Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947563765.1
Location
OX387399.1:6773376-6775808[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-23 9e-20 71.2 0.1 3 89 94 176 92 176 0.93

Sequence Information

Coding Sequence
ATGGATAGCAAGAATATTCAGAAAAATGCTATGCAAAAAAGTGCAGAATTTACCTTCACCCCGCCGCCGGAGGCTCCAGTATTTGAGCCAACACCCGAAGAATTTGCGGATCCACTAGCGTATATTGCTAAAATTCGCCCAGTGGCTGAGAAGACAGGAATATGTAAAATTAAGCCCCCAGCACGATGGCAGCCACCCTTTTCTCTGGATGTTGATAAGTTAAAGTTTGTTCCAAGAATACAGAAGGTAAATGAACTGGAGGCTATCACTAGATTGAAACTCTTATTTCTTGAAAAGATACTGAAGTTCTGGGAACTGCAAGGGGCACCATTAAAAATACCTATGATAGAAAATAAGACTCTGGATTTATATTGCCTCAAGTTTTGGGTTGATGAAGAAGGTGGTTTTGAGAATTGTAATAATCCTAAAAAATGGCGTAAGATAGCTACTTCCATGGGCTACAACCCCAATGCAAACACTATGAATTTTCTACGCAACAACTATGAAAAAATTTTGCATCCTTATGATATTTTTGAAAAAAGTAAAGCAGATATACTGAAAACAGTAAAGAAAACCGAAGTCAAGCCAGAAATTAAAACAGAAGTCTCAGCCAATGGTCAACTTACTCTTGTTCCAGTGGAATCAATTACAAAGATCAAGGATGAGTTTGATGATAAACCTCACACCAGTATTAAAAAAGCTAAGACAGGATCAGATATAAAGCCTGATGTGGAATGTACTAAGAACAAAGTAAACAATGAAGAAATGAAACGAAATAGAGAATTAAGGAGATTGGCTTGTTATGGACCTGGTCCAAAAATGCCTGGATTAAATGATGAGGAATTTGATATTACTAAATCAAGAAAAAGACCTAGATATGATTTGGATCCTTTAGCAATTTACACATGTGCTATTTGTCAAAAAGATCATAGAGATGATTTGTTATTAATTTGTAATGGATGTTCTGATACCTATCACACTTTTTGCCTCAAACCACCTTTAAGTGCTGTTCCTGATGGAGATTGGCGTTGTCCTTGTTGTATAGCTGAAGAAGTTCACAAACCAGCTGAAGCATTTGGATTTGCTCAAGCTGAAAGAGAATACACTCTTCAACAGTTTGGAGAAATGGCTGATAAGTTTAAGTCTGATTATTTTGGTATGTCTGGCCATTTAGTACCAACTAGCACAGCAGAAAAAGAATTTTGGAGAATAATATCATCAGTTGAAGAGGATGTTACTGTTGAGTATGGAGCAGATTTACATTCAATGGATCATGGTTCAGGTTTTCCTACAAAGTCATCTCTCAATCTCTATCCTGGTGATCAAGAGTATGTAGATTCAGGATGGAATCTGAACAATTTGCCAGTCCTAGATGGATCTGTTTTGAGATTTATTAATGCTGACATATCTGGTATGACTGTACCTTGGATGTATGTGGGTATGTGCTTTTCTGCATTTTGCTGGCATAATGAAGACCATTGGAGCTATTCAATAAATTATTTACATTGGGGAGAGGCAAAGACTTGGTATGGAGTGCCAGGAGGTGGAGCTGAACTTTTAGAAAATGCTATGAAAGCAGCAGCTCCTGAACTTTTTAAGTCACAGCCAGATTTACTCCACCAATTGGTCACAATTATGAATCCCAACATTTTGATGGCTGCAGGAGTTCCAATTTATAGGACAGACCAGAATGCTGGAGAATTTGTTATAACATTTCCCAGAGCCTATCATGCGGGATTCAACCAAGGTTACAACTTTGCAGAGGCTGTTAATTTTGCTCCACCTGATTGGCTTCATATAGGTAGAGAATGCATACTACACTACAAAAATCTAAAACGATTCTGTGTGTTTTCACATGATGAACTCATATGTAAAATGGCATTGGAAGGTGATCGTTTGGAGTTGGAGACAGCATTAGAAACTCAAAAAGAGCTAGTTCATGCTACTGAAGAAGAAGGTGAATTAAGAGCATTGATTGCCAGGAAAGGTTTGAAAAATGTTCGAAGAACTGCATTTGAGTTGCTTGGTGATGATGAACGTCTTTGTGAAGTGTGCAAAACAACTTGCTTCTTATCATCAGTGTCTTGCTCTGTATGTAATACTATGGGCTGCTTAATGCACGCCTGTGATTTTTGTTCATGTCCATGGGATAAAAAGACGCTAAACTATCGATATGACATGGATGAACTGCACATCATGTTACAGACAATAGATTTCAGAGTAAATAGTTTTGATAAATGGATGACCGAAACTAAAAAAATATTGCTTCCCACTGCACCTGATATCGGCAGGGTCCAGAAACTTAAAGCTTTAGTAGATGAAGCTGATGAATTAAAAATACCAAAGTGCACATTGTTAACTCAATTGAAAGACGAGTATAAAAAAGCAACAGAGAATGTTGAACCCATTGTTATAGAACTAGATGACGATTAA
Protein Sequence
MDSKNIQKNAMQKSAEFTFTPPPEAPVFEPTPEEFADPLAYIAKIRPVAEKTGICKIKPPARWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWELQGAPLKIPMIENKTLDLYCLKFWVDEEGGFENCNNPKKWRKIATSMGYNPNANTMNFLRNNYEKILHPYDIFEKSKADILKTVKKTEVKPEIKTEVSANGQLTLVPVESITKIKDEFDDKPHTSIKKAKTGSDIKPDVECTKNKVNNEEMKRNRELRRLACYGPGPKMPGLNDEEFDITKSRKRPRYDLDPLAIYTCAICQKDHRDDLLLICNGCSDTYHTFCLKPPLSAVPDGDWRCPCCIAEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFGMSGHLVPTSTAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEAKTWYGVPGGGAELLENAMKAAAPELFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPPDWLHIGRECILHYKNLKRFCVFSHDELICKMALEGDRLELETALETQKELVHATEEEGELRALIARKGLKNVRRTAFELLGDDERLCEVCKTTCFLSSVSCSVCNTMGCLMHACDFCSCPWDKKTLNYRYDMDELHIMLQTIDFRVNSFDKWMTETKKILLPTAPDIGRVQKLKALVDEADELKIPKCTLLTQLKDEYKKATENVEPIVIELDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01487498;
90% Identity
-
80% Identity
-