Ahor024735.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- clz9
- Assembly
- GCA_963576865.1
- Location
- OY756405.1:4573862-4575001[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-07 0.00011 22.9 0.0 1 41 8 47 8 50 0.85
Sequence Information
- Coding Sequence
- ATGGCTCCGAGAAAAAATAATTCTCCCGAGCAGTTAGAAAAAGCTGTAGAAGCTGTTAAAAATGGCGAAAAGATTGCAGTTGCTGCGAAACGTTTCGGAGTACCTAGGATTACGCTCCATGATAACATTTCGGGAAAAACAACAATGGGTTGCACTATGGGGCCGAGCACAGTTTTAACTAAAGGGGAGGAAGACATTTTGGAAAAGTGGATATTAGCTTTATATGAAAGACATATTCCATTGACAAAAGATTCGCTATTAGACAgtgtgcaaaaaataataatagatcaaAACAGACCAAATCCTTTTACAAACAGTAGGCCCAGCAAGAAGTGGTTTCAGTCGTTCATAAAGAGATATCCAAACTTGACACAAAAAGTACCAGACAACTTGTCAAGAGCTCGAGATAATGTGTCTGAAAATAACATCAGAACTTGGTTCACTGAGATAGAAAGTTATTTGGatgaaaataactataaaactattttaaacgaCCCACACAGAATATTCAACGCAGACGAGACCGCGTTCTTCTTGTCACCTAAACCTGGTCGAATACTTCCCAAAAAAGGAGATAAACACCCATACAGCAGCTGCGGTGATGAAAAGGACAATCTTACTGTCCTAATTACTGGAAATGCAGCTGGAGACCTAGCCCCTCCAATGatcatatttaattatgaaCGAATTCCTTCAACTGTCGCTGTCAGTGTTCCCGATGAATGGGCAATAGGTAAATCGGAGAGTGGGTGGATGTGTAGTAGCATATTCTATGAATATATGACTGTCTTCAATCCTTGGTTAgagcaaaataatattgaaaaaccGATCTTGTTTTTTGTGGATGGCCACAAATCACACCTGACGCTTCATTTATCAAATTTTTGCTCCAAAAATGGTATTGTAGTCGTTGCTTTGTACCCAAATTCTACGCATCTTCTACAACCGATGGACTTGTCAGTATTCAGACCACTCAAAACACATTGGAAAAAAGCCGTAACGCAATGGAAAATGGAGAACCTGGGCAAAATTCTTCGAAAAGAGAACTTTGCCCCAGTGTTGCAAAAAGCTCTCACAAATGTAACACAAGATTGTATCCAAAACGGATTCCGAGCGGGGGCTTTTTCCATTTGGACCTGA
- Protein Sequence
- MAPRKNNSPEQLEKAVEAVKNGEKIAVAAKRFGVPRITLHDNISGKTTMGCTMGPSTVLTKGEEDILEKWILALYERHIPLTKDSLLDSVQKIIIDQNRPNPFTNSRPSKKWFQSFIKRYPNLTQKVPDNLSRARDNVSENNIRTWFTEIESYLDENNYKTILNDPHRIFNADETAFFLSPKPGRILPKKGDKHPYSSCGDEKDNLTVLITGNAAGDLAPPMIIFNYERIPSTVAVSVPDEWAIGKSESGWMCSSIFYEYMTVFNPWLEQNNIEKPILFFVDGHKSHLTLHLSNFCSKNGIVVVALYPNSTHLLQPMDLSVFRPLKTHWKKAVTQWKMENLGKILRKENFAPVLQKALTNVTQDCIQNGFRAGAFSIWT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01209209;
- 90% Identity
- iTF_01209209;
- 80% Identity
- iTF_00076477;