Basic Information

Insect: Anania hortulata
Gene Symbol: RREB1
Assembly: GCA_963576865.1
Location: OY756410.1:8110456-8129165[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.045 4.6 9.0 0.4 1 23 92 115 92 115 0.95

2 12 9.9 1e+03 1.6 0.4 1 10 157 166 157 167 0.91

3 12 0.024 2.5 9.8 0.1 1 23 307 329 307 329 0.97

4 12 0.0013 0.13 13.8 0.4 1 23 338 360 338 360 0.99

5 12 0.00079 0.082 14.5 2.0 1 23 366 389 366 389 0.97

6 12 0.0032 0.33 12.6 1.6 1 23 737 760 737 760 0.96

7 12 0.00027 0.028 16.0 1.3 2 23 954 975 953 975 0.97

8 12 0.027 2.8 9.7 5.3 1 23 981 1004 981 1004 0.97

9 12 0.32 34 6.3 0.9 1 23 1037 1061 1037 1061 0.89

10 12 0.52 54 5.6 0.1 1 23 1086 1109 1086 1109 0.90

11 12 0.015 1.6 10.5 0.2 2 23 1149 1170 1148 1170 0.96

12 12 0.03 3.1 9.5 5.3 1 23 1176 1198 1176 1198 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.045	4.6	9.0	0.4	1	23	92	115	92	115	0.95
2	12	9.9	1e+03	1.6	0.4	1	10	157	166	157	167	0.91
3	12	0.024	2.5	9.8	0.1	1	23	307	329	307	329	0.97
4	12	0.0013	0.13	13.8	0.4	1	23	338	360	338	360	0.99
5	12	0.00079	0.082	14.5	2.0	1	23	366	389	366	389	0.97
6	12	0.0032	0.33	12.6	1.6	1	23	737	760	737	760	0.96
7	12	0.00027	0.028	16.0	1.3	2	23	954	975	953	975	0.97
8	12	0.027	2.8	9.7	5.3	1	23	981	1004	981	1004	0.97
9	12	0.32	34	6.3	0.9	1	23	1037	1061	1037	1061	0.89
10	12	0.52	54	5.6	0.1	1	23	1086	1109	1086	1109	0.90
11	12	0.015	1.6	10.5	0.2	2	23	1149	1170	1148	1170	0.96
12	12	0.03	3.1	9.5	5.3	1	23	1176	1198	1176	1198	0.97

Sequence Information

Coding Sequence: ATGCAGGGAGCTGCCagcgcccccgcgccccccgcggcCGAGCCGCCTTCTTCTCAACATATCAAAACAGAGGAGGTCATCACGGAAGCCAAAGTCGAAGCTAAGGAAATGGACAAAATGATTGAAAAACAAGACTTGAGACCTGCCAGGACTACCAGCATCGACAGCGACAATCGCTCGGACAGAAGCGAAGAAGAAGACACTCGAAGATCTCGCAAACGGGCAGCATCCACGTCACCTTCACCAATACCTATGGATAAGAGAATCGCCCGATTTGAATGCCCAAAGTGCCGACTGCGTTTTGACTCAGCTAATGCCTTCGACCTCCATCGTTTTACAGCGCACGGAGAAGACACTAGAACGGGCTTCGATGATCTTACTTTTGTAGACTTCTCCAGAAAAAAGATCCCTGAGATAGCGCGCGGAGTCTGCGACCGCAATGCTCATATTTCTATCAATGAACAACGATATCGGTGTGATATGTGCACAAGGGATTTCCCATGCGGAGAAGTTTTAGATATTCACCGGAAAACATGCACCGGTGCCACTAGAATCACAAGTCCTGAACGGGATAGAAGAGAAGACTTCTTTGCTAAGCTTGATCTAAGAAATAGGTCATTTGGGATCCCTGGCACATTGACTCCACCAATGGATAGATTCACGCCAAAGTTCGAAGATGGACATCTTACTACTAACGGCATTAGACACATCGATGCTGCCAGAGATTTAGCTGACATTCAGTCTATCCTGAATGTAACATCTGCTGGTAGTCTCTTAGAGAGATTAACTGGCACTAGGCTACCCGCTTTAGAAAGTACAGTATTAACGCCTCCAGATACCGTTGGTAAAGACAGAGACCACGAAGAGACTCAGGATAACTTTGCAGCTGAGTTTAGACGTATGAAGCTACGAGGTGAATTCCCTTGCAGATTATGCCCTGCCAAGTTTCCTAATCTGCGAGCTTTGAAGGGGCACAACAGAGTACATCTTAGTGGAACAGGTCCTGGACCATACCAATGTAACATGTGCCCTCATGCATCTCTAGATAAGGCAGCACTAGTTAGACATATGCGAACTCATAACGGAGATAGGCCGTATGAATGTGCGGTTTGCAACTACGCATTCACTACTAAAGCTAACTGTGAACGACATCTAAGAAACAGACACGCTAAGGTTACGAGAGAAGATGTGAAGCGCTCTATCATTTATCATCCATCAGAAGACCCTAACAATGATGAAGTCAACTCAAAATTAGCTAGAGATGATGTAAAACGATCTTTGGCATTCCAAACTCCTGAATTCGAGAGGCGCAGTGAAAGCTCTGGTCGCGATACTCCTTTGACTCATTTCACTCCAACTTTCATAACAGACAGGCATCCAGTTGCTTCATTAACTGCAAAGCCGTTACCAGAAACTCCCATATTAACTCCAAGAGAAACGGAACCAACTTTACCAAGAATCAAGGTAAAAGGCATCGGTCAACTAACTCAAATACCCGAATACAGGCCACCAGATATTCCATATAAGACGAATGACGTCCAATCTGATACGTACGATGAGGAAGTTCCAGTTGATCTCAGTACAAGTGACAACAACAGCTGTGACGTACTCGATCTCAGTAAGAAGAAGCGAGATACTGAAAATGATGAACCTAAAGCCCCACCGAGACCGTCCTTTGAACCTGACCCAGCCGCTGTTGCTGCTTCTACGTTTGAAAAGGCAAGACTTTTAATAGCCCAACAAAGACTTTTCGAAAATACTCTTCCCAAAATTGATCCCGCTTACTATGCAACTCAACTATCCCAACTCTATGCTGGTACAGTCCCTGGCATCCATGGGTTGCCCTTACCGCCGTCCTTTCCAATCAGCCCTTACTTTCTTCAACCCTCTTTTTTTCCTCACCCAACTGATTCCCAAGAACTTGCCGAAATAAAAGAACGCATACAAAAAGAAATTATACGTGGTCTAAGTATGTCTGGCGGCAGACTAGTCCCAAGTGACCAAGAGGCTCCAACTAAACAGGAGCCAGAAGAAGAAGACCAGAAGCCATTACCACAAACAATATCTCCCTCGCCATCTCCTCAGCCCGAATCTCCAAGGCCTCTGAGCAATAACCTCGTTTCTCAGAATGACTCCGTGAAAATGGTCATAAAAAATGGCGTGCTCAtgccaaaacaaaaacaacgacggtaccgcactGAAAGACCTTTTTCTTGTTCCCAATGCTCAGCTCGTTTCACTCTTAGGTCTAACATGGAAAGACATGTTAAACAGCAACATCCGCAACACTGGAGTGTCAGAAGACCAGCGCCAAGGGCTCCACCGCCATATCCAACATCTGATGCTTTAGCTGATCGAGTGAAATACGCACTGTTAGCCCGACATTTAGAAAGACCCTTACAACAACCTGATCGATCACCAATTCGTCGAGATTCCGATGAAGTTGCTGATAATGAAGAAGATGAAGATGATACTTTAGTCATAGATGAGGAACCTGAAGATCTCAAACCTGATGAGCATTCCGCTGCACATCGCGCTGCCGCTGAAATCTTAATGGCGACACGTCAGCAAGAGATTCATAAAGACTTCGACCTCAAAATTGCTGGAAACTTGATCAACAAACCGGTTCCTCCAACAAATGAGAAGACAGAAACGGGAACGGATCCTATTCAAGTGTCTGGGCACGATCCCGTCCCTGTGGTGCCGACCCGCAGCGATGAAGAGGAAGACGAAGAAGGTCTAGTCGCCTCAACTAGTGAAGGCAACAATTCTGGAAGCGATGAAAATAAATCTGAATCTGATACTGGAACTCAACCTCCGAAGAAGAAGTCCGCCTACAGCCTAGCACCAAACAGAGTTTCTTGTCCGTATTGTCATAGAAAGTTCCCTTGGTCCTCGTCGCTCCGACGCCATGTGTTGACGCATACCGGTCAAAAGCCTTTTAAGTGTCCGCATTGCCCCTTGCTCTTCACTACAAAGTCGAACTGCGACCGCCATCTGTTGAGGAAACATGGAGGATCTGCCAGAGCTATTCTAGCGGAGCCTATTCCTGACGCAGTGCCCCCACCGCAAACAGCACATGACACCAGAGCTGTACCCGAAAGGCCCTTCAAATGCGCGTCTTGTCCTAGTAGCACGTTCTCTTCAATGGACACTCTTAAGAAGCACATGTCTGCGCGGCACGGGCCAGTCGACTCGCGACCAGGGTCGCCTAATCCAGATGTCAATGATGACGCATCGGACATCAGCTTAGTCTTCAAGTGTCATCTGTGTGAGGCCTCTTTTGGGGAGAGAGGAGCGGCGTTGGGACATATGGCTTCTACTCATGCGGTGGAATATGAGCAACTAGTCAGCAAGGGTGCTTTAGATGCTGCTAGTGATAGAAGTGAAAGCGCTGACGATGATGAGAGAGGAAGGGTTCCTGATCACGTCAATAGAAAGGTCGTTTGTGCCTTTTGCGTCCGTCGCTTCTGGTCTGCGGAAGACCTCCGACGCCACGTCCGCACCCACTCAGGCGAGAGACCGTTTGCTTGCGACCTCTGTAGGCGAAGGTTTACACTGAAACACAGCATGCTACGGCACCGCAAGAAGCACAGGGAAGAGACTGATGACGAGGAAGCCTCGCCGCCTCATACACCTGTAGAGCCCGAAAATCTCGCTAATGGATATCGATACCAAGATGACGACGGCTCCGGAAACGAGATCCCTAGTAACGTTAACAACAACAACTCCCCCCCGTCTGCACCGTACGAGAAGAAGCTCAAACTCGACATGACGTCCCGCAAATACTCATCAGAGGCGGAGAACGACACTGAAAACGGTGGGGACCTTATTGGGAAGCTTCTGGGCATCCCAGACAAGACAATCATTAACAAACTGCTCTCTTCGGCGGACGAAGCCGCGAAGTTCCTCGGAGTAAACAAATGA
Protein Sequence: MQGAASAPAPPAAEPPSSQHIKTEEVITEAKVEAKEMDKMIEKQDLRPARTTSIDSDNRSDRSEEEDTRRSRKRAASTSPSPIPMDKRIARFECPKCRLRFDSANAFDLHRFTAHGEDTRTGFDDLTFVDFSRKKIPEIARGVCDRNAHISINEQRYRCDMCTRDFPCGEVLDIHRKTCTGATRITSPERDRREDFFAKLDLRNRSFGIPGTLTPPMDRFTPKFEDGHLTTNGIRHIDAARDLADIQSILNVTSAGSLLERLTGTRLPALESTVLTPPDTVGKDRDHEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDDVKRSLAFQTPEFERRSESSGRDTPLTHFTPTFITDRHPVASLTAKPLPETPILTPRETEPTLPRIKVKGIGQLTQIPEYRPPDIPYKTNDVQSDTYDEEVPVDLSTSDNNSCDVLDLSKKKRDTENDEPKAPPRPSFEPDPAAVAASTFEKARLLIAQQRLFENTLPKIDPAYYATQLSQLYAGTVPGIHGLPLPPSFPISPYFLQPSFFPHPTDSQELAEIKERIQKEIIRGLSMSGGRLVPSDQEAPTKQEPEEEDQKPLPQTISPSPSPQPESPRPLSNNLVSQNDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTSDALADRVKYALLARHLERPLQQPDRSPIRRDSDEVADNEEDEDDTLVIDEEPEDLKPDEHSAAHRAAAEILMATRQQEIHKDFDLKIAGNLINKPVPPTNEKTETGTDPIQVSGHDPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIPDAVPPPQTAHDTRAVPERPFKCASCPSSTFSSMDTLKKHMSARHGPVDSRPGSPNPDVNDDASDISLVFKCHLCEASFGERGAALGHMASTHAVEYEQLVSKGALDAASDRSESADDDERGRVPDHVNRKVVCAFCVRRFWSAEDLRRHVRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREETDDEEASPPHTPVEPENLANGYRYQDDDGSGNEIPSNVNNNNSPPSAPYEKKLKLDMTSRKYSSEAENDTENGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_00075956;
80% Identity: -