Basic Information

Gene Symbol
-
Assembly
GCA_963576865.1
Location
OY756417.1:914274-938223[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 2.9e-05 0.003 19.0 1.5 2 23 221 243 221 243 0.96
2 13 0.015 1.5 10.5 0.3 1 23 274 296 274 296 0.97
3 13 0.8 83 5.0 0.9 2 23 305 326 304 326 0.93
4 13 0.25 26 6.6 1.4 6 23 336 354 333 354 0.93
5 13 0.18 18 7.1 0.4 1 19 360 378 360 380 0.96
6 13 0.0076 0.79 11.4 0.5 1 23 386 409 386 409 0.95
7 13 9 9.3e+02 1.7 0.0 2 20 419 437 419 439 0.91
8 13 0.0025 0.26 12.9 0.6 1 23 446 468 446 469 0.94
9 13 0.0083 0.86 11.3 0.5 2 23 475 496 475 496 0.95
10 13 0.0022 0.23 13.1 6.0 1 23 541 563 541 563 0.97
11 13 0.1 11 7.8 3.5 1 23 569 591 569 591 0.96
12 13 0.00052 0.054 15.1 0.3 1 20 597 616 597 617 0.94
13 13 1e-05 0.0011 20.4 0.8 1 23 625 648 625 648 0.95

Sequence Information

Coding Sequence
ATGCCAGTGCGCGCTTGCCGCGGCTGCCTGGCAACAGAACCAAAGTTGTTcaacatttacaaaaacaacTTGCACGAAGCCTTCGGAGAAGTTGTTGGGAATCCGATATTCGAATCGGACGACCTCCCGCAACACATCTGCGCCGCGTGCTACGCGCAGCTGATGAAGTTCGTCTCGTTCCGCGGCCGCTGCCTGCTGGCGCAGGACCTGCTCGAGGACCTCAAGCTGCAAGGGGTTAAGTTAACGACAAGTTTCGTTCGAAATATCGACCGTAATAAATGCAACTTGCTTCCAAATCTCAAGAAGGTGACACCACCAATTGCAGACCTGATTATACAAGAACAACTATGCGATGAGCCAGTGCCTTTGCCTCAGGACGACGCAGGGCTAGACCAGGACCACGAGCCAGCTGACCCTTGGTCTCCTCACGACATGATTGTATTTTGCCTAGAAGACGACCCATTGTCCAAATCcactaaaaaaatcaataaaaaaaaaacatcaaagcCAAAAAAGTTTCCCGATTTCAGTGACCCGATAAAAATTGAAGagtttaagaataaatattacatggATGTACAGGTTTTGACGAAAGAGGAGCGGATTGAAGATATCAAGAAGAAAATCCTCGATAGTTCTACTAGAGTTAGCGGAGCGCCTTACTGTTCTTACTGTGGCAAAGTCTTCGTGTCAGAGGCAACACTGCAGCAGCATATTAAGAAATGCCATGACGAGTCGGTCGGGACGGTTCAGTGCGAAGTATGCAGATATCGTTTAAAATCAGACACACTTTCTTCGCatgcttgtaataaaattagattCACATGTAATCAGTGTGGTGTATCGTTCATTAACTTTTATACGGCAATAAGCCACGCCCGTGGACATGGTGTTGTGCCGGCCTTAAACAAGAGATGCAATTACTGCCAATTAGTTTTGGATAAGAAAGAATTAAAAGCACATGTCTATAGTAAACATCCTAATCAACTTGAATGGTGCAGATGCTGTGGAGAATCCTTCATGAATGGATCCGGTCTGAATACACACATGTTAAGACTTCACGAAGAATTTTTGAAGCATCAGTGTCAGAAATGCAGCATCAAATTTGGAACCGTTGAAGCATTGGAGAGACATTCATCGTTGACATGTGAAATCTTCAACTGTGTGATGTGCGGTGAACATTTTGAAACTGAGTTTGAGTTGAAAGATCATGTGATTAAAGAACATTCGAGAAGTGAATATATAAAGTTAGCGCAATGTGATAGTTGTGGTGTAAAGTTCTTCGGTACTGATCCGCTGGTGAAGCATCTTGAAGAGAAGTGCTGTGGGAGTGGGCACCCGTGCCTAGTGTGCGGGCTAAATTTCCCCACTGCGGAGTCTTTGAACGACCACAGGAATGAACATCACCCTAATCGGTACCGCGTTTGTGAGAGTTGCGACAAAGCGTTTGACGCCGACAACTATCGCCACCACATATCCCGTGTCCACAACATGAAGCCGCCGAAGTGTCAGaaagGGTCAGGTATATCCACCCGCACGGCGCCCAAACGCTGGTCGGTGCACGGCTGCATCATCCGCGGCGAGGAGGCCGCGCCCGCGCGGGCCCCGCCCCCGGACACCCACATGTGCCACTACTGCGGGAAGACTTTTATGaaGGCCCAAAATATGAAGCTGCACACACGCCAACACACGGGAGAGAGGCCGCATGTGTGCAAGACTTGCGGACACGGCTTCATGCGGAAGCAAAACTTAATATTTCACGAGCGGGTGCACACCGGCGAAAAGCCGCACGCGTGTAACCTCTGCCCCAAGAGGTTCCGCGTCCGTTCTGCGCTCAACCGACATTTGGTGTGTCATACTGAGCTCCGTCGTCACGTCTGTCAAGTCTGCGGCAAAACGTTCCGTACGTCGTCTTCTGTCAAGATTCACATCAAGGGGGTGCATCTAAAAATGCCAGTTAAGGGTCCAAAGAAAAACCGTTCAAACACAAATATCGTAACGACCGATAACAAAACAAACGGCAATAACGAGTCACAGAAACAAGATTTAATGGACAGTGACAATAAAATCcctattaaaaagttaaaacgaCCGAGAAAACGACGCGTGCAACAAACGGACGGACAAATTGAGGGTTTAATGGACACAATGAGTGATATAACACAAGGTGGGGTCTATGACACTGACAGCGTGGTTACGGACACGAATGCACCTCGCATCATCAAGACGGTTAATGTAAAGCgaaaaagaaaacttaagaATAGTTTACCCACGATAGATTTGAAGGGCTGTGGCCCAGTAACTCAAGATTATAAGGACAGCGAAGCATACGCCTCGGCTAAATCCACTGCAGTTAAAATTCTCAAAGCGACCATTAAAAAGCcaaatataattgcaaaaaaatttaaacacaaACTTATGGACACAAGTAAACAGTATCAAGAGttaatcattacaaaaataccAGCAGCAGGTGTGTCTAGTAAAGCAGAACAGGTACAGCAGAGCGGAAAAGCTAAAGAAGTGGTAGAGTTAGAACCTTCAGGGCAGTTAGCAGGACAGCAACAATTAGCTGGCCCGTCGGGCCAGACGGCAAAGCAACAACAATCAGCCGATCTTCCAGGTCACTCAGCAGAGAAACAGATTCAGTTCAAAAATCAAGGCTCATCCAGCAAACTAGACGAAatgttgaaaaaacaaacagcaAATTTCAAAGCATTTATCAGAACAGTTGCTAGCATTGACGTTGACATCCTAACCGACAAATGGGAGTTCGAGGATGCCTTAAAATCATTACAGTCGAGATGGGTGGCTATCGATTGCCTTCATTGGGAAATCGATAGCGAGCAAAACGGGCAAGACGAGAGTTACGAGAGAATCTACACTAAGTATGAGAAGAAATATACAGAATTGAAGAAAGCAATTAACACTAAACTATGGTCTGTCTCACACAGAGATAAATCAACACCACTATTAGACATTCCTATATTTTACGGCCCTAACCTTCAACAAGATTTACAAATGTTAATTCTTAAATTCAGACAATATCCTTATGGTTTCACAGCAGATATAGAGAAAATGTACAGGCAAATTAAAATAGCAGAAGAACATCGAAAGTATCAAAAAGTGTTGTGGAGAGAAAATGAAGATCAACCTATTCAAATATATCAATTAAATACAGTCACATACGGCACAAAAGCCGCCCCCTATTTAGCAATGATGACATTACAACAATTAGCATCTGATGAACGGGACTCTTTTCCTGAAGCTGCACAGGTTGTGGAACATTCTTTTTACATGGATGACTTAGTCCATGGGGCCTACTCATTAAACGAAGGAAAACAATTAatagaaaaattacatttattattgcaaaaaggCGGCTTCAACTTGAGAAAGTGGTCGTCGAACAATCGTAATCTATTAGATAATATTGAGAGTAAGAGTGACGAACAAGAAATATTCAATTTCAAGTcacaaaataaatctaaaattttaGGCTTATTTTGGGACGCTACAGAAGATAAATTCATGTTTGAAATTAACATTAATCAAGCATTGAGTTCACCGACCAAGCGACAACTTTTATCTGAAATATCAAAGATATTCGACCCCCTAGGTTGGTTAGCACCCGTTACAACAAAACTTAAATTGATGTTTCAAAAAGTATATGTTCTTGGATTGCAGTGGGATGACGTCATACCGAATGATATAGCTAGCGAGTGGGATAGGTTACGACTAgacattaaaaacataaatgactACAAAGTACCacgatggatggatggatgtaaCAAAGACGACGTCATCCAATTACATGGTTTCTGTGACGCATCTTCGCAAGCTTATGCTTGTGTAATATACGCCAGGattgaaaaattacaacaaGTCATAATAGTCGCGGCAAAATCTAAGCTTGTTCCCCCCACCAAAGGGTTGACTATACCACAACTGGAACTATGCGCTGCCGACTTATTAGCAAAATTAATGACAAAGGTACTAGAGAGCTTAAATCAAcataacattgttatttttggCTGGAGTGATTCCAAAGTCGTACTAGCATGGTTGCAAAATTCAGACAACAAATGGAAACAATTCGTTGTTAACAGAGTGAAGAATGTTGTCAAGGTCATGCCAGCTGATTGTTGGCGTTATGTAAAATCTGCGGAAAATCCTGCAGACTCAGCAAGCAGAGGTCAATTACCGTCACAGTTGAAAGAAAACACCTTATGGCTCAGTGGCCCCACTTGGTTATCTActtatcaaaaagaaaaaaaaagcagcACAGAGATCTATACTACAAACGAAGAAGCGAAGAAATCTCAGCAAAGCAATGTTATTACGCAGTCCGTAACGGATGATTCGATTATCAAGCAGTTATTAGTAAAGCACAGTTCACTTTCGCGCGTTATTCGTATAGTAGCATGGATAAAGAGATTTATTAACAAGGAAAAAGCAAGGCAAGCATACTTATCATTAAATGAATTAAGACAATcacaattattaattgttaagcACATACAAAGCGAAGCATTTAAAGAAGAAATAAGCAACTTACAAGCAAAGAAAAGCGTATCTACAAAAAGCACAATATCAAAACTTAAACCTTACCTTGATGAAGCTGGCATCTTGCGAGTTGGAGGGAGGTTGGAAAATGCGCATATTAACATTGAGATGAAACACCCAATTATAATACCTAGCGAGTCTCGGTTATCAGAGCTTATTATAGACCATGCGCATAAACTCACCTTCCACGGTGGAGCAAGACTGACCAATGCCTTTATCAGACAAAAATATTGGATCGTCGGTGGAAACAGATTAACAAAAAAGCAAATACGATTATGTGTGACCTGTAGAAGAAACGATCCTAGCAAACATCACCAAATTATGGGCGATTTACCAACAGCGCGAAGTAATCCCTCAAGGCCTTTCTATCACACAGGAGTGGATTACACAGGACACgttttcataaaaacaaacaaaggtaGAGGAACGAAAACCACTAAGGGCTACATAGCGGTATTCATATGTATGGCTACCAAGGCCGTACATTTGGAACTAGTTTCCGACTTAACGTCATCAGCATTTCTCGCGGCGCTAAAACGAATGGCTGCCCGAAAAGGAACCCCTGGCCATTTGTACAGTGATCAGGgcactaattttataaaagcaaaTCGGGTTTTACAAGAAGAGTTTGTAGAATTATCTAAAACAAATCaagattttataaaagaactaacTGAAATAGGTATAAATTGGCATTTTAACGTACCCTCTTGGCCTTCAGCAGGCGGAGTTTGGGAGAGTGCAGTTAAAAGCCTAAAATATCATCTGAAGCGAGTAGTTGGCGATCAAAAACTGACCTACGAAGAATACAGTACAATATTGGCTCAATTAGAAGCATGCCTAAACTCAAGGCCTTTATGTCCATTATCAGAAGACCCCGATGACCTCAACTTTTTAACTCCATCTCATTTTTTGACTCATGGACCTACATTATCACTTTACGACACAGAACATGATTTACGTACAAGGTGGCACTTAGCACAAAAGATATTTGAAGATATCTGGAAAAGATGGCGCAGCGAATATTTAACGCAATTAAACATACGCAGTAAATGGACGCGACCCCAACGCAATATCCAGATAAATGACGTAGTCATTATTCACGACGCCAATCTACCAGCTGGGAACTGGGCCCTAGGACGGGTCGTGGAACTTCATACAGGTGCTGACGGTTTTGTCAGAGTTgtgacattaaaaacaaaaaacgggTTATTAAAAAGGCCAATCGTCAAATTATCTGTACTACCAACTAAACCAGTGAATTCCAACAACGATGAACACATCGAAAATCAAGACACAGCAATTGACGAAAACACATcaagtaacaaacaaaaaagaaaatataaacaatcgAAAAAGGGATTTTCTCTAGCAACAATGATAATGTCtctgttattattattcataaccAATTTCTCGCCAACAGAAGGCAAATACAACATTACGTCACTACAAAGTAACAAAAGCTTGTATTTTGACAAAATTACAAACATGTACCTTATTAGAGACGACTGGAAGCTGATAGTATACTACGACATGGAACCTTACTCGGAAGGTAACCGTGCCTTCtctaaacatttaaattacctTGAAAACATCTGCACAAAGATAAGAACAGAATCACATTGCGAAGCGATAATGTTGCAACTACGTCACGGTGACGCAGAACTGGAGTACTACAACCGCATGTTGCTAAGTCAGCATTTTGGAGTTCATTCACGCCGAAGGCGCGGCCTTATCAATGCATTAGGCAACGTAGCAAATAGTTTGTTCGGAGTACTAGACGACCGTTTTGCAGAACAATATGAAAAAGACATTggacttattagaaaaaatcaaaaacatctGGCTACACTGTGGAAGAAACAGACATCGGTCGTGGAAGCTGAGTTTAATCTTCTACAAAGAACAAAAGATATAATGGACAAACAACATAAATTTGCAAATCAGAGAATGTTGGATCTAGAAAACAATCTAAACGCATTGAAAACAAAGCTACAAAATATGTCTAGTATCAACGACTTTACCTTATCTGCATTAATAACGAACAATATGCTTATACATCTACAAAGTATACAAGACAATATTTTAGACACTCTAACTGATATTTATAATGGAAAAATTAACTTACACCTACTAACACCCGATCAACTAAGCAACGAACTTAATATAATTTCAAGCAAATTACCAAGTGATTTATCTTTACCTGTCTATACTGCAGACTTAACTACAATTTATAAGTTATTAAAGGTAAAAACGAAGATCACTAAGAACTACGTATTATTTGAGATCAAAATACCACTCATTAGCAGAGACCTATACGATATTTTACGAATTATTCCCATACCTAAACAATTAAACGACACAATGACGTTCCTAAAACCTGTAACTGAATATGCTGCAGTTAACCTACAAAGAGACGCATTGCTTTCCTTATCAGAGAATGACTTGAACTCTTGCTTGCATTTAGACACTGAAACAAGTTTATGCTATCTAAAACGACCAATATATCACATCAAAGATGACGAGAGCTTGTGCGAAACTCATAAAGATTCTAGAACATGTCAAGCCACGACAACTTTCTGCTCAAATAAATGGGaagaattaaacaaaattaacacttatttctatttttgttgtggCGACTGTACTCTACAGCTGATGTGCGAGGATCAAATTACTACGCTGCAACTAAAGCTCGCCGGCCTGCTGATTGTGAGTCACGGTTGTATTATCAAATCGaaagactttattatttatccaCACAGACAAGATGCGAGTAGCATGAACATAAAAGCAAACATAGAGTCAATTGACATAGCACCAATCAATCACTTATTCAATCTTCAAATTAGTAACTTAAGCTCATCAAATATGTCAGACCATGACGCAAACGATCAAAAAACACAAATGGCTGAAATTAGAAAGCAAATTGATACGATGAAGCAAACTATACCTTTAAGCGATGAAATATCGAATCATGACATTCATCATTATGCTGCTATATACATCGTGATTATCATCATTGTAGTGGGTGGAACAGTCTTAGTGTGGAAGCGATATCGGAAATGGGCAATCTAG
Protein Sequence
MPVRACRGCLATEPKLFNIYKNNLHEAFGEVVGNPIFESDDLPQHICAACYAQLMKFVSFRGRCLLAQDLLEDLKLQGVKLTTSFVRNIDRNKCNLLPNLKKVTPPIADLIIQEQLCDEPVPLPQDDAGLDQDHEPADPWSPHDMIVFCLEDDPLSKSTKKINKKKTSKPKKFPDFSDPIKIEEFKNKYYMDVQVLTKEERIEDIKKKILDSSTRVSGAPYCSYCGKVFVSEATLQQHIKKCHDESVGTVQCEVCRYRLKSDTLSSHACNKIRFTCNQCGVSFINFYTAISHARGHGVVPALNKRCNYCQLVLDKKELKAHVYSKHPNQLEWCRCCGESFMNGSGLNTHMLRLHEEFLKHQCQKCSIKFGTVEALERHSSLTCEIFNCVMCGEHFETEFELKDHVIKEHSRSEYIKLAQCDSCGVKFFGTDPLVKHLEEKCCGSGHPCLVCGLNFPTAESLNDHRNEHHPNRYRVCESCDKAFDADNYRHHISRVHNMKPPKCQKGSGISTRTAPKRWSVHGCIIRGEEAAPARAPPPDTHMCHYCGKTFMKAQNMKLHTRQHTGERPHVCKTCGHGFMRKQNLIFHERVHTGEKPHACNLCPKRFRVRSALNRHLVCHTELRRHVCQVCGKTFRTSSSVKIHIKGVHLKMPVKGPKKNRSNTNIVTTDNKTNGNNESQKQDLMDSDNKIPIKKLKRPRKRRVQQTDGQIEGLMDTMSDITQGGVYDTDSVVTDTNAPRIIKTVNVKRKRKLKNSLPTIDLKGCGPVTQDYKDSEAYASAKSTAVKILKATIKKPNIIAKKFKHKLMDTSKQYQELIITKIPAAGVSSKAEQVQQSGKAKEVVELEPSGQLAGQQQLAGPSGQTAKQQQSADLPGHSAEKQIQFKNQGSSSKLDEMLKKQTANFKAFIRTVASIDVDILTDKWEFEDALKSLQSRWVAIDCLHWEIDSEQNGQDESYERIYTKYEKKYTELKKAINTKLWSVSHRDKSTPLLDIPIFYGPNLQQDLQMLILKFRQYPYGFTADIEKMYRQIKIAEEHRKYQKVLWRENEDQPIQIYQLNTVTYGTKAAPYLAMMTLQQLASDERDSFPEAAQVVEHSFYMDDLVHGAYSLNEGKQLIEKLHLLLQKGGFNLRKWSSNNRNLLDNIESKSDEQEIFNFKSQNKSKILGLFWDATEDKFMFEININQALSSPTKRQLLSEISKIFDPLGWLAPVTTKLKLMFQKVYVLGLQWDDVIPNDIASEWDRLRLDIKNINDYKVPRWMDGCNKDDVIQLHGFCDASSQAYACVIYARIEKLQQVIIVAAKSKLVPPTKGLTIPQLELCAADLLAKLMTKVLESLNQHNIVIFGWSDSKVVLAWLQNSDNKWKQFVVNRVKNVVKVMPADCWRYVKSAENPADSASRGQLPSQLKENTLWLSGPTWLSTYQKEKKSSTEIYTTNEEAKKSQQSNVITQSVTDDSIIKQLLVKHSSLSRVIRIVAWIKRFINKEKARQAYLSLNELRQSQLLIVKHIQSEAFKEEISNLQAKKSVSTKSTISKLKPYLDEAGILRVGGRLENAHINIEMKHPIIIPSESRLSELIIDHAHKLTFHGGARLTNAFIRQKYWIVGGNRLTKKQIRLCVTCRRNDPSKHHQIMGDLPTARSNPSRPFYHTGVDYTGHVFIKTNKGRGTKTTKGYIAVFICMATKAVHLELVSDLTSSAFLAALKRMAARKGTPGHLYSDQGTNFIKANRVLQEEFVELSKTNQDFIKELTEIGINWHFNVPSWPSAGGVWESAVKSLKYHLKRVVGDQKLTYEEYSTILAQLEACLNSRPLCPLSEDPDDLNFLTPSHFLTHGPTLSLYDTEHDLRTRWHLAQKIFEDIWKRWRSEYLTQLNIRSKWTRPQRNIQINDVVIIHDANLPAGNWALGRVVELHTGADGFVRVVTLKTKNGLLKRPIVKLSVLPTKPVNSNNDEHIENQDTAIDENTSSNKQKRKYKQSKKGFSLATMIMSLLLLFITNFSPTEGKYNITSLQSNKSLYFDKITNMYLIRDDWKLIVYYDMEPYSEGNRAFSKHLNYLENICTKIRTESHCEAIMLQLRHGDAELEYYNRMLLSQHFGVHSRRRRGLINALGNVANSLFGVLDDRFAEQYEKDIGLIRKNQKHLATLWKKQTSVVEAEFNLLQRTKDIMDKQHKFANQRMLDLENNLNALKTKLQNMSSINDFTLSALITNNMLIHLQSIQDNILDTLTDIYNGKINLHLLTPDQLSNELNIISSKLPSDLSLPVYTADLTTIYKLLKVKTKITKNYVLFEIKIPLISRDLYDILRIIPIPKQLNDTMTFLKPVTEYAAVNLQRDALLSLSENDLNSCLHLDTETSLCYLKRPIYHIKDDESLCETHKDSRTCQATTTFCSNKWEELNKINTYFYFCCGDCTLQLMCEDQITTLQLKLAGLLIVSHGCIIKSKDFIIYPHRQDASSMNIKANIESIDIAPINHLFNLQISNLSSSNMSDHDANDQKTQMAEIRKQIDTMKQTIPLSDEISNHDIHHYAAIYIVIIIIVVGGTVLVWKRYRKWAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-