Ahor033313.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756415.1:3333498-3335875[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.018 1.9 10.2 0.9 1 21 77 97 77 98 0.96 2 17 0.032 3.3 9.4 0.1 2 23 126 147 126 147 0.95 3 17 0.0054 0.56 11.9 0.5 2 23 170 191 169 191 0.97 4 17 0.013 1.3 10.7 0.1 1 23 195 217 195 217 0.95 5 17 0.043 4.5 9.0 0.3 1 20 222 241 222 245 0.79 6 17 0.32 34 6.3 0.3 3 23 253 274 251 274 0.94 7 17 0.0026 0.27 12.8 1.8 1 23 281 304 281 304 0.97 8 17 3.7e-06 0.00038 21.8 0.4 3 23 313 333 311 333 0.97 9 17 5.8e-07 6e-05 24.4 2.4 1 23 339 361 339 361 0.98 10 17 3.3e-05 0.0034 18.8 0.7 1 23 364 387 364 387 0.98 11 17 0.0058 0.6 11.8 0.1 1 23 465 488 465 488 0.95 12 17 0.83 86 5.0 0.3 2 23 515 537 514 537 0.94 13 17 0.0029 0.3 12.7 0.7 1 23 559 581 559 581 0.99 14 17 2.1e-06 0.00022 22.6 0.7 1 23 585 607 585 607 0.98 15 17 0.012 1.3 10.7 0.8 1 21 641 661 641 664 0.90 16 17 0.0036 0.38 12.4 0.4 1 23 671 694 671 694 0.94 17 17 6.7e-05 0.0069 17.9 1.6 1 23 701 723 701 723 0.98
Sequence Information
- Coding Sequence
- ATGAAGAAATCTCTGACAccaaattttctatttttaggACGGCGCGGACAAACTGTGATAAAGGTAGAGGAAATGGAAAATATACCAAATCAACTAGAAAATTGTACACCTGACAAACGGCGCTACCAAAGAAGCGCCAGAGCTGAAGCTCGCATCATTATAAAGAAGAACGCTAGTGCAATTCTGGAGTGCTGGTCGGCCTGTCCTTTTAGATGGAAAAAGAACAGATTCAAGTGTGCGTACTGTGAAGCTAACTTCACTGAGTGCAACTCACTTAGAGAACATGTCAGATTGTGCGCTTCCAGGCACAGCGTCAAGGATATCTACAGTAAATTCAAGGAAATGCCTCTTATAAACATTGATGTTATCGAAGCTCGCTGCAATATTTGTTCTGCGCCATTTACAGACGTTGGTCAGATGCGGGAACATGTTATCCAACACGGCTATGCTTTTAATCCTAACCACCCTGACGGGGTCTTGCCCTTTGCACTCGATAAAGAGTCGTGGAAATGTGTTATATGTCAAGAAAAGTTCAACAACTTTCTCAAACTTTACGAGCACATGAATGTACATTATCAGCACTACATATGCGCCACTTGTGGCAAAGGCTACATGACGGCACCAAGATTAAGGAAGCATTCAGAAGTTCACATTTCGGGATCGTTTCCATGCAACGAGTGCGGAAGGATATTCACAATGCGGGCAGCTAGAGATTCTCATAAAGCCCATGCACACGCTAAGGGACCTCGTTATGGCTGTCCCCATTGCAGCCTCCGGTTTGAAGGATACTACGAGAGGATGGCTCACTTAAACGAAGCTCATCGAGAAAAAGAAGTGTTGTACAGTTGCTCCCACTGTGAATTGAGTTTCAAGACGAGTGGGAAGCGAGCAATGCACGTAAGATCTGTACATTTTCCTCCTCAGAGAGATTACGGGTGCCCGTACTGCGAGTGGCAATTTAAAACGAGCTATGAGTTAAAGAGGCACATGGTCAGACATACAGGTGAAAGGAATTTTCATTGCAATGTTTGTGGGAAGTCATTTCCAAGAAATAGAGCTTTGACTACACATCTTAAAACACACGAAGAGTTCAGTTGTAAATGGTGCGCGACTATTTTTAAACAGCGGTCTCAGCTGCTTGCCCACGTACGAACTAATCATCCTCATTTGGgttCCGCTAGTGCGGATATGGAAGCTAACGTAAGCATTGTAAGATGCGGTAGGAAGGTAAAAGAAAAGGTTAGCGAACGACAGATGCGCAGGCGACGCCGCGCCAACAACGAACTCCCAGAGGAATCGGAAAAACGCATCGCGAAAACTATGATGCGACGAAACGCTATGGCGCTTTTAGAATTTTCCACTGCGTGGGCGTTTAGATGGTTTCATGGCGTTTTCTATTGCTCCTACTGCGATGCTAAGTTTGCTGATATTGATCCTCTGAGGGAACACGTTATCGTGTATCACTCAAACGAACCGCCTACTAAACGAGTTTTCGCTAAAATCACTGAAAATAATATGCTCAAAATTGATATTGGTAATCTTTCCTGTAGGCTTTGTAATAACTATGTAGACAGTTTGGATGAGTTGAAAAGTCATTTGCtatcatttcataaaaaagCTCTGAACTCTGACTACAGTGATGGAGTTTTACCGTTCAAACTGAGTAACGATGGTTTTCAATGCCAGATTTGCCAGGCACAGTTCGAATCCTTTCCAAAAGTAAATCAACACATGAATACTCATTATCAAAACTATATTTGTGATGAATGTGGCAAAGCTTTTGTGTCGAAATCTCGATTCCGTAGGCATGTGCAGTCGCATGAGGTTGGGAGGTTTCCCTGTGGGGAATGTGATGCGATACTCCTTACAAGAGTAGAACGTATGTGCCATAAGTTGAAAGTGCACAAAAAAGGTATGAGATATTCTTGTCCACGGTGTTCGCAATCGTTCACAAGTTACTACGCTCGAGCTAAACATTTAGTAGATCAACATGGACAACAGAAAATAGACTACAGGTGCCCAGCTTGCGGAAAAACGTTTGAGACGGGGTCGAAACGCGCAGCACATTTTCGATTAACCCACGCCAATATTGAAAAGAAGTATGACTGCACTGAATGTCTTTCGACATTTATTACTAAATCTAAGCTTCAGAGACATCAATTGACCCACATGAAGAAGGAATCGCAAAGATAG
- Protein Sequence
- MKKSLTPNFLFLGRRGQTVIKVEEMENIPNQLENCTPDKRRYQRSARAEARIIIKKNASAILECWSACPFRWKKNRFKCAYCEANFTECNSLREHVRLCASRHSVKDIYSKFKEMPLINIDVIEARCNICSAPFTDVGQMREHVIQHGYAFNPNHPDGVLPFALDKESWKCVICQEKFNNFLKLYEHMNVHYQHYICATCGKGYMTAPRLRKHSEVHISGSFPCNECGRIFTMRAARDSHKAHAHAKGPRYGCPHCSLRFEGYYERMAHLNEAHREKEVLYSCSHCELSFKTSGKRAMHVRSVHFPPQRDYGCPYCEWQFKTSYELKRHMVRHTGERNFHCNVCGKSFPRNRALTTHLKTHEEFSCKWCATIFKQRSQLLAHVRTNHPHLGSASADMEANVSIVRCGRKVKEKVSERQMRRRRRANNELPEESEKRIAKTMMRRNAMALLEFSTAWAFRWFHGVFYCSYCDAKFADIDPLREHVIVYHSNEPPTKRVFAKITENNMLKIDIGNLSCRLCNNYVDSLDELKSHLLSFHKKALNSDYSDGVLPFKLSNDGFQCQICQAQFESFPKVNQHMNTHYQNYICDECGKAFVSKSRFRRHVQSHEVGRFPCGECDAILLTRVERMCHKLKVHKKGMRYSCPRCSQSFTSYYARAKHLVDQHGQQKIDYRCPACGKTFETGSKRAAHFRLTHANIEKKYDCTECLSTFITKSKLQRHQLTHMKKESQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00961180;
- 90% Identity
- iTF_00075779;
- 80% Identity
- -