Basic Information

Gene Symbol
-
Assembly
GCA_963576865.1
Location
OY756388.1:7828024-7837645[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 7.2 7.5e+02 2.0 0.6 1 23 53 76 53 76 0.94
2 20 0.15 16 7.3 2.1 1 23 83 106 83 106 0.97
3 20 0.0024 0.25 13.0 1.1 2 23 216 237 215 237 0.98
4 20 5.4 5.6e+02 2.4 2.6 1 23 243 265 243 266 0.94
5 20 0.18 19 7.1 3.2 2 21 506 525 505 526 0.94
6 20 4 4.1e+02 2.8 1.0 1 23 625 647 625 647 0.82
7 20 0.29 30 6.4 0.2 2 23 782 803 781 803 0.96
8 20 0.016 1.7 10.4 0.9 2 23 881 902 880 902 0.96
9 20 0.086 8.9 8.1 2.1 1 23 910 932 910 932 0.97
10 20 0.14 15 7.4 3.4 1 23 968 990 968 990 0.95
11 20 0.00028 0.029 15.9 4.0 1 23 998 1020 998 1020 0.99
12 20 0.092 9.6 8.0 1.9 1 23 1095 1117 1095 1117 0.99
13 20 5.9 6.1e+02 2.3 1.2 1 19 1173 1191 1173 1195 0.92
14 20 9.1 9.5e+02 1.7 0.1 1 23 1201 1223 1201 1223 0.85
15 20 0.00071 0.074 14.6 0.0 1 23 1290 1312 1290 1312 0.96
16 20 0.004 0.41 12.3 0.6 1 23 1318 1340 1318 1340 0.96
17 20 0.0077 0.8 11.4 2.6 1 23 1430 1452 1430 1452 0.97
18 20 0.00019 0.02 16.4 1.4 1 23 1458 1480 1458 1480 0.99
19 20 2.1 2.2e+02 3.7 2.4 1 23 1571 1593 1571 1593 0.96
20 20 0.0096 1 11.1 3.6 1 23 1604 1626 1604 1626 0.98

Sequence Information

Coding Sequence
ATGCTACAGCAGATGTCCTCGCCGTCGAACGCACTAGTCGGCGAGGTCGGCTCCCTTGTGCGCCCCTTCGAAGGCCGCCAGTGCGGCGACGCGTCCTCCGAGGCCTCCTCCGACGCCGCCGAAGAAGACTTACCGCAGTGCAAGATTAGGAGGAATTACAACTGCGCTAAGTGCACTTTCTACACCCAGAACCCGCGCGCTTTCCTCGTACACACGCGTGACGTACATTTCGAAAGATTCAAAATATACGATTGCCCCAGTTGCGTGTACGCTTCTAGACATCATCAGAAACTTGTGAGACACATCAAAATGGTTCACGGAGCAGCCGCCACGACGGCCGTCAAAATGGACGTCGAACTACCCGCCGCGACGGAAATCACAGAACCGGTCGAGCGAATAGAGGACTTACTCGAGGAAGTGGAAGAATGCGATGACATTGAAGTAGACGTTGATGACTGCTCCGAGGAGCTGTTCGAGCGCTCCGTCGACATCGAGGTCGATGGAGACAAATCGACAGCCGACGAAGGCACTCTTTCTTTACTGAAGAGTGAAAACAAATACTTTTCTTGCACCAAATGCAGCTACGCGACCCACATAAAAGCGCGGTTTACGAAGCACGTCAAGTATCATTCGATGCCAATGAACAAGTGTACCATATGCGATTTTCGCTCGCCTTACAAATGGAATCTAGACCGCCACATGAAGAATCACGGTGGGAGCGGAAGCTTCAAGTGCTTCATGTGCAACTTCACGGCGGACATCAAGCAAAGTCTGACGTCGCATGAACTGAATCATCACGCGCCGCCCGCGGGCCAATCGGTTGCGAGTCGTCGCCGCAACCGGGTGGGCGCCAGCGACATTATGAACGCGCTCATCCTCAAGGAGGACGAAGGGAGCGGCGACTCGCGGTCCTCATACTCGGCCTCGGAAATGGGTCTTCAGTGTGCAGATAAAGATATGATGAGCTGCAACAGTGATTCCAATGATGCTACGGCTGCAGATGCAGGCAGCAAAATGGATAGTTCACACACACAGGATGCTCAAAGTCAACTGTCACCCAACTCCTCCACAGAGGATTCCAAATCACAAAAGCACAATAGGAAAATTCCCAGACCGTTACCACAGCTCATTCCGTTGCATGTGTCGACACCCAATAATAATAAGGCCTCAGGTGAGCCACCAACAAAGAAATTTAAAGAAACTCCAAATACGGAATTAGCAGATTcaaataaagcaaataaattcGAAAATTTACCTGTTGACATCACTTTGATTCCGGTAAACAACATTTCTTCAAATACAAAAGAAACTGTGAATCGTAAGAAAAATAACTCGTTTTTTGACAAACTTAAAGAAAGATTGTTAACAGAGACAGGCAAAGAAGGATCtcttatttgtaaaaattgtgGGTTTGAAAGCAAATGCTTATCTGAACATTCCGTTCACGAGAAAAATTGTACTTCTCCGCTGAACAAAACTTCGTCGAACACATTACTACCAAGTCTAAGTTCAACACGTTGCCAAAATTGCCGACACAGATGTAAATCAAGCGCAGATCTTATCTTACATATGAAATCATGTaggaaaattgaaaaaatggaAGATGACGcttttgttgaaataaaaaGTCAAGATAGTAATGatgaaataatacaaatacacGAAAGAGACACAGAACCACATCCGATGGAAAATGTCGTATTCGTATGGAACAATATTCATCAGGATACGAATAAATTTGACACACCGCttgacataaatattaatgatgATTCCACTCTCCCGGAAATGTGTAGAATTTATGATTCGGAAATCGCGGAAGATAATGAAGGCATGAATTTGTCCCCAAGTCAAGCCATgggtaaaaaagtttttaaatgtcCACACTGTCCATTTTGGGCTTCCACTGCGTCAAGATTTCACGTCCATATCGTAGGGCACTTAAATAAAAAGCCTTTCAAGTGTTCTCTATGTAAATACAAATCAAACTGGCGTTGGGATATTACTAAACACATCAAACTAAAGTCAGCTAGGGACCCCGAACATAACGACGCTAAAGTTCTTATGACCGATGAAACAGGACGAAGAAACTACAGCAAGTATAACAAGTTTTTAGCCATGTCGGTTCTGAACGAGAACGGAGAGACGGTATTTCACTACATAGATCAGAATTCTTCAGCTGATCCATCGATCGAGGGTATCGAATCTTATAATGACATGAATGACAACTTTAATCAGTCATTAGACATGCAGCCGCTCAATCTACACATGAATATTGATCTTAATGGTGAACTATTTGATAATCGAAGTTTAGATCAAAAGAAACCTAAAAAGACATTGTGGAAATGCAAGAAATGCAATTACAGAGACCCATCTAAAGAGGCATTATTAGCACACGTTCGGGAACACTCCAGAGCTGACGGGAACCACCCAGATGAAATGAAATCTCTCAAAAAGCCTGAGAATCTCCCAGACCCCGCAGACTTGGCGTACCGTTGCGGCCACTGCAATCAGTTATCGAATTGGAAACATGTGATACAGAGACACTGCCGCCTGAAGCATGACGGtgttataaaagtaataacCACAGTGAAACCGAAACCAGACCCGTCAATGACTCTCAACGAGATCCATGGGGACACGTGTAACAAGTGTCCGTTTAAAACAAACGATAAGAAACTCTTACTGGCACATCTACAACAGCATCAACCATCACCTCAATCCATTTTCAAGTGCTTCTTCTGCCCCTACTTTGTCAAGGATGAACACGAATTGATCCAACATCTAACTTTGCACGGCGTTAATGAACCAGAAGATTACATAGCAAAAGCAATGGGTAGTAAATCTCCTGTCCCTGAGCCAGCTGCAAATTCAACGCCGAATGCGTCTTCTACGAAGCGACACAAATGCACGGAATGTCCTTACGAAACAAACAGCAAGTCTCAGTATATGTACCACGAGCAGTTCCATAGACTTCCGGCAGACACGCCTTATAAGTGTCCTGAATGCAACTATAGCGTATCCAAGAGACATTTACTACACCAACATCTGAGGGTTCATGGGATAAACACTAAGAAGCTTGAAGCTGAGTTAGAATCTAAAAATGATCTGAAGATTGAAATAAATCTTGAAGAGATCCCATTTGTTTGGGTTTCGGcaaaaaatgaatttcataaaatgtacaaATGTCGCTACTGTTCGTATGTAAATTCACAGAAATGCAAAATTCCTAATCATGAAAAAATTCACtgcattatttttgaaaacagTGAAATCACGGTATATAAATGTTTGGAATGCAAATTTACATGTGACAATGCTGTACGGCTAGCCGAGCATTCGAGAACCCACGGTGAGATATATGGTCGCATTTATTGTCCTGTTGACTCTGATGTTCCAGATGAAGAACAAATAGCTAAGTTGCGTAAAGTTATTGAATCTGAAAAAAACTCAACTTCGGAAGAAATTTTTAATGAAGATGAAATTGAGAGTGAAAGGAAAGAATCTAAAACACTGTATTTCTGTCAAAAGTGTCCCGGAAGATTCTTTGCTAACGAGGAACTCAAAATACAtgacaaatttcatgatttagCATTTCCGTATAGATGCAAAAGCTGCGAATATTCCGTTCCCGAGGAAACTGATCTCAGTGGGCACAATGTAGTGCATTCAGATGAATAtcatacaaaaactaaaatgcttaaATTCATTCACAGTTGCAGTGCTGTCCACAAGCAACCTAACCTAGATTTAGTTCACTGTCCAACAACATCAGAAATAACTTGGGTGGTTTCGAAGCCATGTAAAAATTATGATAACCAAACAAGCCATAAAGGATCGAACGAGACAAAACAAGTGCCAAAACAATACGCATGTAAAGAATGTCCAGCTAGATTTATCAAAAGTTCGGCCCTTACCGGTCACATGGCATTACATGGAAGTAATTATCCACATAAATGTAAATTGTGCAACTACGCTGTAAGAAACACAGGTAATTTGGCAAAACATGTAGCCTTACATGAAAATGATGGTAAAGCGTCCACTTGTGATTATGAATCCGGAGAAGATATGGATTATAAAAACATACCCCTATCAGGGACtgatttatttcaaagaaagaCAGAGGCTCAAAAAAGAGTCttaaatgataaagataaattgGTGAAGCCAAATGATCATTTTCCACCAGTGCTGCAAGCTGATCCTCAGTTCGGATACTTAATGCATGGCAATCCAGAATTTATTTATCCCACTTATTTGAAAAACGGTCGTCAGAAGGAAAAGCGATACAAATGCCACAAATGTCCATCTGCGTTTGAGAAACGAGagcaatataaaatacatttatcacTACATGGCTCCAAACAAAGGTACAAATGTGAGCTTTGCGATTATTCTGTGAAGTATTATGCTAATTATGTCCAACATATGAGAAAGCACCAAATGAATGATGAAGCTCAAGCTGAAAGAAAGAAAACCAGTAATGgtattattgaaactgaaaCTCAAGAACACAAGCATGAAGATAACGACAATATTAAATTAGCTATTAAAACAATGCCTAAAGGGACTGCTAAAAGCGACTTTCAACAATTCTCAATTAGTGATCAGCAAACCCTCAGATTACTGCAACGCAGACGCTCGATGAACAACAATGGTAAAGAACAATCTTCGCCACCAGAGCCATCACCAACAAAAGACCGAAAGTTGCACATGTGTTTGCTGTGCCCATATACAAACCAACGCCAAGATGCTTTATTTAACCATTATAAGCGCCATGATGATACCGACGTCCTTAATACAGGGAATCATAAATGCTCTTACTGTGACCTTGGAGTAGTTCAGTCCCATTTTCTTCGAGaacatttaaaaacacattttaactaCCAAAAAACATTGACGCCGGAGTGCTTTGTTGCTAATGAAAACGTAAGTTTCACTGTTACGAAGGTAGATGAAGATGATTCACCCATTGATCTCAAAATAGATGTGCAAAGCAAAAATTTCAAGTGCAATGAAGAcaaaatttttgttaacataCAAACAGGGGAACTTATGGTCGAATAG
Protein Sequence
MLQQMSSPSNALVGEVGSLVRPFEGRQCGDASSEASSDAAEEDLPQCKIRRNYNCAKCTFYTQNPRAFLVHTRDVHFERFKIYDCPSCVYASRHHQKLVRHIKMVHGAAATTAVKMDVELPAATEITEPVERIEDLLEEVEECDDIEVDVDDCSEELFERSVDIEVDGDKSTADEGTLSLLKSENKYFSCTKCSYATHIKARFTKHVKYHSMPMNKCTICDFRSPYKWNLDRHMKNHGGSGSFKCFMCNFTADIKQSLTSHELNHHAPPAGQSVASRRRNRVGASDIMNALILKEDEGSGDSRSSYSASEMGLQCADKDMMSCNSDSNDATAADAGSKMDSSHTQDAQSQLSPNSSTEDSKSQKHNRKIPRPLPQLIPLHVSTPNNNKASGEPPTKKFKETPNTELADSNKANKFENLPVDITLIPVNNISSNTKETVNRKKNNSFFDKLKERLLTETGKEGSLICKNCGFESKCLSEHSVHEKNCTSPLNKTSSNTLLPSLSSTRCQNCRHRCKSSADLILHMKSCRKIEKMEDDAFVEIKSQDSNDEIIQIHERDTEPHPMENVVFVWNNIHQDTNKFDTPLDININDDSTLPEMCRIYDSEIAEDNEGMNLSPSQAMGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFKCSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMSVLNENGETVFHYIDQNSSADPSIEGIESYNDMNDNFNQSLDMQPLNLHMNIDLNGELFDNRSLDQKKPKKTLWKCKKCNYRDPSKEALLAHVREHSRADGNHPDEMKSLKKPENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPSMTLNEIHGDTCNKCPFKTNDKKLLLAHLQQHQPSPQSIFKCFFCPYFVKDEHELIQHLTLHGVNEPEDYIAKAMGSKSPVPEPAANSTPNASSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGINTKKLEAELESKNDLKIEINLEEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIIFENSEITVYKCLECKFTCDNAVRLAEHSRTHGEIYGRIYCPVDSDVPDEEQIAKLRKVIESEKNSTSEEIFNEDEIESERKESKTLYFCQKCPGRFFANEELKIHDKFHDLAFPYRCKSCEYSVPEETDLSGHNVVHSDEYHTKTKMLKFIHSCSAVHKQPNLDLVHCPTTSEITWVVSKPCKNYDNQTSHKGSNETKQVPKQYACKECPARFIKSSALTGHMALHGSNYPHKCKLCNYAVRNTGNLAKHVALHENDGKASTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKTSNGIIETETQEHKHEDNDNIKLAIKTMPKGTAKSDFQQFSISDQQTLRLLQRRRSMNNNGKEQSSPPEPSPTKDRKLHMCLLCPYTNQRQDALFNHYKRHDDTDVLNTGNHKCSYCDLGVVQSHFLREHLKTHFNYQKTLTPECFVANENVSFTVTKVDEDDSPIDLKIDVQSKNFKCNEDKIFVNIQTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00075086;
90% Identity
iTF_00075086;
80% Identity
-