Ahor032557.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756413.1:11590489-11595418[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.55 57 5.6 0.1 1 23 216 238 216 238 0.97 2 12 3.5e-05 0.0036 18.8 1.5 1 20 244 263 244 267 0.92 3 12 0.31 33 6.3 1.0 1 23 280 302 280 302 0.92 4 12 1.2e-05 0.0012 20.2 3.3 1 23 554 576 554 576 0.99 5 12 0.13 14 7.5 5.3 2 23 582 604 581 604 0.96 6 12 0.062 6.4 8.5 4.8 1 21 611 631 611 633 0.94 7 12 0.29 30 6.4 3.8 3 23 638 658 637 658 0.98 8 12 0.13 14 7.5 0.9 2 23 671 693 670 693 0.96 9 12 3.9e-05 0.004 18.6 1.5 1 23 699 721 699 721 0.98 10 12 2.3 2.4e+02 3.6 3.8 2 23 728 749 728 749 0.98 11 12 4.1e-05 0.0042 18.5 1.3 1 23 755 778 755 778 0.98 12 12 3.3 3.5e+02 3.1 4.7 1 23 782 805 782 805 0.96
Sequence Information
- Coding Sequence
- ATGGAGCCAAATGATTTCCCTATTTTATTTGCTTCCGACGAAGATAATTGTATGAAAAGTAAGCCGAAGATACTGaattttacttataatacgTCTGAAAATACCATAGGAGTCGgtggaaataaaaaacaagaaataataaGAGAAAGTTTGACGACCAAGAATGCTGTAAAGTATCTTTTAGAAGGACGGCTAAGAAAGAAGGTTTGTCGGTATTGTTTGAACGTGGCGTCTCCTCTGTCGGAACTAGACCAAGTTTTACAGGTGGCTGGGTCTGGAAAGCTGTTCAAAGTGACTATTCGTGATATGGTGGCCAGTTTCTATCCTTATAAGgTAGCAGACGATCCTAACTTCCCAAATAAAATCTGCAACCAATGCTTGAACCAGACAATCAGGTCATACCTGTTTACACAGCAGTGTGAACGTTCTGAACGGGCATTACGGAACTGCTTCGAGGATATCTACAGTAAATTAGAAAAACTGGACCCTGTGGAACCTCAAAAGAAAAGAGGCCGACAGAAAATAAACCCCAACCACAATGTTTTATATTCGAATTATGAAAAAGTTATCAATTACGCTGAGCCCGTTATAAATATAGTGAACAGTGGTACAGAATTAACTGAAAAAGTTGATACTAAAAGCAAATTTGAGTGCCTAAAATGTTGGCAGATACTTCCGAGCATGGAATCATTGCTTAACCATGAAAAACAGCATCCAAAATCCATGTGGTATAATTGCCGGTACTGTGGCAAGTCATTTACTAAACGTAACCTATTGAAGAAACATGTATGGACTGCCCATGAATCAGGGAAACAACTTCAGTTGCCAAAGACTGAGTTTAAATGCACTGACTGCGGTGTGGTGAGTGAAAGATATAATGAACACCTGCAGCATATTGAGAAGCACAAATTCCAGATGATTATGGAGCATTTGATGGAAAGAAATATGGACAAGCTGTGTGCGGTCTGTCTAGATAACAAACAGAAGTTGGCAGATATGGAAGACTTGGTATGTCTTCATGGAGGCTTTCCAGAGATGATGGGAGAAAGGACTCTGTACAGTATTCTTGGCTCAACAGTACCAGAtATGAATAGCCTTCATAACTTCCCGGGGACAAAAATATGCGAAAAATGCCTTAACCACGCCATCACATCATATGTTTTCATACACCAAACTCTATACGTTCGAAATAGACTTAATACATGCATAAGTTTAATGTTAGATAacttaaatcaaattaataaaccagaagctaatttattaattgaaatttCCCAAAATACCATTATGCCTCTAGTGGAACCAAACTTTGATGAAAATATACTTTTGAAAGAAGATGAAATAGATGAATCAAAACTATATATAGATGTTCTAGAAGACGAATTCAGACAAGATTCAGAAAGCGAACAGAGTTCCAAAGTATCTGAAATTGATGACAAAGAAGCAATAAACACTGACATGTTCGAAGAAGTCGCTGCGACACTTGGAGATGATCATTTAAGCCCAAATCTTGCAAAGAAAGCAGTTAAAACgtatgagaaaagaaaaattcccAATGGTGTAAACGAAAATAAATTCAACTCATTCAATGATGTTTGCAGTGAATTTTTAACATTCAAAAAGAGGAAAAAGCCTGTAAGACGGTACTATAGTTGCAAATACACGTGTCCGCTCTGTAATAAACACTTCATATCTGAATACTTCTTAAAAAGGCACATCATGAAACACGTTTTTAGAAAAGTTGAATGTAACCTATGTAGTATCCAATTCAAATCTAAATTTTACCTTCACGAGCACAAGAAAATGTgtcatattcggaatcagtaCACCTTCTCTTGCACGACATGTAGTAGAACATTTGAGAGCAGCAACAAACTGGATCGTCATACAAATTGTCATAGCACAAAAGATTGTCAATTGTGCAGTAAGAAATTTCTGTCTCAGAACCATTACGATAGTCATATGCAGCGTCATGCTGTCAAGCTTCAACTAATGCAGAAGCCAGCCCAAACGTGCAGTTTCTGCGAAAAAGAATGCGCAAACGACAATGAACTCTCAGTTCATGTTAATAAAGTGCATTTGCAAATAAAGCCGTACAGTTGCGATATGTGCGAGAGACAGTTTTATACAGAATCTAACCTGAACAGTCACAAAAAAGTCCACAGTTTACGGAAAAGGGAAAAATGCGAGTTTTGTAGCAGAACCTTAAAATGCAGAAGAGATTTAGTGGTCCATGTGAGAAAGCATATTGGCGTTCAGCCTTACTCTTGCCCAGTGTGTGGGCAAACCTTTTATTCGAGCAACAAAGCAAAGAACCACATGAAATCCTTCCATGGAGGCAAATTCTGTTGCAAGCTTTGCAAAACAGTACTTCTGACTAAATTTGAACTTAAAGAACACATACATAGGGTGCATTATATGATTTAA
- Protein Sequence
- MEPNDFPILFASDEDNCMKSKPKILNFTYNTSENTIGVGGNKKQEIIRESLTTKNAVKYLLEGRLRKKVCRYCLNVASPLSELDQVLQVAGSGKLFKVTIRDMVASFYPYKVADDPNFPNKICNQCLNQTIRSYLFTQQCERSERALRNCFEDIYSKLEKLDPVEPQKKRGRQKINPNHNVLYSNYEKVINYAEPVINIVNSGTELTEKVDTKSKFECLKCWQILPSMESLLNHEKQHPKSMWYNCRYCGKSFTKRNLLKKHVWTAHESGKQLQLPKTEFKCTDCGVVSERYNEHLQHIEKHKFQMIMEHLMERNMDKLCAVCLDNKQKLADMEDLVCLHGGFPEMMGERTLYSILGSTVPDMNSLHNFPGTKICEKCLNHAITSYVFIHQTLYVRNRLNTCISLMLDNLNQINKPEANLLIEISQNTIMPLVEPNFDENILLKEDEIDESKLYIDVLEDEFRQDSESEQSSKVSEIDDKEAINTDMFEEVAATLGDDHLSPNLAKKAVKTYEKRKIPNGVNENKFNSFNDVCSEFLTFKKRKKPVRRYYSCKYTCPLCNKHFISEYFLKRHIMKHVFRKVECNLCSIQFKSKFYLHEHKKMCHIRNQYTFSCTTCSRTFESSNKLDRHTNCHSTKDCQLCSKKFLSQNHYDSHMQRHAVKLQLMQKPAQTCSFCEKECANDNELSVHVNKVHLQIKPYSCDMCERQFYTESNLNSHKKVHSLRKREKCEFCSRTLKCRRDLVVHVRKHIGVQPYSCPVCGQTFYSSNKAKNHMKSFHGGKFCCKLCKTVLLTKFELKEHIHRVHYMI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -