Basic Information

Gene Symbol
ZBTB41
Assembly
GCA_963576865.1
Location
OY756417.1:5745850-5756571[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 2 2.1e+02 3.8 0.2 1 23 248 271 248 271 0.89
2 9 0.0034 0.35 12.5 1.4 1 23 370 393 370 393 0.96
3 9 5.7e-05 0.0059 18.1 4.2 2 23 398 419 397 419 0.97
4 9 0.16 16 7.3 1.1 2 23 427 447 426 447 0.96
5 9 0.00019 0.019 16.5 0.8 1 21 453 473 453 478 0.94
6 9 0.00069 0.072 14.7 0.5 1 23 486 509 486 509 0.94
7 9 8e-05 0.0083 17.6 0.2 1 23 515 538 515 538 0.97
8 9 9.6e-05 0.0099 17.4 0.7 1 23 548 570 548 570 0.96
9 9 0.00027 0.028 15.9 3.0 2 23 577 599 576 599 0.96

Sequence Information

Coding Sequence
ATGGAGCAAGACGTAGATAATGGCTACAGGTCGGTGTGCAGTACTTGCCTGAGTAGCGACCGGGATATATTTTCGTTAAATGATATGCCTCAAGTGTATCATGTATTTTGTTTGCTCATGAACGATTTCGCGGGCGACAGATATGGAGACCCAACTTTAGAAGTCAGTCAATTTGTGTGTTGGGAATGTGTTGCACTCATGAAGCGTTTCGCCAAGTTCAAGAACCAAGTGCAGAACGCTCAAGACCACCTCCGAGTACTTGCAATGAGTAGATCTCAAGAGAGCATCCTGGACCACACATACATGTCCCAATCTTTATCCGGTTTGGAAGTCAGCAAAAAATTGGATTATGACAAGATATACTTTGACTACGCTCAGGAGACATGGCCGCATGAGTACATCCTGCCTATCACGGAAGACGTTAAGAGTGAACAGCATGATGCAATACGGAATAGCATCAGTCTAGACATTGATTCACAGATACTGGAAGtaCCTCAAATAGTCCTTGGGAACCCTGTGACTGGGGTCATGTCGCATATTGTAGTAAACACTGATGCGCTTATCACGCCGGCAGCTACATACACGCAGGTTAAAGATATCGCGACAATAGGCACTCCACAAATTGACGTCAAAAAGAAAAACGACCCGAAATGCAGTTACACAACTGAATACATGTCCGAGGCAGAAATGCTTCAAGTAAGAGAGgaaatgaaagaaaaagtaCAGTACGCAAGCTCTGTATACAAATGCGAGTTGTGTATCATTGGTTTCTACACCCAACAGCAAGTCGAAGATCATTTTGTATCGGACCACAGAGAAAAACCTGGAAAAACCTGTTGTAAAGTGTGCTACGTTTACGTGGATGATTCCACATTAGCAGACCACACTATGTCGCATTACGTCCGACACGTGTGTAAGTTGTGTGGGCATCTCAGCCACAGCACAAAGCAAATGACGTTGCACGCCAATAAACATGTTAATAAGACTCTTAAAGGAGTCATTGGCATCACCAAATCCAAGgaGAAAAAGGGCAAAACGGAAGAGAACAAGCCGCCTCCAAAAGCGGGGGACCTACGGAAGCTTCTCTCCAAGACTACGATCGAGGGCTACCAGTGCCTTGAGTGCGATATGTTCTTCAAGAATTCGAGGGCAAGAAAGAACCACGTAGCACGGTTCCACAGGGAAGGGTTACAGTGCGACCACTGCAAGAAGAGATTCGTCAACAGGACCACGCTTACGACGCATCTTAAaCTCCACGAGGGCCCGCTGCCGCGCAAGGAGTGCCCCGTCTGCCACAAGATGGTGCGCGTGATCCAGCTCAAGTACCACGTGCAGCGGCACGAGAACCAGCACCGCTACGAGTGCGCCGACTGCAACAAGATCTTCTCGCACCTCGCCACCTACCAGGCGCACCTCAAGTACAGCAGGGCGCACGCTTCTGATGAAGTCTTCAAATTCCCGTGCCCCATGTGCAATAAGGGGTACCCTACCAAAGAGTCGATGCAGGACCACTTCAACTACCAGCACCTTGGGAAGACTGCGCATAAGTGCCCTGTCTGCGAAAAGCCTCTGGCGTCCCGGGCCAACGTGGAGAAGCACATGATGCGAGTCCACGGCAAGAAGAAGGAGAAGCCACGGAACCACGTCTGTCTTGTTTGTAGGAAGGCCTTCACGGATAAGAAAGCCCTTAACCAGCACTTAGTAATCCACTCCGGAGAGAGACCGCTCTCCTGCGACGTCTGCCAACAGACGTTCAAGCATAAAGCATCACTATACACACATagAAAACGAGTTCACAAAGTGTTCCCTACGCGGCCGTCGATCGAGTACATGGAGACTAAGCCTCAGCAGCCTACATGA
Protein Sequence
MEQDVDNGYRSVCSTCLSSDRDIFSLNDMPQVYHVFCLLMNDFAGDRYGDPTLEVSQFVCWECVALMKRFAKFKNQVQNAQDHLRVLAMSRSQESILDHTYMSQSLSGLEVSKKLDYDKIYFDYAQETWPHEYILPITEDVKSEQHDAIRNSISLDIDSQILEVPQIVLGNPVTGVMSHIVVNTDALITPAATYTQVKDIATIGTPQIDVKKKNDPKCSYTTEYMSEAEMLQVREEMKEKVQYASSVYKCELCIIGFYTQQQVEDHFVSDHREKPGKTCCKVCYVYVDDSTLADHTMSHYVRHVCKLCGHLSHSTKQMTLHANKHVNKTLKGVIGITKSKEKKGKTEENKPPPKAGDLRKLLSKTTIEGYQCLECDMFFKNSRARKNHVARFHREGLQCDHCKKRFVNRTTLTTHLKLHEGPLPRKECPVCHKMVRVIQLKYHVQRHENQHRYECADCNKIFSHLATYQAHLKYSRAHASDEVFKFPCPMCNKGYPTKESMQDHFNYQHLGKTAHKCPVCEKPLASRANVEKHMMRVHGKKKEKPRNHVCLVCRKAFTDKKALNQHLVIHSGERPLSCDVCQQTFKHKASLYTHRKRVHKVFPTRPSIEYMETKPQQPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01281670;
90% Identity
iTF_00075982;
80% Identity
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