Ahor033362.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756415.1:3682710-3693154[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.18 18 7.1 0.2 1 23 72 96 72 96 0.91 2 27 0.093 9.6 8.0 0.6 1 23 167 189 167 189 0.96 3 27 0.00072 0.075 14.6 0.2 1 23 193 215 193 215 0.96 4 27 0.041 4.3 9.1 0.2 1 23 220 243 220 243 0.90 5 27 2.3 2.3e+02 3.6 3.2 2 23 251 273 250 273 0.91 6 27 0.001 0.1 14.2 1.7 1 23 280 303 280 303 0.97 7 27 0.00036 0.037 15.6 6.5 1 23 309 331 309 331 0.97 8 27 3e-05 0.0031 19.0 2.4 1 23 337 359 337 359 0.99 9 27 1 1e+02 4.7 0.9 3 23 433 454 431 454 0.95 10 27 0.18 18 7.1 0.4 2 23 524 545 523 545 0.97 11 27 0.00012 0.012 17.1 0.1 1 23 549 571 549 571 0.98 12 27 0.34 35 6.2 0.7 1 19 576 594 576 596 0.87 13 27 1.2 1.2e+02 4.5 4.1 1 23 606 629 606 629 0.95 14 27 8.2e-05 0.0085 17.6 0.4 2 23 649 671 648 671 0.96 15 27 0.00015 0.016 16.8 1.4 1 23 677 699 677 699 0.98 16 27 0.00039 0.041 15.5 0.6 1 23 705 727 705 727 0.99 17 27 1.8e-06 0.00019 22.8 0.4 1 23 733 756 733 756 0.97 18 27 0.0032 0.33 12.6 0.9 3 23 824 845 822 845 0.93 19 27 0.042 4.4 9.0 0.0 2 23 870 892 869 892 0.95 20 27 0.04 4.1 9.1 0.5 2 23 915 936 914 936 0.96 21 27 3.8e-05 0.0039 18.7 0.1 1 23 940 962 940 962 0.98 22 27 0.015 1.6 10.4 1.5 1 23 967 990 967 990 0.94 23 27 0.27 28 6.5 2.9 1 23 997 1020 997 1020 0.93 24 27 0.004 0.41 12.3 0.4 3 23 1051 1072 1049 1072 0.93 25 27 0.002 0.21 13.2 1.9 1 23 1078 1100 1078 1100 0.94 26 27 0.00018 0.019 16.5 1.8 1 23 1106 1128 1106 1128 0.99 27 27 7.8e-06 0.00081 20.8 0.3 1 23 1134 1157 1134 1157 0.97
Sequence Information
- Coding Sequence
- ATGAGTAACATATTAACGCCGTTTAAACCGGCAGCGATTAAGAAAGAGCCCGATTATGACTGGACGGTATCCATTAAGAAGCAGAgttttacgaaaaaaacatTGAAGATTGAAACTGTACTACTCCGCGAAATTGATAAGCATCTTCATAACATCAGAGAGATACTTTTACACACAAATGCTACGCCCATTAGATGTCACGATGGTCACGGATACGCTTGCTCATTTTGCTTCGAAAGAAGTTTCCCCGACCCTGCGGACTTGAAGtcgcatgttttattaaaacatactaATTCAGAAAAAATGAAGTTCATGCACAACCACCCGATAGCGTCGTACATAGTCAAACTCGATGTCACATCCCTCCAATGTCTGTTATGTCAGAACAGTATACAGAGTCTAGAGAAGCTGATTAGCCATTTGACACAGGAACACGGTAGAAAGCTGTTTTTAGATATCAACAACCACATCATTCCTTTTTTCTTCGGCAATGAAGGTTTCACCTGCGTCGTGTGttcaaagatttttaaaagtttcaaaattattCAAGAGCATATGAATGTGCATTACGGTAGTTATTTGTGCGGAATATGTAGTGCTCCGTTTGTGAATAACAGGACGTTAAGGAGTCACGTGCGGCGACACAAACAGGGGGACTTTGATTGTCCGGTGTGCGCCAAAGTGTTCGATACTTCTAGCAAGAGAGACGTCCACGTGAAGTTCGTTCATGAGGGCATACAGAAGAGAAACAAATGTCGAATTTGTTTCGAAAAGTTTACGAGTCACAAGAAAAAAATGGATCATATGGTAGAGATGCACGGAGCGGAACCTTTAGTTTTTAAATGTCTGGCTTGTGAGAAGTCTTTCGGTAGTAGAGATCGGCTGACGAAACACACAAGAAAGGATCACTTGATGGAGAGGCGGCATGAGTGCAAACACTGCGAGAAGAAGTTCTTCACGAGTAAAGACTTAAACAACCACATGGTAAAGCATACTGGGATACGGAAGTTTCAGTGCGACGTGTGCCTGAAGTCGTACGGCCGCAAGCACACGCTGCGGGAGCATATGCGGATTCATGCGGACGATAGGCGGTTTAAATGTGAGAGATGTATACGTCTTGTGACAATAAAAAGAATCATTGGATCGGATCTGGCGTTAAAAGTCAACTACAGACGAAAAATACCAGAGGATCAGTTAAGACCAATTCCGGAACTGCATAAACACCGAACCAACATTACATTGATCCTACAACACTCAAATGCGACGCCTTTAAATCGCGGCACCATCGGCTACGGCTGCTGCTATTGCACCGACCAGTTCATGGACCCCGCTGATCTTAAAATCCACACCCTAAAAAATCACGACGACAAAGCCGTGTTTATGGAAGGCACAGTGATGTTCACCTTTCATGTCAAACTagatatcacatttttacaatGCTCCATCTGTGGCGACCTTATCAACTCTTTAGATGAACTCGTCGAGCATCTCATCGAAGTCCACAAGAAAAAgttgtttccgcacttagaaaATCGCATCCTCCCGTTCAAATTCGAAGACGACACGCTGAGATGCGTCATCTGTACGAGCGTCTTCAATAAGTTCAAAGTTCTTGTAGAACACATGAGCACTCACTACAGAAATTACGTGTGCGATGTGTGCGGTGCTGGTTTTGTAACTCTGAAAATGCTAAACAATCaccttaaaaatcataaattaggTGTCTTCCAATGCGATAGCTGCGAGAAAGTTTTCGACACGcttataaaaaagaagaatcatGAGAAATGCGTTCATAAACACTTGAAATGGGTGCATAAATGTGGTTTTTGCTATAAAAGATTTCAGAGTAGCATGTCGAAAGAAAATCATCTCGCTAAGACCCATGGTGTGCAGGCGCCGCGTCGCGAAGTGCCGCGTCCTAAAGTGACGCGTCGCGATGTGGAGTGTCGCGTTTGTAAGAAAACGTTTGCGACCTCAATATCGTTAATGAGTCACATAAAACGAGTTCACTTGATGGAGAAGCCGTATGAGTGCGAAAATTGCGAAATGAAGTTCTTTACGAGTAAAGACTTGCGGAATCATATGGTAAAGCATACTGGGGTACGGGAGTTTCAGTGCGGAGTGTGTCAAAAGTGGTACGGCCGCAAGTACACCCTGCAGGAACATATGCGGATTCATCTAAATGATAAACGGTTCAAATGCGAAGTATGTGGGAAGACCTTCGTGCAGAATCGTGGCATGAAAAGCCACATGCGAGCCATACATGGAAAGTTGCCTCGTAAACGTCTTGCGACAGTAAAAAGAATCATCGGATCGGAACTGGCGTTAAAAGTCAACTACAGACCAGAAATACCGAAGGACCAGTTAAGACCAATTCCGGAACTGCATAAACACCGAACAAACGTTACATTGATCCTACAACACTCCAACGCGACCCCTTTACATCGCGTCGCCATCGGCTACGGCTGCTGCTATTGCAGCGAACAATTCAAGGACCCCGCTAACCTCAAAATCCATACCCTAGAAAATCACGATAACAAGGCCGTGTTTATGGAAGGCACAGTGATGTTCACCttctttgtcaaactagacatCACATTTTTACAATGCTCCGAATGTGGCGAATTTATCAACTCTTTAGAAGAACTCGTCGAGCATCTTATCAAAGTCCACAAGATAATGTTGCATACCGACATCAAAAATCGCATCCTTCCGTTCAAATTCGAAGATGACACGCTGAGATGCGTCGTCTGTACGAGGGTCTTCAATAAATTCAAAGTTCTTGTAGAACACATGAGCTCTCACTACAGAAATTACGTGTGCGATGTGTGCGGTGTAAGTTATGTAACTCCAAAAATGCTAAACAATCACCTTAAATATCACGAATTAGGTGTCTTTCCATGCAATACCTGCGATAAAAATTTTGACACTCTTATGCAAAAGAAAAATCACGAGAAATACGTTCATAGACACTTGAACCGGAGGCATAAATGTgatttttgtgataaaaagtTTCAGAGTGGCATAACGAAAGAAAATCATATGGCCAAGACCCATGGTGTGCCGGCGCCGCCTCGCGAAGTGAAGCATCCCATTGTGCAGCGTCGCGAAACGAAGCATCACGTTGTGCAGCATCGCGATGTGATGTGTCTCGCTTGCGAGAAAACGTTTGCGACTTCAACATTGCTAATGACTCACACAAAACGAGTTCACTTAATGGAAAGGCGGTATGATTGCGAATATTGCGATATGAAATTTTTCACGCGTCAAGACTTAAAAAACCACTCGGTAAAGCATACTGGGATACGGGAGTTTCAGTGCGGAGTGTGTCAAAAGTGGTACAGCCGCAAGCACACGCTGGAAGAGCATATGCGGATCCATCTAAATGATAAACGGTTCAGTTGTGAGATATGTGGGAAGGCCTTCGTGCAGAATCGGGGCATAAAGAAACACATGCAAGTCAAACATGGAAAGTTGGCTCGTGAAAATTGTCAAGAAAACGAGTCGGACTAG
- Protein Sequence
- MSNILTPFKPAAIKKEPDYDWTVSIKKQSFTKKTLKIETVLLREIDKHLHNIREILLHTNATPIRCHDGHGYACSFCFERSFPDPADLKSHVLLKHTNSEKMKFMHNHPIASYIVKLDVTSLQCLLCQNSIQSLEKLISHLTQEHGRKLFLDINNHIIPFFFGNEGFTCVVCSKIFKSFKIIQEHMNVHYGSYLCGICSAPFVNNRTLRSHVRRHKQGDFDCPVCAKVFDTSSKRDVHVKFVHEGIQKRNKCRICFEKFTSHKKKMDHMVEMHGAEPLVFKCLACEKSFGSRDRLTKHTRKDHLMERRHECKHCEKKFFTSKDLNNHMVKHTGIRKFQCDVCLKSYGRKHTLREHMRIHADDRRFKCERCIRLVTIKRIIGSDLALKVNYRRKIPEDQLRPIPELHKHRTNITLILQHSNATPLNRGTIGYGCCYCTDQFMDPADLKIHTLKNHDDKAVFMEGTVMFTFHVKLDITFLQCSICGDLINSLDELVEHLIEVHKKKLFPHLENRILPFKFEDDTLRCVICTSVFNKFKVLVEHMSTHYRNYVCDVCGAGFVTLKMLNNHLKNHKLGVFQCDSCEKVFDTLIKKKNHEKCVHKHLKWVHKCGFCYKRFQSSMSKENHLAKTHGVQAPRREVPRPKVTRRDVECRVCKKTFATSISLMSHIKRVHLMEKPYECENCEMKFFTSKDLRNHMVKHTGVREFQCGVCQKWYGRKYTLQEHMRIHLNDKRFKCEVCGKTFVQNRGMKSHMRAIHGKLPRKRLATVKRIIGSELALKVNYRPEIPKDQLRPIPELHKHRTNVTLILQHSNATPLHRVAIGYGCCYCSEQFKDPANLKIHTLENHDNKAVFMEGTVMFTFFVKLDITFLQCSECGEFINSLEELVEHLIKVHKIMLHTDIKNRILPFKFEDDTLRCVVCTRVFNKFKVLVEHMSSHYRNYVCDVCGVSYVTPKMLNNHLKYHELGVFPCNTCDKNFDTLMQKKNHEKYVHRHLNRRHKCDFCDKKFQSGITKENHMAKTHGVPAPPREVKHPIVQRRETKHHVVQHRDVMCLACEKTFATSTLLMTHTKRVHLMERRYDCEYCDMKFFTRQDLKNHSVKHTGIREFQCGVCQKWYSRKHTLEEHMRIHLNDKRFSCEICGKAFVQNRGIKKHMQVKHGKLARENCQENESD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -