Ahor012090.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756396.1:6629157-6631658[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9 2.2e+03 -0.4 0.0 19 28 28 37 28 41 0.86 2 2 5.3e-07 0.0002 22.1 0.1 1 35 47 79 47 92 0.82
Sequence Information
- Coding Sequence
- ATGGAGGTGTATAAAGAAATGCACGACAAGCTGATTACAAGAACAAGCTGGAGTCAACGGCGCTGCGAGTCCTGCCGGCGCCTGAGACACGCTGCAGCTAGATACGGACTCGGCGCGCCGGTTTACCACGACAACACAAAAGAGGAAACCATGAAAAAAGCGATTGCTGAAGCGAGAAAGTCTTCTATTAAAAGTGCGGCTAAAAACTATGGTATTCCTTTTAGTACGTTGCAACACTTGCAACGCCGTGTCAAGTCGGGAATTTCTACAAAAAGTCTTGGTAGATTCAAACCAGTATTCACTTTGGAACAAGAAAATGATTTGGCAAATCATTTAAAAGCTTTAGATTCTATGTTTTACGGTTTGTCGAGGAATGAATTTATGGAATTAGCTGGTGGGTATGCCAAGGAACAAAATATACAGGCGCCATTCAAGAATAAAGTTGCTGATGAAGCCCTATACGCCCCATCTGCAGTTTACGAAGTGTCATCTGCACCAGATGAGCAAGGACCTCCATCACCATCGATATTAGCTGAACCAAAAGAACCAGAGGCATCACCCATTCTGGCAACTGTTGATCTAGATGAAATTACTCCGCCTGGTTTGATAACACCACCTATTCTAGCAACTGTTCGACCTGATGAAATTACACCACCAAGTTTAActactccattaaattttattgataaaccAATAACACCATCAGATCTCACTACACCCATACAACTAGAAGAAATAACTCCATCGAGttctaaaattctaaaacaattacATCCCTTATCCCAGCAACAGTTTAAAAAGGCAAATAGAGGTCGAAAAAGACAAACAGCTGCGATTTTAACTAGCACACCTATCAAGTTACAGCaagaagaaaaattaaaaaaagcttCCCTTAAACTTAATCTAGGTGCCTCGGGCTGTGTGCCGTCAGGCTGTGTGCCGGCTGTGTGCCGTCGGTCTATGTGTCGGCTGTGTGCCAACGGGCTGTGTGCCGTCAGGCTGTGTGCTATCTGTGTGCCGTCGGGCTGTGTGTCGGCTATGTGCCATCTGTGTGCCATCTCTGTGCAGACGGGCTGTGTGCCGTCAGGCTGTGTGCGACGGATTAATACTTCAGtaggttaa
- Protein Sequence
- MEVYKEMHDKLITRTSWSQRRCESCRRLRHAAARYGLGAPVYHDNTKEETMKKAIAEARKSSIKSAAKNYGIPFSTLQHLQRRVKSGISTKSLGRFKPVFTLEQENDLANHLKALDSMFYGLSRNEFMELAGGYAKEQNIQAPFKNKVADEALYAPSAVYEVSSAPDEQGPPSPSILAEPKEPEASPILATVDLDEITPPGLITPPILATVRPDEITPPSLTTPLNFIDKPITPSDLTTPIQLEEITPSSSKILKQLHPLSQQQFKKANRGRKRQTAAILTSTPIKLQQEEKLKKASLKLNLGASGCVPSGCVPAVCRRSMCRLCANGLCAVRLCAICVPSGCVSAMCHLCAISVQTGCVPSGCVRRINTSVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -