Ahor014368.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- clz9
- Assembly
- GCA_963576865.1
- Location
- OY756398.1:9404815-9407435[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-07 0.0001 23.1 0.0 1 43 8 50 8 52 0.88 2 2 6.6 2.5e+03 -0.6 0.0 15 24 238 247 233 248 0.79
Sequence Information
- Coding Sequence
- ATGGCACCAAAGAAAAATTACACCCCTGAACAAATTGGGAGAGCATTGGATGCTGTAAGGATGGGAGAAAAGATAAGCACAGCTGCCCTCCGGTTTGGGGTTCCTCGAATAACCTTGCACAACAAGGTGATAGatgGCCACAGATCACATTTAACATTACATCTATCAGATTTTTGCTCCGCAAACGGCATAGAGCTCATTGCTTTGTACCCTAACGCAACCCATATCCTTCAACCAATGGATTTAGCAGTCTTTCGCCCTTTGAAAGTAGCCTGGAGAAAAGAAGTTTCTAAGTGGCAACTGAATAATTTGAGTAAAGTCCTGAAAAAAGATCACTTTGCACCTGTGCTAAAAGACGCTATTAGCGCAATATCACAAGAATGCATTCGGAATGGGTTCAGAGCTGGAGGTTTGCACCCTTTCGGACCGGACTACATTGatatgagtaaaataaataaaaaacatacacaaATTATTGAAAAGGAAGTGGACCCAAAGCAAATAGAATTTGTGAAATACTTGGAAGCTGAGATAGTTGCTGTTTATTCGAGACAAAAGTTAGACTTGTTCAACGCATTATATTGTAAAGACAGGAGCACCGTTGAACATAATATACCAAGTGAAGATGAATCGCTGTTTGTTATCTGGGCCAAAAACAAACAAGAGTCGTTTAATAGTGAAAGGTCTATTCCCCAAATAGATTCAGTAGAAAATCAGCTCTCCACGTCAGAAGCTGCTTCAGATAACACAGAAAGTGAAGTGCAACATTcgacggctattttaaccacgGAGGGTTCTCTGATGTTGGAATCTCAGAAAACATCATCTCTCAAACCACTGGAATGCACTGAAATTGAACCATGCCGAGATTCTTTAGCTTCACCTACAATAAGTGAATTACCTGACCAAATGGAGGACCCGCAACATGAGCAGACAAACCGAATTAGTGTCAAAAATCAAGAATTATCCTGTAGTACACCACCTACGCCACCCCAAACATTCCCAATAAATCAAGCATTCGAAAACCAAATACCGGAATTTGTCCCAAGAACTAATAACACGCAAAGCCCATCAGCAACACCCGAGAGTGCGACAGAAACTACTGCCAGAGTCCATGTACCTGGTGTAACTCCTCAAAAACATCCTTTAGAAGCTGCTTTAGGTGATCCACAACCATCAAAAAGGCACAAAATCCCCTTTGCGAAGCAAGGTACAAAATCTTCTAAACGTCCTCGAAAAAATCTGAAATGCAATAAAAGTGATACAGATTCTGATGATGAACCTTTAAGCAGATTAACAGCAAATACAAACTCTGGCCTGGTAGTTGCTAAAGGACAATTTGTCATAGTTAAGTATGAAGGAGAATATTTTCCTGGAAAAACTGAGGATGTTAACCATAACCAGTATGAAGTAAGTACCATGATATTATCAACTGGAAACTCTTTCAGATGGCCTGACAAGCCTAATAAAATCTGGTACAATGCTGGAGATGTTGTGGAACTTATAAATACCCCGTTGCCTCTTAATAATCGAggcttttacaaaattaaagaaATGGACAAGTATTTGCCAAATATATATACCTAG
- Protein Sequence
- MAPKKNYTPEQIGRALDAVRMGEKISTAALRFGVPRITLHNKVIDGHRSHLTLHLSDFCSANGIELIALYPNATHILQPMDLAVFRPLKVAWRKEVSKWQLNNLSKVLKKDHFAPVLKDAISAISQECIRNGFRAGGLHPFGPDYIDMSKINKKHTQIIEKEVDPKQIEFVKYLEAEIVAVYSRQKLDLFNALYCKDRSTVEHNIPSEDESLFVIWAKNKQESFNSERSIPQIDSVENQLSTSEAASDNTESEVQHSTAILTTEGSLMLESQKTSSLKPLECTEIEPCRDSLASPTISELPDQMEDPQHEQTNRISVKNQELSCSTPPTPPQTFPINQAFENQIPEFVPRTNNTQSPSATPESATETTARVHVPGVTPQKHPLEAALGDPQPSKRHKIPFAKQGTKSSKRPRKNLKCNKSDTDSDDEPLSRLTANTNSGLVVAKGQFVIVKYEGEYFPGKTEDVNHNQYEVSTMILSTGNSFRWPDKPNKIWYNAGDVVELINTPLPLNNRGFYKIKEMDKYLPNIYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -