Basic Information

Insect: Anania hortulata
Gene Symbol: -
Assembly: GCA_963576865.1
Location: OY756410.1:5523725-5526376[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.5 1.6e+02 4.1 0.1 5 23 368 386 367 386 0.95

2 12 0.15 16 7.3 0.3 3 23 394 414 392 414 0.87

3 12 0.57 59 5.5 0.2 3 23 423 443 422 443 0.95

4 12 3.8e-07 3.9e-05 24.9 1.0 2 23 449 470 449 470 0.98

5 12 0.004 0.42 12.3 3.8 1 23 476 498 476 498 0.98

6 12 0.00017 0.017 16.6 0.3 1 19 502 520 502 522 0.95

7 12 0.00046 0.048 15.2 0.2 1 23 556 579 556 579 0.95

8 12 0.0028 0.3 12.7 0.3 2 23 587 608 586 608 0.96

9 12 3.5e-05 0.0036 18.8 0.3 1 23 619 641 619 641 0.98

10 12 5.9e-05 0.0061 18.0 4.3 1 23 647 669 647 669 0.98

11 12 0.0032 0.33 12.6 0.3 3 23 677 697 675 697 0.98

12 12 4e-05 0.0041 18.6 0.8 1 23 703 726 703 726 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.5	1.6e+02	4.1	0.1	5	23	368	386	367	386	0.95
2	12	0.15	16	7.3	0.3	3	23	394	414	392	414	0.87
3	12	0.57	59	5.5	0.2	3	23	423	443	422	443	0.95
4	12	3.8e-07	3.9e-05	24.9	1.0	2	23	449	470	449	470	0.98
5	12	0.004	0.42	12.3	3.8	1	23	476	498	476	498	0.98
6	12	0.00017	0.017	16.6	0.3	1	19	502	520	502	522	0.95
7	12	0.00046	0.048	15.2	0.2	1	23	556	579	556	579	0.95
8	12	0.0028	0.3	12.7	0.3	2	23	587	608	586	608	0.96
9	12	3.5e-05	0.0036	18.8	0.3	1	23	619	641	619	641	0.98
10	12	5.9e-05	0.0061	18.0	4.3	1	23	647	669	647	669	0.98
11	12	0.0032	0.33	12.6	0.3	3	23	677	697	675	697	0.98
12	12	4e-05	0.0041	18.6	0.8	1	23	703	726	703	726	0.96

Sequence Information

Coding Sequence: ATGGATACGTGGTCAAATCTTTGTCGGTGCTGCCTGTCTTCAAATTCTACAATATCTCTACTGGATGCAGATCAAAGCGTTGCGCTGAAGTTTCATGAGATAACAACTATAGAGGTGAGAGAAGAAGACGGCCTGCCTCAGAAACTTTGCGGTGAATGCTATGTGATACTAAATTCAGCTCATCAATTCCGGAAACAGTGTATCAAAATGGATATTGAATTAAAACAACAGCTACAAGCACTATTACAACAGGCTAGAGATCAGTACAACTCAGAATCATGCCTTGAAGATAACATGGAAGAAgaagatgaagatgaagatgaCATAGCTAATGATCCAGTCAAACAACTAGAATCAATAATAAAGAAAGAACCAATAGATAGCGATGATGACTGCTATTATGTTCTCGTTATTGATGACCCCAAAGACCAGGAGGATGAACACACAGAAATCCAAAAATCAAATACTCAACTCAACCCAGAGCCACCATCCATCAAAGTTGAGCATGCTGACACTCTACAAGAAACAATTGAGCACCGAAATGAACCATTGGAAGAATTCAGTAACCAAACTCAGAATCAGTTCGAAAATACTGTTGATTCATTTTTGGTTTCCAATACAAAAATCCCTGTTAATGTTCCTGCTACAATATTAGAGAATGAGGAAGAGAGTcaagataatgatgataattacaACAATATTATGGAGACAGACACTCAAGATAGCCATACACAGGATCAAGTTTTACAGGAAATAGGTCATGGTCAGTCACAAACAGAAGTCCAGACTTTCACGGGCAATATAATAAGTAACCTACCCAATACtaagaattttattaaaatattaacaacaaCGGGTAGTGATGGGACAATACTTTTGAAGGGTACTGATGGCATTGAGTATATCACTGATTCACAGTTTGTTgcaaatgctgatgatgatggcgATCAAATGGATCAAGaagaagttattttttgtgaagGTGATGATTCATCCCAATATCAAATCCTTAAGTGTGAGGGTTCAGAATTAGTAATTGAGTATGCAGACGACAGTCAAATTGCAACTGTTATGCAGCAAGAAGATGGCACGTTTCTTTGTGACTGCGGAGAGCAGTTAGAAGATTTAGCTGAATATGAAAAACATCAGTATAAACATAACCCTGCTGGTGAACACCTCTGCAATTTATGTGGTAAAGGTTTTGAATCTGCTCAAATATTGACAGGCCATACACTACTTCACAGTCTCACTGGGCCATTACTCTTATGTCCATTTTGTAACCAACCTATAAGAAGAAATGCCTTGACACAGCATATCAAGTATGCCCACAATAACATAAAGCCTAAATGTAGCATCTGTTTCAAAACTTTTGCCAACCCAAACAATTTGAAACGCCATATGATGATCCATAGTGGGATCAAAGAATTTGAATGTGACATTTGCTTCAAACAATTCCACCAAAAAATCTCCATGCAGACACACAGATTAACTCATATGAATCCCTATTCCTGCAACCAGTGTGATGAAACATTTGAGAATAAAGATGATTTGGCTACACACAAAGATGATGGCAGTTGTAGTAAATCGAAAATCACTAGAGTGAAAAACGAGCTGTTGAAGACTGTGAAACAGGAGATCACTACAAGTATTGGCAAAGTAGTTGGCTATGCTTGTTCCTTGTGTAAGAAAATGTTCTCATTGGAGTCTGCATTAGAACAACATGTGGAGAGTACACATATGATAGATCCGAGTGAATTAATATGTTCAGAATGTGGTGAAGTTTTAACTTCTAAAAAAGAAAAGCTCTCTCATATGTCGACACATAAACATGCTAAGAATAGAAATATAAAGAGATTTGAATGCAGTGTATGTGGCAAAGGCTGTTCGAGCCAGGCAATGCTGATTATGCATGAAAGAGTCCACACAAATGAGAGACCTTATCCTTGTCAGTTGTGCTCTCTCCGGTTCAAGACAAAGACACATTTACGGACACACCAACTGACACATACACGAGAGAAGAAATTTGGGTGTTCTGTGTGTATGAAGTTCTTTGCATTGAAAGGGAACTTAGTAGTACACCTGAGGACTCATACAGGAGAGAGACCATACATTTGTTCTTTGTGTGGCGAAGCGTTTATagattctaaatatttaaaaaagcacAAGTTAAAGAAACATTCTATAGAAAATGTGCCGtggaataaatattaa
Protein Sequence: MDTWSNLCRCCLSSNSTISLLDADQSVALKFHEITTIEVREEDGLPQKLCGECYVILNSAHQFRKQCIKMDIELKQQLQALLQQARDQYNSESCLEDNMEEEDEDEDDIANDPVKQLESIIKKEPIDSDDDCYYVLVIDDPKDQEDEHTEIQKSNTQLNPEPPSIKVEHADTLQETIEHRNEPLEEFSNQTQNQFENTVDSFLVSNTKIPVNVPATILENEEESQDNDDNYNNIMETDTQDSHTQDQVLQEIGHGQSQTEVQTFTGNIISNLPNTKNFIKILTTTGSDGTILLKGTDGIEYITDSQFVANADDDGDQMDQEEVIFCEGDDSSQYQILKCEGSELVIEYADDSQIATVMQQEDGTFLCDCGEQLEDLAEYEKHQYKHNPAGEHLCNLCGKGFESAQILTGHTLLHSLTGPLLLCPFCNQPIRRNALTQHIKYAHNNIKPKCSICFKTFANPNNLKRHMMIHSGIKEFECDICFKQFHQKISMQTHRLTHMNPYSCNQCDETFENKDDLATHKDDGSCSKSKITRVKNELLKTVKQEITTSIGKVVGYACSLCKKMFSLESALEQHVESTHMIDPSELICSECGEVLTSKKEKLSHMSTHKHAKNRNIKRFECSVCGKGCSSQAMLIMHERVHTNERPYPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYICSLCGEAFIDSKYLKKHKLKKHSIENVPWNKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01280657;
90% Identity: iTF_00075799;
80% Identity: -