Ahor030154.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anania hortulata
Gene Symbol
ODC1
Assembly
GCA_963576865.1
Location
OY756410.1:10015982-10024181[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.5e-09 2.8e-06 28.0 0.0 2 34 9 41 8 50 0.90

Sequence Information

Coding Sequence
atgtcaaaaaaacgTCAATATTCTAAAGATGCGATTGACAATGCTCTAAGATATATCCAAAATAAAGAAGGATCAATTCGACAGGCATCTAAACAGTTTGGTGTTCCTAGAAgcagtattaaatttaaaatgcgtaatccgaatacaaaatttaaatctggCCCAGATCCAATACTGACTGAAGACGAAGAAGAAGCTTTATGtcaatttattataaagttggCAAAACGTGGATTTCCTAGGAAGAAAGAGGATATCCAAGTTTGTGTGCAAGACTTTCTTAAGAAGAACCCACGACGAAATCCATTTCGTGATGATAAGCCAGGAGAGGTATGGTTTAAAGCATTCCTCAAACGTCATCCTAACATTTCAATTCGAACTTCAGAAGGAGTTACTAACGCAAGTGCATGTGTCTCGGAACAAGATATTAGGAAATGGTTTGAAGAAATTGGGCTCTATTTCGAAGAAGAAAATCTATTAGAGGTTATTCAAGATCCTACACGAATATTTAATGCGGACGAAACCGGTTTTAATATTTGTCCTAAAACAGGAAAAGTTTTAGCTGAAAAGGGAAGCCAAAACGTCTACGAGATAGAGAAAGGATCAGTAAAGGAAAACATTACTGtcctttttaccttttctgCTGCTGGTCGTGTTTGTGATCCACTAATAATTTACCCTTACAAAAGGATTCCCGATCGGGTAGTTTTGAGCGTGCCACCTGGCTGGGGGATTGGCCGTAGCGATACGGGTTGGATGACTGCAGCGGTCTTTCACGATTACATTAGCAACTGTTTTTACCCCGAATTGCAAAAAAACAACGTTCCTCTACCTGTTATTTTGTTCGTCGACGGACACAAAACCCATTTAACGATAGAGGTCACGGAACTATGTCGAAGCCTGAAGATACATTTGATTGCCCTATACCCCAACTCGACGCGCATATTGCAACCTGCGGACGTTGCAGCTTTTCGTCCAATAAAAGTTGGTTGGAAAAAAGCTTTGCGGGAGTGGTACATCGCACATAACTATCTGACAACCATGTCCAAAGAGACTTTTGCTCCATTATTAAAAACTGTTGTCGATTCTTCGGCTAAAAAGGAGACATTGGTCAATGGATTTCGGGTAGCTGGCTTGTATCCTTTCGAGCCCAATAATGTTGATTATACCAAGTGCATTGCTTCAGCTATCCAGTCAGAAAATACACCAGCAGCGTCAGAGCAGGTTGTGGAACAAAATTTGAATGTGCTGACGTATtcacatttttgtaaaattgttgGTCAGtctattattaataaatgtgaaGCAATAACAGTTTTAACTTTACTCGAAGCTGACGACAATTTTAAAGCGATTTACAAAATTTGGCAAAAATTTAATGGATTATGGGAAAATGAAGAAGAAAACAATAATGAATCAAAAGAACATGATGAACCCTGTTTCCTGCAAATGCAAACCAGTTTTACCTCTATAGAAACCGATCACTTACCACTAGGTCGATTAAACCAGTCAGAAAATGGTGTGGCCTATTTGCAGGAAGTACAAACCAATTCTGTAGAAGCAGATTACTTACCATCAGATCCAACAAATCAGCCAGAAACAGATGTGTGTCGTCTGCAGGAAGTACAAAACAGTTCTACAACAAACTTACTACAACCAGGtccatcaaaaaatattacgcCTTCTAAAAAGGTAAATGTCATTTCGAATATTTCTTTTTCTGAATATATGAGAACAAAACAGCTGCCAAATTCTCCTAAGCGCCAAGGAAAACGTCAGTCAAACCATATGCCGTTTGCTTTGACTTCTGACCACAGCGTAGAAAGATTGAAAGAAAAGCAGTTAAAGAAAGAAACCGAAGAAGCTGCAAAACAGGAAAGAAAGAGATTACGAGAAGAAAAGAAACTGCAAAAAGAAAATAGTATCCTAAAGaagaaaccaaaaataaatatcaaaaagaaAGGAAAAGGTGAAGAAAAAATTACTATGAGAAAGCCATTGAGGAAAGATAAAAGAGATGCTGTGTCGGCAGTGATCAACTCGGCGCTGGAGACGTACTTCGGCGGGTGCGGCGTGCGCGTGATCGCGGAGCCGGGCCGCTACTTCGCCGCCGCCGCCTACACGCTGTTCGCGCTCGTGCACGCCAAGCGAGAGGTGACCGGCACGGACGAGTCGGAACCGCACACGATGTACTTCATGAACGACGGCGTGTACGGCTCCTTCAACTGCGTGCTCTACGACCACCAGCAAGTCTCCGCGCAGCCGCTCATGCCGACGTCGGCCAAGCCGCAGCCGTGCTCGCTGTGGGGCCCGACGTGTGACGGGCTGGACTGCGTGCTGGCGCGCGCACTGCTGCCGGCGCTGGAGCCGGGCGCGTGGCTAGTGTTCCGCGACATGGGCGCCTACACGCTGCCCGTCGCCTCGCCCTTCAACGGGTTCCCCGTGCCGCGCGTGCGCGCCGTCTGCGACCGCCGCGTGTGGTGCTCTATCAAGAACCTGTGGCCGATGACGGAGTCGCACTTCGTGGTGGGGTCGCGCATGACGGGCCCGCAGAcgccgccgccgtcgccgccgcgCGAGCGCGAGCTCACGCAGGTGTTCGTCGAGTGCGCGCTCAAGTGA
Protein Sequence
MSKKRQYSKDAIDNALRYIQNKEGSIRQASKQFGVPRSSIKFKMRNPNTKFKSGPDPILTEDEEEALCQFIIKLAKRGFPRKKEDIQVCVQDFLKKNPRRNPFRDDKPGEVWFKAFLKRHPNISIRTSEGVTNASACVSEQDIRKWFEEIGLYFEEENLLEVIQDPTRIFNADETGFNICPKTGKVLAEKGSQNVYEIEKGSVKENITVLFTFSAAGRVCDPLIIYPYKRIPDRVVLSVPPGWGIGRSDTGWMTAAVFHDYISNCFYPELQKNNVPLPVILFVDGHKTHLTIEVTELCRSLKIHLIALYPNSTRILQPADVAAFRPIKVGWKKALREWYIAHNYLTTMSKETFAPLLKTVVDSSAKKETLVNGFRVAGLYPFEPNNVDYTKCIASAIQSENTPAASEQVVEQNLNVLTYSHFCKIVGQSIINKCEAITVLTLLEADDNFKAIYKIWQKFNGLWENEEENNNESKEHDEPCFLQMQTSFTSIETDHLPLGRLNQSENGVAYLQEVQTNSVEADYLPSDPTNQPETDVCRLQEVQNSSTTNLLQPGPSKNITPSKKVNVISNISFSEYMRTKQLPNSPKRQGKRQSNHMPFALTSDHSVERLKEKQLKKETEEAAKQERKRLREEKKLQKENSILKKKPKINIKKKGKGEEKITMRKPLRKDKRDAVSAVINSALETYFGGCGVRVIAEPGRYFAAAAYTLFALVHAKREVTGTDESEPHTMYFMNDGVYGSFNCVLYDHQQVSAQPLMPTSAKPQPCSLWGPTCDGLDCVLARALLPALEPGAWLVFRDMGAYTLPVASPFNGFPVPRVRAVCDRRVWCSIKNLWPMTESHFVVGSRMTGPQTPPPSPPRERELTQVFVECALK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00076440; iTF_00076441;
90% Identity
-
80% Identity
-