Ahor033923.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756415.1:8600670-8613152[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.21 22 6.9 0.0 3 23 127 147 125 147 0.96 2 14 0.002 0.21 13.2 2.8 1 23 254 276 254 276 0.99 3 14 1.7e-05 0.0018 19.7 0.4 1 23 282 305 282 305 0.97 4 14 0.0036 0.37 12.4 3.2 1 23 310 333 310 333 0.94 5 14 0.00015 0.015 16.8 0.7 2 23 493 514 492 514 0.97 6 14 8.5e-05 0.0089 17.5 2.4 1 23 520 542 520 542 0.98 7 14 0.7 72 5.2 7.1 1 23 602 624 602 624 0.96 8 14 0.0053 0.55 11.9 3.8 1 23 659 681 659 681 0.95 9 14 0.00024 0.025 16.1 1.3 1 23 687 709 687 709 0.97 10 14 0.00062 0.064 14.8 2.1 1 23 718 740 718 740 0.98 11 14 0.00036 0.037 15.6 0.4 2 23 787 808 787 808 0.96 12 14 0.021 2.2 10.0 6.3 1 23 825 847 825 847 0.96 13 14 1.8e-06 0.00018 22.8 0.7 1 23 853 875 853 875 0.98 14 14 6e-07 6.3e-05 24.3 3.1 1 23 881 904 881 904 0.98
Sequence Information
- Coding Sequence
- ATGAATCATAACATGGTTGAAATGGATCCCCTAAGCTCGTATGAGTACCCTGGATATGATAGTTACAATCCTGGACCTCCTGTGCCACCAATGATCCCGGCATTCAACTATGACGTTAAAATGGAACCTGCACCTCTGATgaatccggaatttttcaacCATTTCTTGCACAACGTCCCAGATAATAACGTAAACCAAGAGAAAGTACTTACCAACCTCAACGAGGCACCAAATATAAATAGTGAtgcacaaaattttaataacgacAATGATGTAAAACCTGTAATTcagacaaaaattaaaaaagagaaATTAAGAGGAAAGAGGAGCAGTTACTGGTCAGAAAAAATTACTGAtgatagttttaagttttatggttGTGCTATATGCAATGTTAGTTACCCATCGTTAGCTGAGCTAGACCAACATGTAACAATACACAAAGATAGAATAACTAGctatgatttaaaaattaagaacttgatgaaaaggaaaaaactgaaaaaagaacaaaaaaagttaaaaaagctCAAAGGGAAAGTTAAAAAAGAGGAAAAACCTGATTTAGATATACCAGAAATCAAACCGGAAGATGGTTATATAGGGAATGAGAAAGCAGCGGAATATAACGGTGATAGTTCAAACCAGAATAACGAAAATCAACCGTCAAATAATACTGATGACAAAAAAGATGTGAAACCAAATTGTAGTGATGAAAGAAATGATTTAAACACATCAGATAAGAACTTAGAGAAAATCTATAAATGCTTTGCGTGTCAAAAACAGTTTACCctcagttattatttaaaacttcacGTCAGATCTCACACagATGAGAAACCTTACACATGTTCGATCTGTGGGCAATCTTTCATAACGGCGAGCAAACTGGGGAGGCACAACAAGAGAATACACCTCGCTGTGCGATACCAATGCAGGATATGCTATAGATACTTCTCTAGATTCGAAAATTTAACCGTGCACTTTGATAAAAAACATTCCGAGGATAAGTTGGAAGGAGAGCCTTATGATTTCAACGCAATCCTGCCCTATCTCAAAGAACTAGAGGAGCAATTACGAGAGAAAGCAGAGAACGAAGCTAAACCCAAAACGGAAGACATATGGGGTGACGAGTGGGACCCCAGTCAACCCCAGGATAGCAGCATCAACATTGTGCCTAAGGATGAAGACGACAAAGACTTCGAACACCCCCCGCCGGATACCATAAACATTCTGATTGAAGAAGTGAAAGTGGACCCACCCGATGTGGACATTAAACGAGAATGCGAGGACGAAGACGGTGTCCCGGAGGATATGGACACATCCCACCCGGCGGATGACAATGACAGCGTCAAGGATGAAAGAAACTCTGACGACGATTATTTCCCATCCAACACCTGGGCAGCCTCCCCCAAAATTGAGGACGCCCCTCTCTCCCCCCCACGGGTCAAACGTTCCAAGGGGGATGGACCCCTAAAATGTGATGTTTGTTCGAAAACTATCAGCACGGTGTCATACATGAGAGTTCATATGAGAACCCATACGGGTGAGAGGCCATTCAAGTGCTACGTATGTGGGAGAGGGTTTATTACATCTAGCAAGATGCACAGGCATGTCCTGACACACCAGGAAACGTGGGAGGgcgACGAAGCTCCAGTGAAAGTTGAAGACGTGAAGCCCGAAGTAGATGACAAAGACAAAGATGTTAAATTGGATAAGaaGAGTCTTATAAAGAAAGCGAAAGCGAAATTCAACAAGAAACCGAGTCCAGGAGAGAAGCAGAAGAAGTACAAGAAGCGGCCGCACGCTTGCGAGTTCTGCCACAAACGGTTTCTGCATCTGGAGACGTTacagGTACATAAGAAATCCCACGAAGGGGAAGACTTAGTGATGAAGTGTAATTTCTGCTTGGAGACAATGTTGGATGAGCCAGCTCTAAGGGAACACGAAGCCACGCACACAGGACCGAAGCCCTACCTCTGCACCATATGTGGGAAGAGCTACAAGAAGCGGGAAACTATGGTATACCACCGCAAGCATCACAAGCCGGACAAAGACTACATATGCAATGTCTGTTCCAAATCCTTCAACGCGCCTTGCAAGCTGCAACGTCATATCGTCAGCCACAGAGCAGACAAATTCGTGCTAAGATACGAGTGTCCGGTCTGTGCGCATATGTTTAACACTAAATACCACGTACAAATGCACCTCGCCACGCACCAGAAAGAAGGACTCATCATGGAAGAAAATCGCAACGAAATCTTAGCAATGGTACTCCAAAACGCCCGGAAAATACCAAAACAATCCGACGGTAGTGCGAACCTAAGCGACCTGATACCATCCGACGAGCGGTCCCGGGTCTGCAACATATGTGGCGAAGTTTTCCAACATTTCTACTATCTAGAAGAACATTTAAAAGGCCACGGCTCAAGAATAGCCCTTGAAGACATCTCGAAACCGGAGGAAAAGAAACATGTATGCCAGGTATGTAACAAAAGCTTCAAACTCCACTACTATTTGAAACTCCACAGTTTTACACACACTAAAGAAAAACCATTTATATGTCAGCAGTGTGGTAAAGGCTTTATAACTAAAGGAAAACTCAAAAGACATTTAGAAACTCATACCGGTCTCAAAAAATACCAATGTCATATATGTTACAAATTCTTCACTAGACCGAGCTATCTTAGGATACATGTGCGGACTATTCATGGTAACCAAGACTACAATTTTAGGATAGATAAAGATTATAATGTAGGCTCAATGAGTTCTATGACGATGATGAGTCAGTCCAGCATTTAA
- Protein Sequence
- MNHNMVEMDPLSSYEYPGYDSYNPGPPVPPMIPAFNYDVKMEPAPLMNPEFFNHFLHNVPDNNVNQEKVLTNLNEAPNINSDAQNFNNDNDVKPVIQTKIKKEKLRGKRSSYWSEKITDDSFKFYGCAICNVSYPSLAELDQHVTIHKDRITSYDLKIKNLMKRKKLKKEQKKLKKLKGKVKKEEKPDLDIPEIKPEDGYIGNEKAAEYNGDSSNQNNENQPSNNTDDKKDVKPNCSDERNDLNTSDKNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSICGQSFITASKLGRHNKRIHLAVRYQCRICYRYFSRFENLTVHFDKKHSEDKLEGEPYDFNAILPYLKELEEQLREKAENEAKPKTEDIWGDEWDPSQPQDSSINIVPKDEDDKDFEHPPPDTINILIEEVKVDPPDVDIKRECEDEDGVPEDMDTSHPADDNDSVKDERNSDDDYFPSNTWAASPKIEDAPLSPPRVKRSKGDGPLKCDVCSKTISTVSYMRVHMRTHTGERPFKCYVCGRGFITSSKMHRHVLTHQETWEGDEAPVKVEDVKPEVDDKDKDVKLDKKSLIKKAKAKFNKKPSPGEKQKKYKKRPHACEFCHKRFLHLETLQVHKKSHEGEDLVMKCNFCLETMLDEPALREHEATHTGPKPYLCTICGKSYKKRETMVYHRKHHKPDKDYICNVCSKSFNAPCKLQRHIVSHRADKFVLRYECPVCAHMFNTKYHVQMHLATHQKEGLIMEENRNEILAMVLQNARKIPKQSDGSANLSDLIPSDERSRVCNICGEVFQHFYYLEEHLKGHGSRIALEDISKPEEKKHVCQVCNKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGNQDYNFRIDKDYNVGSMSSMTMMSQSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00075854;
- 90% Identity
- iTF_00075854;
- 80% Identity
- -