAGTGTCAAGAAGATCAGCCACAGATGTCGAACGGCAACGGTCAGGACCGTCGTGGCACACCTCACGTAGATAAGAGTAAGCATCAAAAGAAGAAGAGTGATCCAAAATTGGTTGAAGCTCCGACGTACCTTCTTACCGAAGACGATATTCTTGATCCAATTTCGTTTTACGAAAAGATCGCGCCAACAGCTGCAAAGTACGGGATCTGCAAAGTGATCCCGCCGCCAAACTTCAAGCCGGTGTGCATCTTGAATGACGACATGCGGTTCTGCGTGTTCAACCATTATATCTGTCGTATGTACAGTCGGTGGGGGCCGGCTGCGAGAGAGATCTGTGCCATGAAAGTGTACTTGGCGAAACAAAACATACCTTTCCAAAGAGTACCGCTACTGGACAGCATGGAAGCAAATCTACCGAAGTTATACTCTTTGGTGCAAAAGTATGGCGGGCTTGAACAAGTGATAGAGAAGAAACGATGGGGCAGAGTTGCTGAGGACCTGCGCTTGAATATGGGACCTAATACAGAGAAGAACCTCGACAACTATTATGTAAAAAATCTGCTCCCGTATGATGCAGCCAATAACTTGGAACGTGACGACATAAAAGCAGAGGTCGAGAGTTGTTGGATAAGGAAAAACAACAAACTGTTGAAATGGGCTAACAACCCACTTCATACTCAGAAGAAAATATTCGGCGAATCTGACTCGTCTGACGACAGTGATTCCGAGCAGCCGGGGGGGATCATAGAAAAAATCGTCGACGAAGCTGAAGACTGCGTCGTTAGCGGCAGAACTATGAACTTTAGTGGTTTCAAGAAAGTGGCAAACACAGCTAAACAGATGTACCAACCAAACGAGGCGGCGACAACTGAGCAGATTGAGAAGGAGTATTGGCAGCTCATGCTGTTCGGTACGGACCACATCTGTGTAAACTACGCTTGTATAGACACGGGCGCTAGTAACCAAGGCTTCTCGAAAAATAAGTCCCATACCTGCGGTAGACATCCCTGGAATCTTAAGGCAAGTCGGCGAATTTATTGCGTGGCAATTGCGAATTTTTGGCGTTTCAATTGCGATTAG
Protein Sequence
MKPAKRRVQAQRKFAQGAYIPPSVVTPASNNREPIVATKEDHVSKTRLAPKSLLDMISFNGLHIHKNAVVLLERMIPDSNKISPANKETQSEPKTTTEEYTVPSPQPLLQIAHPQRSQIQRNHHSQRLHSQKVHPQKTMPTQKQPQKRQQKPTESPLAKKRKRAKICINCSPPTSDVTDTEDERPLTYLKNLQNMNRNLNKTSSPVLAANGRKQDKVSTGGNLDQEPITDAVAPTVDQEPPAPSTSFVQFKQPSIPTRFATGITSSPLTEQQFYGCGGIVRWLQSSNKDSPINTPVEEVCVLRYDDVRTVDSGRNSPCPSESIQTVRDAMMASDEMLAGQCNTCVYCVRTKMVKDLSSMLQRSNRQPFAKDVYEFDTEREATTVLPTSYINSRRNSRTSEQENQQQQIYLHFLSNKENPHPHIIKIMCVKMPSGGQTFKACLVPSSEANNMPQDYSLAEHESLFNQFLETLQISQMQKCACVANGEDVCTGECQEDQPQMSNGNGQDRRGTPHVDKSKHQKKKSDPKLVEAPTYLLTEDDILDPISFYEKIAPTAAKYGICKVIPPPNFKPVCILNDDMRFCVFNHYICRMYSRWGPAAREICAMKVYLAKQNIPFQRVPLLDSMEANLPKLYSLVQKYGGLEQVIEKKRWGRVAEDLRLNMGPNTEKNLDNYYVKNLLPYDAANNLERDDIKAEVESCWIRKNNKLLKWANNPLHTQKKIFGESDSSDDSDSEQPGGIIEKIVDEAEDCVVSGRTMNFSGFKKVANTAKQMYQPNEAATTEQIEKEYWQLMLFGTDHICVNYACIDTGASNQGFSKNKSHTCGRHPWNLKASRRIYCVAIANFWRFNCD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-