Ahor023067.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- ZFX
- Assembly
- GCA_963576865.1
- Location
- OY756403.1:18500493-18507448[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 4 4.1e+02 2.8 0.4 6 23 285 303 285 303 0.95 2 14 0.086 8.9 8.1 0.5 2 23 314 336 314 336 0.95 3 14 3.2e-07 3.3e-05 25.2 0.7 2 23 363 384 363 384 0.97 4 14 7e-07 7.3e-05 24.1 1.8 1 23 391 414 391 414 0.97 5 14 0.017 1.7 10.3 0.1 1 23 420 442 420 442 0.95 6 14 2.4e-05 0.0025 19.3 1.6 1 23 448 470 448 470 0.98 7 14 0.00013 0.014 16.9 6.9 1 23 476 498 476 498 0.99 8 14 0.047 4.9 8.9 2.9 1 23 626 648 626 648 0.96 9 14 0.00024 0.024 16.1 2.0 2 23 655 677 654 677 0.92 10 14 1e-05 0.001 20.5 3.8 1 23 683 705 683 705 0.97 11 14 1.3e-06 0.00013 23.3 4.6 1 23 711 733 711 733 0.98 12 14 0.0013 0.14 13.8 0.9 1 23 739 761 739 761 0.96 13 14 9.2e-05 0.0095 17.4 3.5 1 23 767 789 767 789 0.95 14 14 0.00033 0.034 15.7 1.2 1 23 795 818 795 818 0.96
Sequence Information
- Coding Sequence
- ATGAACAACGAAACTGAACAAATATTTCTGCTTAATCCAACTGAAAATCAGCCGTCTACAGCGTCTCAGAAACTAGAGGGAACCTCTATTGCACCACAAGatGTGGAAGACTTCTCTACAGTGTGCCGGACCTGTGCCACAGTCACGGAATTCGTCATCCCTATATTTGATGGGGAGGGCCTCCAAAACAACTTTGCTGATaaaatacacaaacatttgcctattcagGTATCAGAGACGGATGTTCTCCCGCGAGTGGTGTGCTACCAGTGCGCCAGCACGCTGCTGGCCTGGCACGAgctggtgcagtgctgcgtgcAGGCCGACGCCGCGCTGCGCACGCGACTGGCTGTGGCCGCTGCCGCTGACAGCGCCAGGACCACAGAGATAACTgaATCCAAATCTGGCATTaaagaaattgtacaaaattcAGAACAGGGACAAACCAAattCAATACCGAATTTTATACTGTGTTAAAAGATATATTAGTGAGTAACTATCCCATGATCACTGGAGATAGTTTTGACACCCAGATTGTATGCCTGCAATGCAAGACTTGCCCTCCTTCAAGCAGTATTGAACAGCTAGCTGGTCATCTACAATCTTCCCACCAGTTTAGGGTCGCAAACCAAGCTGCCATTAAAAATTTCATTAGTAACTACATGACATTTGAGGAAACATTAATATCTGAAGACTCAGACAGAGATATGCAATCAGACTCCAACGATAAACCCGAAGCTATACCTAATTTCTATTGCCCATTCTGCGAAAGCATATTTTCCTCCATGACGCGACTGCTATGTCATCTTAACCAACACCTCGAGGTGTCAATAGAAGATGGAGTGATGTGCTGCGAAAAAATTTACGATACCAAGAAAAGGTTCGTTAAACATTTACAAGAGAAACACGTCACGCGGGTCGTGGACGAGTCTAAGAATACTTGCCGAACTTGTGGCTTCCAGACTGAAACACTACAGAATCTACAGGATCACGTATTACGCGCTCATTGCAACAAGGGAGAATCTCATAAAAATCCTGAAAGCAGTAATAGCAAAAGCGAATTGAACCAGAAATTCATTCCGGCCGTGTGCCCAGAATGTAATAAAGTATTTTCCAATAAGTATAACATGTTTGTTCATATGAAGAGTCACAGCAAAGAGACGGTAAAGTACAAATGTGACAAGTGCAATAAGACATACAGCAACCAGGGCAACTTGAACAACCACAGAAAACTAGCTCATGCGGGAATCCtgaattttgtttgcactacCTGCGGCGAAGCGTTCCCTTCGAGAGTAGCACGCGACGTTCACTCACGCATCCATACCGGGGAAAAACCTTACTCGTGCGAGCACTGCCCAAAGTCGTTTAGAGCCAAGAACACACTCGACCGGCACATAGAGATGCATTTAGACATAAGAAAATACGAGTGCCACCTCTGTCCGAAGAAGTTCAGAAAGAGGACGCATCTCAATTACCACCTAAGCACGCACAAGGAAGACGCGAAAACGTGCGATGATACGCAATACGATAGTCAAGGAAACAGCAGCAACGAATCGAATAATGAAGACGATGAACCTCTGTCCAGTATAGCAAGCAAACAATCTGCAGATGTGTACAAGAACTTTTACAACGCTCTTGTTAATTTTAGAAACCATTTCGTGAATGACCATTCGTCGCATAAAACCAAGTATCTAGAACATACGGTGTCAAGCGATTCTGAAATAGTGAGTGACGAGGAAACAGAGACTGATGAATTGAATCTACAAAATTACGACGACCTAACGGATTGTAATATGAGGAAAGATCGGATGGACGAAAAGACACGATTGGAACTGAGTCAGGTGCAAACTAAAATAAACGGAAAAGTCTTCTACACTTGCCAGATATGCGGAAAGAATTTGAGTTCGTCGCACACTTACGTATTTCACAAGCGCATCCACACCGGCGAGCGGCCGTGCGTGTGCCACATATGCGGTAAACAGTTCAGAGCGCCCAACGGGCTACAGCGGCATCTGACGGAGACGCACGAGCGAATGCGACGCCACTCGTGTACGATGTGCTTCAAGAACTTCGCAAATTCTCAAAACTTGAAACAGCACATGCGCATTCATACCGGCGAGCGGCCGTTCGTGTGTACCCACTGCGGGAAACGGTTCACGCAGAGCGGGTCCTTACACGTCCACCTGAAAACGCACACTGAGCAGTTTCCGCACCAATGCGCAGAGTGCGGAGCGAAGTTCAGATTACGATCGGGGCTAGTTAGGCATAATTTGAAACACACTGGAGAGAGACCTCACGTGTGTGTGTTCTGTGGTAAAAGCTTCCGGCAGAGGCACGAGCTGACCAACCACGGTCTATCCCACAGCGACTCTAAGCCTTACTCCTGCCTAGTGTGCGGCGCCGCCTTCCGGCAACGAAGAGCGCTTCGTCACCACAATAAAAGAGTGCACGAAGTCGACGTTCCCCCTAGAGATATCACTCATCCTCTAGTTTATACTCACGTtgcaaattattaa
- Protein Sequence
- MNNETEQIFLLNPTENQPSTASQKLEGTSIAPQDVEDFSTVCRTCATVTEFVIPIFDGEGLQNNFADKIHKHLPIQVSETDVLPRVVCYQCASTLLAWHELVQCCVQADAALRTRLAVAAAADSARTTEITESKSGIKEIVQNSEQGQTKFNTEFYTVLKDILVSNYPMITGDSFDTQIVCLQCKTCPPSSSIEQLAGHLQSSHQFRVANQAAIKNFISNYMTFEETLISEDSDRDMQSDSNDKPEAIPNFYCPFCESIFSSMTRLLCHLNQHLEVSIEDGVMCCEKIYDTKKRFVKHLQEKHVTRVVDESKNTCRTCGFQTETLQNLQDHVLRAHCNKGESHKNPESSNSKSELNQKFIPAVCPECNKVFSNKYNMFVHMKSHSKETVKYKCDKCNKTYSNQGNLNNHRKLAHAGILNFVCTTCGEAFPSRVARDVHSRIHTGEKPYSCEHCPKSFRAKNTLDRHIEMHLDIRKYECHLCPKKFRKRTHLNYHLSTHKEDAKTCDDTQYDSQGNSSNESNNEDDEPLSSIASKQSADVYKNFYNALVNFRNHFVNDHSSHKTKYLEHTVSSDSEIVSDEETETDELNLQNYDDLTDCNMRKDRMDEKTRLELSQVQTKINGKVFYTCQICGKNLSSSHTYVFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTETHERMRRHSCTMCFKNFANSQNLKQHMRIHTGERPFVCTHCGKRFTQSGSLHVHLKTHTEQFPHQCAECGAKFRLRSGLVRHNLKHTGERPHVCVFCGKSFRQRHELTNHGLSHSDSKPYSCLVCGAAFRQRRALRHHNKRVHEVDVPPRDITHPLVYTHVANY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -