Ahor034246.1
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- -
- Assembly
- GCA_963576865.1
- Location
- OY756416.1:2588896-2589706[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-10 6.7e-08 33.2 0.0 3 37 17 51 15 54 0.95 2 2 4.4 1.6e+03 -0.0 0.0 16 28 111 120 104 123 0.66
Sequence Information
- Coding Sequence
- atgtCTCGTAAATATGAACGCAAGACTCTTCGAGCTTCTTGGAGCGCAGAAGATTTGGATGAAGCAATGCAATGCGTACGAAGTAAAGAAATGGGGGTGAATCAAGCTTCAAAACACTTCAAGATTCCATCTCGAACCTTGAGAAGGCACCTTTTAACAGaaagaGTAGGATTCGCCCCAGAAAGAAAAGACGTGAAAGAAATGGCTTTTCAGCTGGCTAAAAAGCTCAATGTAAAAAACCCATTTTCAGAAGAGTCTGAGTCAGCAGGAAATGTCTGGTTTACTGGATTTATGAATCGCAACCCTGAATTAAGTCAAAGAAAATCGGAAGGATTGTCTTTGTCTCAAGCATATGGTGTCAATCGAGAAGATGTCAAGgatttttttgatttgttagCCACCATTTATGAAGAACATGATTTCTCGAATCACCCTGAAGACGTTTTTAATATGGACGAGTCTGGgatccaaataaataataaaccagGTAAAGTTGTCGCGTCAAAAGGAGCTCGAGATGTATACACTCTCACTAGCTCCGAAAAGGGTGAAAATGTCACCGTAATAGCTTGTTGTAATGGTCTGGGCAACTTTCTTCCACCTGCATTGATCTACAAGGGCACCTACAACAAACCACAATTTTCGGAAGGTCTCCCAATAGGATCACAAGTTTTCATGAACATGAACATCTTATATCAACACAGATTTGTTCATGAAATGGTTTGA
- Protein Sequence
- MSRKYERKTLRASWSAEDLDEAMQCVRSKEMGVNQASKHFKIPSRTLRRHLLTERVGFAPERKDVKEMAFQLAKKLNVKNPFSEESESAGNVWFTGFMNRNPELSQRKSEGLSLSQAYGVNREDVKDFFDLLATIYEEHDFSNHPEDVFNMDESGIQINNKPGKVVASKGARDVYTLTSSEKGENVTVIACCNGLGNFLPPALIYKGTYNKPQFSEGLPIGSQVFMNMNILYQHRFVHEMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00076417;
- 90% Identity
- iTF_00076417;
- 80% Identity
- iTF_00076417;