Ahor033312.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756415.1:3327514-3333444[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 2.9 3e+02 3.3 0.2 2 23 57 78 56 78 0.92 2 32 3.6 3.7e+02 3.0 0.0 2 23 103 125 102 125 0.88 3 32 0.0013 0.13 13.8 0.8 1 23 147 169 147 169 0.98 4 32 0.0017 0.18 13.4 5.6 1 20 173 192 173 195 0.95 5 32 0.054 5.6 8.7 0.2 1 23 200 223 200 223 0.95 6 32 0.039 4 9.2 2.0 1 23 229 252 229 252 0.93 7 32 0.015 1.5 10.5 0.2 1 23 258 281 258 281 0.97 8 32 0.34 35 6.2 0.0 1 23 327 349 327 349 0.95 9 32 1.4 1.5e+02 4.3 0.2 2 23 373 395 372 395 0.94 10 32 0.74 77 5.1 3.2 1 23 417 439 417 439 0.92 11 32 0.0018 0.19 13.3 0.1 3 23 445 465 444 465 0.97 12 32 0.0048 0.5 12.0 1.8 1 23 474 497 474 497 0.93 13 32 0.0019 0.2 13.3 0.8 1 23 503 526 503 526 0.97 14 32 0.087 9.1 8.1 1.5 1 23 532 555 532 555 0.96 15 32 0.00018 0.019 16.5 0.4 1 23 561 583 561 583 0.97 16 32 6.1e-05 0.0063 18.0 0.5 1 22 589 610 589 610 0.97 17 32 5.3 5.5e+02 2.5 1.3 1 23 682 705 682 705 0.94 18 32 0.24 25 6.7 0.0 3 23 729 750 727 750 0.94 19 32 0.016 1.7 10.4 4.7 1 23 772 794 772 794 0.97 20 32 0.00062 0.065 14.8 1.2 1 23 798 820 798 820 0.98 21 32 0.051 5.3 8.8 0.1 1 23 825 848 825 848 0.94 22 32 0.00026 0.027 16.0 2.4 1 23 854 877 854 877 0.98 23 32 0.26 27 6.6 1.7 1 23 884 907 884 907 0.94 24 32 4.6 4.8e+02 2.7 0.3 1 23 1026 1049 1026 1049 0.88 25 32 0.00025 0.026 16.1 2.4 1 23 1070 1092 1070 1092 0.99 26 32 0.0019 0.2 13.3 0.6 1 23 1096 1118 1096 1118 0.98 27 32 6.4e-05 0.0066 17.9 0.2 1 23 1123 1146 1123 1146 0.96 28 32 0.088 9.1 8.1 2.7 2 23 1153 1175 1152 1175 0.96 29 32 1.3e-05 0.0014 20.1 0.5 1 23 1182 1205 1182 1205 0.98 30 32 3.9e-05 0.0041 18.6 0.4 1 23 1211 1233 1211 1233 0.98 31 32 8.1e-05 0.0084 17.6 1.3 1 23 1239 1261 1239 1261 0.98 32 32 1.6e-05 0.0017 19.8 5.2 1 23 1267 1289 1267 1290 0.96
Sequence Information
- Coding Sequence
- atgaatttgttttttataggaCCAGAAGATACTCAACAGAAGAAATCACAATCATCAGTGAAGGTTAAGTGGAAACGAAAACGCAGAGTCGATGAAGACAAAGCTAACGCTGCTATGATCTTGCAGTATTCAAACGCAGTGCCATTTAGATGTCAGCGTGGGAAACTCATGTGTGCATATTGCCAGACTAACTGCCCAGACATGATAGAGTTAAGGTTGCATTCAGCGATCCATGACAAATTGGATGTACTGGAGAATCCTAACGTCCGCATTTCTTTTCCTCTCAGAATCGATATTTCTGATTTGGTTTGCACAATATGCAATGAAATTTCGCTGTCATTAAAAGATCTCCAGGTTCACTTAAGTGCAGTTCATGCTAAAATTATGAATCAAAATTACAGTGATGGTGTTATACCATTCGTGCTAACCAGCAAAGAGTACAAATGCGTTTTCTGCGGAATAATGTTCGAAAGGTTTCTGTCTCTGTTCGTGCATATGAACAACCATTACCAGAGTTATGTATGTCATACATGCGGCAAAGGGTTTTCTGGGAAACACAAACTACGAGCTCACCAAACATGTCATGAATCCGGGGAATTCGCATGTCCCAAATGTGATTCGGTATTCCTAAATCGTGCTTCCAAAAACAGGCACATGTCAGTTGGACATGGACCCAAAGAGAGATATCGCTGTCCCGTTTGTGATGTGCATTTTGACTCGTACCATTCCCGATTGAGGCATTTAGATCTAATACACGGTCAAAAAGTAGAGTATCGCTGTAACTTGTGTCCTGCTGTATTTGGTAGCAGCACGCTTAGGTACTCGCACATGAATATCGTTCACTTGCGAAAGCGCAaaggCTCCGTCGACAGCAATCTTAAATGGAAACCAAGGCGCAAGTTTAACGATCACAGAGACAATGCAGCCATAATCATTGAGTGTTCGAACGCGTGTCCGTTTAGGTGGAAACGAGGAGCGTTCACCTGCGCTTTCTGTCCTCTCTCGTTTGGAGACCTCGCTGGTGTCAAGGAACATACCATAGAACACCCTAATAGAATAGAAGTGCTGCGGTACGCGAGACAGACCGACAGCATTAAAATTGATGTCACAGGACTTAGATGCGAACTCTGTCTCCAAGAAATGAAAGATGTCGACACTCTCAAAGATCACTTGCGTATTACACATAACAAACCGATAAAGCAGAATATCCAATCAGGCGTTACCCCCTTCGTAACAGATGGCAAAGAATTCATCTGTACTCACTGTGATCAAAGATTTGAATTGttctcaaaaataaatacacacaaCAACCAGCATTATCCCAACAACATTTGTTTTGAATGCGGCAAAGCTTTTTCGGCTGCGCAAAGACTGAAGGCTCATTTACTAATACACGAGACTGCTAATGATAGTGCCGAACATAAATGTACAAAATGTGATCGGGTTTTCGCTACACGCGTATTGAAGAATAATCATTTAACCTTAGTTCATGGACCCGAATACAGATACAGATGTCCGTATTGTAAGGATTCGTTCAAACGGTACGGAGACAGAGCCAAACATTTAAAAGTAGCTCACGACCAGAAAGTGGAATATCCGTGCCACCTATGCCCGGCCGTATTTGCGTTGTGCAATCAAAGGACTAAGCATATTCAACAGGTTCATACTCGGCTTAAGCAGTTCTATTGCATGATGTGTCCGTATCAATTCGTTACTGCAGCACAACTGAGGAACCACATGGTCAAACATGTCGGAGAAAGAAACTTTCAATGCGAAGTTTGCAAAAAAGCTTATCCGAGACTAAAGACTTTAAAGGAACATATGCgaAAATCTGGACGTGTTCTAATTGCCGATGAAGGCAGAGAGATTTGCACCGTGCAGGCTGACAGGCAGGATATCTCTGTGTCAACAGAGATGATTGCTGCTGCACTTTTATCCTCACCGCGAGAGATGGGCGATAAGAAACGTACCTTATTCAGAAAAAACATTACAGTTCTAATAGAATCTTCTACGGCTTACCCTTTCAAATATAGAAAAGGGACCTACTTGTGTTATTACTGTAAAAGCACATTTCTAGAGCCGGAAAAACTACGGGAACATAATAAAACGCAGCATGCCAACGTCCAGATAACAGTTAAACCAAGGAAGTATGAACCCTTAAAAATGGATTTCACGTTGACGGCTTGTAAGCTATGTGGCGTCGATATACCTGATTACGCTAATCTGAAAATGCATTTGAAAGCTGAACACGATAAAACTATTGACTGCACCTACGGAGAATGTGTGCTACCTTACAAATTGAGCAAAGACGAATACTGCTGTCAGATATGCGGGAAGCGATACGAGATGTTTCTCAGTCTACATAGGCATATGAATGAACACTATGGGCAATATATTTGTGAAAATTGCGGAAAGAATTTTGTAACTCTACATAGAATGGTGAATCATGCTCGAACTCACGAGCGTGGAGTATTCCCTTGCAGACAATGTAAAGAGACCTTCCCTTCTTATGCCGCTATGTACGCTCACGTAGCCAAAATCCATAGGTCTAACAAGCGGTACAAATGTCCTGTTTGTGATGAAAAATTTTCTTCTTACAAACACCGTGTGAAACACTTGAGTACGGTTCACGGGGAGAAAACTGCGGTATTCCCTTGTGCGTTATGCCCAAAAGTCTTTGATCTATGTAGCCGTAGGACATCTCACATAAGGTTTCAGCATCTTCAAGAGCGCAATCACGTCTGCCACGAATGCGGTGATGTCTGCGCAACGACCGACTCTAAAGTTAAAGTGATATACGGccaaaacaaatcaaacaaaGAGAGCGGCTCCGAATGCAACCAACAGAAGCTAATCGGTGGAAATAGTACAGTGGCTCTTATAACCAGCTCCAACGCTGTCCCCTTCAAGTGGctgaataatttttatttatgctttTATTGCGAGGACAAATTTCTGAACTTTTCTGAATTAGAACACCACAAGTCAACTAAACACCAAGTAACCGAGGAACTTATAACGAAGTCTCTCGTCGGGCTTGGAAaataccaaaaagttaaagttaattttataagttttgaatgTAAACTCTGCACACATGTCGCAGAGGATTACTTTGGACTAATAGACCACCTTGGGTTGAATCACAAGATAAGACTGAACGTCAACGTGGATAATGTTGTTCCTTATCGCATCGACTCAGACGGATTCAAATGCGCAGTGTGTTCACAGAGTTTCCATAACTACGGGTTACTCAATCGGcacataaataaacatttttataacttCGTTTGCACACAGTGCGGTGTCAGTTTTGCTAATGACAAGCGCTTAAAACTTCATACGCAAAGCCATGTAAATGAAGTATATACATGCGAGCTTTGCGGCAAAGTTTTTAGTAAAAGGGCTACAATGAAGGACCATGTCGCGAGAATTCACATGAACCGTAAAAAGAACAAATGTACCCACTGCGAAGAAACGTTCAAAGAATACCGCCAGAAGATAAAACACTTGGTAACTGTGCACGGTGTCAAAGTGCCAGAATTCAGATGCACGATGTGCCCCAAAGTGTTTTCAATAAGTGGAGAGTTGAAGTCTCATCAGAACAGaattcatttcaaaataaaaaactacgaGTGCGATTTGTGCCAAAAGAGATTCGTTAATGCAGCTTTCCTCAGGAATCACATGGTCAGTCATACTGGCGAGAGGAATTTCGAATGTCAAGTGTGCAAAAATAGGTATAAGCGCAAAAGTGCATTGGATAGTCATATGCGGATTCACAACAACGACAAGAGATATGTCTGTCAATACTGCAGCAAGGCATTTGTACAAAATTGCAACTTGAAGAGTCACGTCAGGACCCATCATAAAGATGAAGTCATTACTTAA
- Protein Sequence
- MNLFFIGPEDTQQKKSQSSVKVKWKRKRRVDEDKANAAMILQYSNAVPFRCQRGKLMCAYCQTNCPDMIELRLHSAIHDKLDVLENPNVRISFPLRIDISDLVCTICNEISLSLKDLQVHLSAVHAKIMNQNYSDGVIPFVLTSKEYKCVFCGIMFERFLSLFVHMNNHYQSYVCHTCGKGFSGKHKLRAHQTCHESGEFACPKCDSVFLNRASKNRHMSVGHGPKERYRCPVCDVHFDSYHSRLRHLDLIHGQKVEYRCNLCPAVFGSSTLRYSHMNIVHLRKRKGSVDSNLKWKPRRKFNDHRDNAAIIIECSNACPFRWKRGAFTCAFCPLSFGDLAGVKEHTIEHPNRIEVLRYARQTDSIKIDVTGLRCELCLQEMKDVDTLKDHLRITHNKPIKQNIQSGVTPFVTDGKEFICTHCDQRFELFSKINTHNNQHYPNNICFECGKAFSAAQRLKAHLLIHETANDSAEHKCTKCDRVFATRVLKNNHLTLVHGPEYRYRCPYCKDSFKRYGDRAKHLKVAHDQKVEYPCHLCPAVFALCNQRTKHIQQVHTRLKQFYCMMCPYQFVTAAQLRNHMVKHVGERNFQCEVCKKAYPRLKTLKEHMRKSGRVLIADEGREICTVQADRQDISVSTEMIAAALLSSPREMGDKKRTLFRKNITVLIESSTAYPFKYRKGTYLCYYCKSTFLEPEKLREHNKTQHANVQITVKPRKYEPLKMDFTLTACKLCGVDIPDYANLKMHLKAEHDKTIDCTYGECVLPYKLSKDEYCCQICGKRYEMFLSLHRHMNEHYGQYICENCGKNFVTLHRMVNHARTHERGVFPCRQCKETFPSYAAMYAHVAKIHRSNKRYKCPVCDEKFSSYKHRVKHLSTVHGEKTAVFPCALCPKVFDLCSRRTSHIRFQHLQERNHVCHECGDVCATTDSKVKVIYGQNKSNKESGSECNQQKLIGGNSTVALITSSNAVPFKWLNNFYLCFYCEDKFLNFSELEHHKSTKHQVTEELITKSLVGLGKYQKVKVNFISFECKLCTHVAEDYFGLIDHLGLNHKIRLNVNVDNVVPYRIDSDGFKCAVCSQSFHNYGLLNRHINKHFYNFVCTQCGVSFANDKRLKLHTQSHVNEVYTCELCGKVFSKRATMKDHVARIHMNRKKNKCTHCEETFKEYRQKIKHLVTVHGVKVPEFRCTMCPKVFSISGELKSHQNRIHFKIKNYECDLCQKRFVNAAFLRNHMVSHTGERNFECQVCKNRYKRKSALDSHMRIHNNDKRYVCQYCSKAFVQNCNLKSHVRTHHKDEVIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -